DY260114
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH60_RICPR (60 kDa chaperonin OS=Rickettsia prowazekii GN=groL PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.307e-11 Identity = 53/159 (33.33%), Postives = 84/159 (52.83%), Query Frame = 1 Query: 130 SLGHAEKITVSKDQTVILLCKACIGHEKLLQWRFTM------ENLQDFP----EESCTKHSYLAAVIKVCGSNKAEVREKKDR-XXXXXXXXXXXXEGVVS--VMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGS-VVSKLLE 564 +LG A+++T+SK+ TVI+ G +K ++ R E D+ +E K S AV+KV G+ + EV+E+KDR EGVV+ ++LL+A + L KL+ N Q+ G++ + AL+ + I +AG +G VV KLLE Sbjct: 316 NLGTAKRVTISKENTVIVDGN---GDKKNIEDRVLQIKSQIAETTSDYDKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLLHASQTLTKLKVENKDQQAGIEIVIEALKDPLKQIVKNAGENGGVVVGKLLE 471 HSP 2 Score: 31.5722 bits (70), Expect = 1.307e-11 Identity = 14/33 (42.42%), Postives = 19/33 (57.58%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFT 100 +N + K +K PGFG+ RKA + DIA T Sbjct: 264 VNRLRGGLKVAAVKAPGFGDRRKAMMEDIAILT 296
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH602_BRAJA (60 kDa chaperonin 2 OS=Bradyrhizobium japonicum GN=groL2 PE=2 SV=2) HSP 1 Score: 58.151 bits (139), Expect = 1.307e-11 Identity = 49/155 (31.61%), Postives = 78/155 (50.32%), Query Frame = 1 Query: 133 LGHAEKITVSKDQTVILL-------CKACIGHEKLLQWRFTMENLQDFPEESCTKHSYLAAVIKVCGSNKAEVREKKDRXXXXXXXXXXXXE-GVV--SVMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGSV-VSKLLE 564 LG A+K+ + K+ T I+ +A + K T + ++ +E K + AVI+V G+ + EV+E+KDR E G++ ++LL A + L ++T N QK GV+ ++ AL IA +AG DGSV V K+LE Sbjct: 317 LGRAKKVMIDKENTTIVSGAGKKADIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGILPGGGVALLRASEHLKGIRTKNDDQKTGVEIVRKALSYPARQIAINAGEDGSVIVGKILE 471 HSP 2 Score: 33.113 bits (74), Expect = 1.307e-11 Identity = 16/36 (44.44%), Postives = 21/36 (58.33%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFTS*Q 109 +N + K +K PGFG+ RKA L+DIA T Q Sbjct: 264 VNRLRGGLKVAAVKAPGFGDRRKAMLQDIAILTGGQ 299
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH60_JANSC (60 kDa chaperonin OS=Jannaschia sp. (strain CCS1) GN=groL PE=3 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 1.308e-11 Identity = 51/165 (30.91%), Postives = 82/165 (49.70%), Query Frame = 1 Query: 133 LGHAEKITVSKDQTVILLCKACIGHEKLLQWRFTM------ENLQDFP----EESCTKHSYLAAVIKVCGSNKAEVREKKDRXXXXXXXXXXXX-EGVV--SVMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGSVVSKLLEGSKPKPLG 588 LG A+++T+SKD+T I+ G++ ++ R E+ D+ +E K + AVIKV G ++ EV+E+KDR EG+V ++L+ K L L+ N Q G+ ++ ALE + IA ++GVDGSVV+ + S G Sbjct: 316 LGTAKRLTISKDETTIV---DGAGNKPEIEARVAQIRQQIEESTSDYDREKLQERVAKLAGGVAVIKVGGMSEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGGKSLAGLEGENADQNAGIAIVRRALEAPLRQIAENSGVDGSVVAGKIRESDDNAFG 477 HSP 2 Score: 32.7278 bits (73), Expect = 1.308e-11 Identity = 16/36 (44.44%), Postives = 21/36 (58.33%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFTS*Q 109 +N + K +K PGFG+ RKA L+DIA T Q Sbjct: 263 VNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQ 298
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH607_BRAJA (60 kDa chaperonin 7 OS=Bradyrhizobium japonicum GN=groL7 PE=3 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.698e-11 Identity = 50/155 (32.26%), Postives = 79/155 (50.97%), Query Frame = 1 Query: 133 LGHAEKITVSKDQTVILL-------CKACIGHEKLLQWRFTMENLQDFPEESCTKHSYLAAVIKVCGSNKAEVREKKDRXXXXXXXXXXXX-EGVV--SVMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGS-VVSKLLE 564 LG A+K+ + K+ T I+ +A +G K T + ++ +E K + AVI+V G+ + EV+EKKDR EG+V ++LL A K + +L AN + G+ + ALE + I+ +AGV+GS VV K+LE Sbjct: 317 LGRAKKVVIDKENTTIVNGAGKKPDIEARVGQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRLTNANDDVQAGINIVLKALEAPIRQISENAGVEGSIVVGKILE 471 HSP 2 Score: 31.9574 bits (71), Expect = 1.698e-11 Identity = 15/36 (41.67%), Postives = 20/36 (55.56%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFTS*Q 109 +N + K +K PGFG+ RKA L D+A T Q Sbjct: 264 VNRLRGGLKVAAVKAPGFGDRRKAMLEDLAILTGGQ 299
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH60_ACIAD (60 kDa chaperonin OS=Acinetobacter sp. (strain ADP1) GN=groL PE=3 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 1.698e-11 Identity = 50/149 (33.56%), Postives = 76/149 (51.01%), Query Frame = 1 Query: 133 LGHAEKITVSKDQTVIL--LCKACIGHEKLLQWRFTMENL-----QDFPEESCTKHSYLAAVIKVCGSNKAEVREKKDRXXXXXXXXXXXXE-GVVSV--MSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGSVV 549 LG A KITVSK+ TVI+ A E++ Q R +E ++ +E K + AVIK+ + + E++EKKDR E GVV+ ++L+ A LD L AN Q +G+ ++ A+E + I +AG + SVV Sbjct: 317 LGTAHKITVSKENTVIVDGAGDANAIAERVQQIRAQIEESTSEYDKEKLQERVAKLAGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGVVAGGGVALVRAVNSLDGLTGANDDQTVGINILRRAIEAPLRQIVSNAGDEPSVV 465 HSP 2 Score: 36.5798 bits (83), Expect = 1.698e-11 Identity = 16/33 (48.48%), Postives = 21/33 (63.64%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFT 100 +N + K C +K PGFG+ RKA L+DIA T Sbjct: 264 VNNMRGIIKVCAVKAPGFGDRRKAMLQDIAILT 296
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH60_RICCK (60 kDa chaperonin OS=Rickettsia canadensis (strain McKiel) GN=groL PE=3 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 2.203e-11 Identity = 53/159 (33.33%), Postives = 83/159 (52.20%), Query Frame = 1 Query: 130 SLGHAEKITVSKDQTVILLCKACIGHEKLLQWRFTM------ENLQDFP----EESCTKHSYLAAVIKVCGSNKAEVREKKDR-XXXXXXXXXXXXEGVVS--VMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGS-VVSKLLE 564 SLG A+++T+SK+ TVI+ G +K ++ R E D+ +E K S AV+KV G+ + EV+E+KDR EGVV+ ++LL+ + L KL+ N Q+ G++ + AL+ + I +AG +G VV KLLE Sbjct: 316 SLGTAKRVTISKENTVIV---DGSGDKKSIEDRVLQIKSQIAETTSDYDKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLLHTSQILTKLKVENKDQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLE 471 HSP 2 Score: 31.5722 bits (70), Expect = 2.203e-11 Identity = 14/33 (42.42%), Postives = 19/33 (57.58%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFT 100 +N + K +K PGFG+ RKA + DIA T Sbjct: 264 VNRLRGGLKVAAVKAPGFGDRRKAMMEDIAILT 296
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH601_BRASB (60 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=groL1 PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 2.203e-11 Identity = 50/155 (32.26%), Postives = 78/155 (50.32%), Query Frame = 1 Query: 133 LGHAEKITVSKDQTVILL-------CKACIGHEKLLQWRFTMENLQDFPEESCTKHSYLAAVIKVCGSNKAEVREKKDRXXXXXXXXXXXX-EGVV--SVMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGS-VVSKLLE 564 LG A+K+ + K+ T I+ +A +G K T + ++ +E K + AVI+V G+ + EV+EKKDR EG+V ++LL A K + ++ N + G+ + ALE V IA +AGV+GS VV K+LE Sbjct: 317 LGRAKKVVIDKENTTIVNGAGKKADIEARVGQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRITNPNSDVQAGINIVLKALEAPVRQIAENAGVEGSLVVGKILE 471 HSP 2 Score: 32.7278 bits (73), Expect = 2.203e-11 Identity = 16/36 (44.44%), Postives = 20/36 (55.56%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFTS*Q 109 +N + K +K PGFG+ RKA L DIA T Q Sbjct: 264 VNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQ 299
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH602_SPHAL (60 kDa chaperonin 2 OS=Sphingopyxis alaskensis GN=groL2 PE=3 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 2.204e-11 Identity = 51/157 (32.48%), Postives = 78/157 (49.68%), Query Frame = 1 Query: 133 LGHAEKITVSKDQTVILL-------CKACIGHEKLLQWRFTMENLQDFPEESCTKHSYLAAVIKVCGSNKAEVREKKDR-XXXXXXXXXXXXEGVV--SVMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGS-VVSKLLEGS 570 LG A+K+ + KD T I+ A I + T + ++ +E K + AVI+V G+ + EV+E+KDR EG++ ++LL A K LD L+ AN Q+ G+ ++ AL IA +AG DG+ +V KLLE S Sbjct: 317 LGRAKKVVIDKDNTTIVDGVGARTDIDARIAQIRQQIDTTTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDALHATRAAVEEGILPGGGIALLRALKALDGLKAANDDQQSGIDIVRRALRAPARQIADNAGEDGAWIVGKLLESS 473 HSP 2 Score: 32.3426 bits (72), Expect = 2.204e-11 Identity = 15/33 (45.45%), Postives = 19/33 (57.58%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFT 100 +N + K +K PGFG+ RKA L DIA T Sbjct: 264 VNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILT 296
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH60_HUMAN (60 kDa heat shock protein, mitochondrial OS=Homo sapiens GN=HSPD1 PE=1 SV=2) HSP 1 Score: 60.077 bits (144), Expect = 2.856e-11 Identity = 54/164 (32.93%), Postives = 80/164 (48.78%), Query Frame = 1 Query: 112 KDFECVSLGHAEKITVSKDQTVILLCKACIGH-EKLLQWRF------TMENLQDFPEESCTKHSYLAAVIKVCGSNKAEVREKKDRXXXXXXXXXXXXE-GVV--SVMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGS-VVSKLLEGS 570 +D + LG ++ V+KD ++L K EK +Q T E ++ E K S AV+KV G++ EV EKKDR E G+V +LL LD L AN QKIG++ I+ L++ IA +AGV+GS +V K+++ S Sbjct: 335 EDVQPHDLGKVGEVIVTKDDAMLLKGKGDKAQIEKRIQEIIEQLDVTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVEEGIVLGGGCALLRCIPALDSLTPANEDQKIGIEIIKRTLKIPAMTIAKNAGVEGSLIVEKIMQSS 498 HSP 2 Score: 30.0314 bits (66), Expect = 2.856e-11 Identity = 12/30 (40.00%), Postives = 19/30 (63.33%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIA 91 LN + + +K PGFG++RK L+D+A Sbjct: 288 LNRLKVGLQVVAVKAPGFGDNRKNQLKDMA 317
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH60_SILPO (60 kDa chaperonin OS=Silicibacter pomeroyi GN=groL PE=3 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 2.860e-11 Identity = 50/153 (32.68%), Postives = 78/153 (50.98%), Query Frame = 1 Query: 133 LGHAEKITVSKDQTVILLCKACIGHEKLLQWRFTM------ENLQDFP----EESCTKHSYLAAVIKVCGSNKAEVREKKDRXXXXXXXXXXXX-EGVV--SVMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGSVVS 552 LG A+KI+++KD+T I+ G + ++ R E D+ +E K + AVI+V G + EV+E+KDR EGVV ++L+ A K L L+ AN Q G+ ++ A+E + IA +AGVDG+VV+ Sbjct: 317 LGTAKKISITKDETTIV---DGAGEKAEIEARVAQIRTQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGVVVGGGVALVQAGKVLADLEGANADQTAGINIVRKAIEAPLRQIAENAGVDGAVVA 466 HSP 2 Score: 32.7278 bits (73), Expect = 2.860e-11 Identity = 16/36 (44.44%), Postives = 21/36 (58.33%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFTS*Q 109 +N + K +K PGFG+ RKA L+DIA T Q Sbjct: 264 VNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQ 299 The following BLAST results are available for this feature:
BLAST of DY260114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260114 ID=DY260114; Name=DY260114; organism=Citrus clementina; type=EST; length=980bpback to top |