DY260127
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: MIRO2_BOVIN (Mitochondrial Rho GTPase 2 OS=Bos taurus GN=RHOT2 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 4.523e-42 Identity = 91/211 (43.13%), Postives = 130/211 (61.61%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELR---RLEIKVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF*CSITP 806 K+SLI + E PE+VP +P D P++VP I+D S + + +L E+ +AD V + Y ++++T+ ++ + W+P + + +VPII+ G K DLR S+E V+ PIM QF EIETCVECSA + + ++FYYAQKAVLHPTAPL+D + + L+P C QAL RIF + D DMD AL+D ELN F F + P Sbjct: 17 KTSLILSLVGEEFPEEVPARAEEITIPADVTPEKVPTHIVDYSETEQTVEELQGEIDKADVVCVVYDVSEEATVEKIRTKWIPLVNGDTKRGPRVPIILVGNKSDLRP---GGSMEAVL-PIMSQFPEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDMDQALSDQELNAFQTSCFGHPLAP 223 HSP 2 Score: 26.9498 bits (58), Expect = 4.523e-42 Identity = 15/34 (44.12%), Postives = 21/34 (61.76%), Query Frame = 1 Query: 877 LPLDGFLFPQALFLEKGPP*NTLGLSRKNFG*GE 978 L LDGFLF LF+++G T + R+ FG G+ Sbjct: 246 LTLDGFLFLNTLFIQRGRHETTWTILRR-FGYGD 278
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: MIRO2_CHICK (Mitochondrial Rho GTPase 2 OS=Gallus gallus GN=RHOT2 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 5.143e-42 Identity = 99/242 (40.91%), Postives = 142/242 (58.68%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELR---RLEIKVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF*CSITPW*NSKA*RGVYQKSTMEGSMALGLTLRWFPF 899 K+SLI A E PE+VPP +P D P++VP I+D S S + + +L EE+ +A+ V + Y +++T+ ++ + W+P + ++PII+ G K DL+ S EV+ PIM QF EIETCVECSA + + ++FYYAQKAVLHPTAPL+D +E+ L+P C +AL RIF + D D + L+D ELN F F + P + V K+T +G GLTL F F Sbjct: 17 KTSLIMALVGEEFPEEVPPRAEEITIPADVTPEKVPTHIVDYSESEQTEDELQEEIAKANVVCVVYDVTKEATIEKIRTKWIPMVNGGAEKGARIPIILVGNKSDLQ----MGSSMEVILPIMNQFSEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEEKQLRPACSRALTRIFNLSDQDNNQILSDDELNYFQKSCFGNPLAPQALEDV-KMVVWKNTTDGVQDNGLTLNGFLF 253
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: MIRO2_XENTR (Mitochondrial Rho GTPase 2 OS=Xenopus tropicalis GN=rhot2 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.001e-41 Identity = 97/242 (40.08%), Postives = 142/242 (58.68%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELR---RLEIKVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF*CSITPW*NSKA*RGVYQKSTMEGSMALGLTLRWFPF 899 K+SLI A E P++VP +P D P+R+P I+D S + + +L EE+ +A+ V + Y T+ ++ S W+P + ++PII+ G K DL+ +S+E ++ PIM QF EIETCVECSA + + +VFYYAQKAVLHPTAPL+D +E+ L+P+C++AL RIF I + D + L+D ELN F F + P + V +K+T +G GLTL F F Sbjct: 17 KTSLIMALVGEEFPDEVPSRAEEITIPADVTPERIPTHIVDYSGVEQTEDELREEIAKANVVCVVYDVTDLETIEKIGSKWIPMVNGNAERNSRLPIILVGNKSDLQC---GSSMESIL-PIMNQFSEIETCVECSAKNLKNISEVFYYAQKAVLHPTAPLYDPEEKQLRPQCKKALTRIFTISEQDNNQILSDEELNFFQQSCFGNPLAPQALEDV-KMVVKKNTADGVRDNGLTLNGFLF 253 HSP 2 Score: 23.483 bits (49), Expect = 1.001e-41 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 877 LPLDGFLFPQALFLEKG 927 L L+GFLF LF+++G Sbjct: 246 LTLNGFLFLNTLFIQRG 262
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: MIRO2_RAT (Mitochondrial Rho GTPase 2 OS=Rattus norvegicus GN=Rhot2 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.411e-40 Identity = 88/211 (41.71%), Postives = 132/211 (62.56%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRRLEI---KVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF*CSITP 806 K+SLI + E PE+VP +P D P++VP I+D S + + + +L EE+ +A+ V + Y ++++T+ ++ + W+P + ++PII+ G K DLR +++E V+ PIM QF EIETCVECSA + + ++FYYAQKAVLHPTAPL+D + + L+P C QAL RIF + D D+D AL+D ELN F F + P Sbjct: 17 KTSLILSLVGEEFPEEVPARAEEITIPADVTPEKVPTHIVDYSEAEQTEEELQEEIHKANVVCVVYDVSEEATIEKIRTKWIPLVNGRTATGPRLPIILVGNKSDLRP---GSTIEAVL-PIMSQFPEIETCVECSAKHLRNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDLDHALSDKELNAFQKSCFGHPLAP 223 HSP 2 Score: 23.8682 bits (50), Expect = 1.411e-40 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 877 LPLDGFLFPQALFLEKG 927 L L+GFLF LF+++G Sbjct: 246 LTLEGFLFLNTLFIQRG 262
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: MIRO2_MOUSE (Mitochondrial Rho GTPase 2 OS=Mus musculus GN=Rhot2 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 8.993e-40 Identity = 87/211 (41.23%), Postives = 130/211 (61.61%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRRLEI---KVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF*CSITP 806 K+SLI + E PE+VP +P D P++VP I+D S + + + +L EE+ +A+ V + Y ++++T+ ++ + W+P + ++PII+ G K DLR +++E V+ PIM QF EIETCVECSA + + ++FYYAQKAVLHPTAPL+D + + L+P C QAL RIF + D D D L+D ELN F F + P Sbjct: 17 KTSLILSLVGEEFPEEVPARAEEITIPADVTPEKVPTHIVDYSEAEQTEEELQEEIHKANVVCVVYDVSEETTIEKIRTKWIPLVNGRTATGPRLPIILVGNKSDLRP---GSTMEAVL-PIMSQFPEIETCVECSAKHLRNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDRDHGLSDEELNAFQKSCFGHPLAP 223 HSP 2 Score: 23.8682 bits (50), Expect = 8.993e-40 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 877 LPLDGFLFPQALFLEKG 927 L L+GFLF LF+++G Sbjct: 246 LTLEGFLFLNTLFIQRG 262
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: MIRO_DROPS (Mitochondrial Rho GTPase OS=Drosophila pseudoobscura pseudoobscura GN=Miro PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 6.951e-39 Identity = 96/259 (37.07%), Postives = 150/259 (57.92%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRR-----LE---------------IKVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF*CSITPW*NSKA*RGVYQKSTMEGSMALGLTLRWFPF 899 K+SLI + +E PE+VPP +P + P++VP +I+D SS + + L E+ +A V + Y+ + +L R++S+WLP +R LE ++ PI++ G K+DL + ++++ V+ IM+ F EIE+CVECSA T+ + ++FYYAQKAVLHPT+PL+ ++Q L P C+++L RIF ICD D D LND ELN F + F + P + + V QK+ +G +TL+ F F Sbjct: 24 KTSLILSLVSEEYPEEVPPRAEEITIPANVTPEQVPTSIVDFSSVEQTEETLGLEINKAHVVCIVYSVDDDDSLDRITSHWLPLIRSKCNATLEGDAETEAETEAAGEGLRKPIVLVGNKIDLI---DYSTMDSVLA-IMEDFPEIESCVECSAKTLHNISEMFYYAQKAVLHPTSPLYIMEDQELTPACKKSLVRIFKICDTDGDNLLNDYELNLFQRRCFNTPLQPQILDEV-KAVIQKNVPDGIYNDAVTLKGFLF 277
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: MIRO_DROME (Mitochondrial Rho GTPase OS=Drosophila melanogaster GN=Miro PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 2.641e-38 Identity = 95/261 (36.40%), Postives = 148/261 (56.70%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELR----------------------RLEIKVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF*CSITPW*NSKA*RGVYQKSTMEGSMALGLTLRWFPF 899 K+SLI + +E PE+VPP +P + P++VP +I+D S+ +++ L E+ +A V + YA + TL R++S+WLP +R R I+ PI++ G K+DL ++++ V+ IM+ + EIE+CVECSA ++ + ++FYYAQKAVLHPT+PL+ +EQ L C+++L RIF ICD D D LND ELN F + F + P + + V QK+ +G +TL+ F F Sbjct: 24 KTSLILSLVSEEYPEEVPPRAEEITIPANVTPEQVPTSIVDFSAVEQSEDALAAEINKAHVVCIVYAVDDDDTLDRITSHWLPLVRAKCNPSLDGEGDAEAEAEGDTQREPIRKPIVLVGNKIDLI---EYSTMDSVLA-IMEDYPEIESCVECSAKSLHNISEMFYYAQKAVLHPTSPLYMMEEQELTSACKKSLVRIFKICDIDGDNLLNDYELNLFQRRCFNTPLQPQILDEV-KAVIQKNVPDGIYNDAVTLKGFLF 279
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: GEM1_GIBZE (Mitochondrial Rho GTPase 1 OS=Gibberella zeae GN=GEM1 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 7.193e-36 Identity = 80/205 (39.02%), Postives = 122/205 (59.51%), Query Frame = 3 Query: 183 KSSLIAAAATES-VPEKVPPVHAPTRLPPDF-YPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRRLEIKVPIIVAGCKLDLRGDHNATSL-EEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF 788 KSSLIA+ + V K+ PV +PP P+ V TI+DTS+ +++ L +E+++ + ++L YA + R++ +W+P R L + VP+++ K DL G + EE + P+M +FRE+++C+ SA V +VF+ QKAV HP APLFD+ E LKP C ALKRIF +CD D DG LN+ E+ +F + F Sbjct: 16 KSSLIASLVKDQFVNNKIQPVLPQITIPPSIGTPENVSTTIVDTSARPQDRTTLRKEIRKCNVILLVYA--DHYSYERVALFWMPYFRSLGVNVPVVLCANKSDLVGQGTTPQVVEEELLPVMAEFREVDSCIRTSARDHRNVNEVFFLCQKAVTHPIAPLFDYKEGHLKPLCINALKRIFYLCDKDQDGYLNEQEMRDFQARCF 218
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: GEM1_NEUCR (Mitochondrial Rho GTPase 1 OS=Neurospora crassa GN=gem-1 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.602e-35 Identity = 83/205 (40.49%), Postives = 122/205 (59.51%), Query Frame = 3 Query: 183 KSSLIAAAATES-VPEKVPPVHAPTRLPPDF-YPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRRLEIKVPIIVAGCKLDLRGDHNATSL-EEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF 788 KSSLIA+ V K+ V +PP P+ V TI+DTS+ +++ L +E+++++ ++L Y+ + R++ +W+P R L + VP+++ K DL D NA + EE M P+M +FREI++C+ SA V +VFY QKAV HP APLFD+ E LKP C AL+RIF + D D DG LND E+ +F K F Sbjct: 17 KSSLIASLVKGVFVANKIQAVLPQVTIPPTTGTPENVTTTIVDTSARPQDRTTLRKEIRKSNVILLVYS--DHYSYERVALFWMPYFRSLGVNVPVVLCANKSDLVSDGNAAQVAEEEMLPVMAEFREIDSCIRTSAKEQKNVIEVFYLCQKAVTHPIAPLFDYKEGQLKPACVDALRRIFFLSDKDQDGYLNDQEMQDFQQKSF 219
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: MIRO_CAEEL (Mitochondrial Rho GTPase OS=Caenorhabditis elegans GN=K08F11.5 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.096e-33 Identity = 76/200 (38.00%), Postives = 121/200 (60.50%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRRL---EIKVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEF 773 K+SL+ + + + VP +P D P+ V +I+D S E++ + E+++A+ + + Y+ +ST+ + + WLP +R+ + P+I+ G K D A + ++++ PIM+ E+ETCVECSA TM V ++FYYAQKAV++PT PL+D D + L R R+AL R+F ICD D DG L+D ELN+F Sbjct: 22 KTSLVMSLLEDEWVDAVPRRLDRVLIPADVTPENVTTSIVDLSIKEEDENWIVSEIRQANVICVVYSVTDESTVDGIQTKWLPLIRQSFGEYHETPVILVGNK----SDGTANNTDKIL-PIMEANTEVETCVECSARTMKNVSEIFYYAQKAVIYPTRPLYDADTKQLTDRARKALIRVFKICDRDNDGYLSDTELNDF 216 HSP 2 Score: 23.0978 bits (48), Expect = 1.096e-33 Identity = 12/28 (42.86%), Postives = 16/28 (57.14%), Query Frame = 1 Query: 877 LPLDGFLFPQALFLEKGPP*NTLGLSRK 960 L L GFL+ LF+E+G T + RK Sbjct: 250 LMLAGFLYLHLLFIERGRHETTWAVLRK 277 The following BLAST results are available for this feature:
BLAST of DY260127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260127 ID=DY260127; Name=DY260127; organism=Citrus clementina; type=EST; length=1141bpback to top |