DY260127
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: MIRO_CAEBR (Mitochondrial Rho GTPase OS=Caenorhabditis briggsae GN=CBG01740 PE=3 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 1.537e-32 Identity = 78/208 (37.50%), Postives = 118/208 (56.73%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRRL---EIKVPIIVAGCKLD--------LRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEF 773 K+SL+ + + + VP +P D P+ V +I+D S E L E+++A+ + + Y+ +T+ R+ WLP +R+ + PII+ G K D L + S +++ PIM+ E+ETCVECSA TM V ++FYYAQKAV++PT PL+D D + L R ++AL R+F ICD D DG L+D ELN+F Sbjct: 22 KTSLVMSLLEDEWVDAVPRRLDRVLIPADVTPENVTTSIVDLSIKEEEDNWLISEMRQANVICVVYSVTDDTTVERIQEKWLPLIRQAFGEYHETPIILVGNKSDGTANNTDKLPSGQSLVSSLQIL-PIMEANTEVETCVECSARTMKNVSEIFYYAQKAVIYPTRPLYDADTKQLTDRAKKALIRVFKICDRDNDGYLSDTELNDF 228 HSP 2 Score: 23.0978 bits (48), Expect = 1.537e-32 Identity = 12/28 (42.86%), Postives = 16/28 (57.14%), Query Frame = 1 Query: 877 LPLDGFLFPQALFLEKGPP*NTLGLSRK 960 L L GFL+ LF+E+G T + RK Sbjct: 262 LMLAGFLYLHLLFIERGRHETTWAVLRK 289
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: GEM1_ASPOR (Mitochondrial Rho GTPase 1 OS=Aspergillus oryzae GN=gem1 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 8.230e-32 Identity = 77/206 (37.38%), Postives = 119/206 (57.77%), Query Frame = 3 Query: 183 KSSLIAAAATES-VPEKVPPVHAPTRLPPDF-YPDRVPVT-IIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRRLEIKVPIIVAGCKLDLRGDHN-ATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF 788 KSSLI + V K+ P+ +PP P+ V T ++DTS+ + + L E+++++ ++L Y+ + R++ +WLP R L + VP+++ K DL DH+ A +EE M P+M +F+EI++C+ SA V + F+ QKAV HP APLFD E LKP AL+RIF + D D DG L+D EL +F ++ F Sbjct: 16 KSSLITSLVKGVFVTNKIQPILPQITIPPTIGTPENVTTTTVVDTSALPQERSNLAREIRKSNVILLVYS--DHYSYERVALFWLPYFRSLGVNVPVVLCANKSDLAADHSEAQVIEEEMLPLMAEFKEIDSCIRTSAREHRNVNEAFFLCQKAVTHPIAPLFDSKESALKPAAVAALQRIFYLSDKDRDGYLSDKELEDFQMRCF 219
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: GEM1_ASPFU (Mitochondrial Rho GTPase 1 OS=Aspergillus fumigatus GN=gem1 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.075e-31 Identity = 77/206 (37.38%), Postives = 118/206 (57.28%), Query Frame = 3 Query: 183 KSSLIAAAATES-VPEKVPPVHAPTRLPPDF-YPDRVPVT-IIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRRLEIKVPIIVAGCKLDLRGDHN-ATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF 788 KSSLI + V K+ PV +PP P+ V T ++DTS+ + + L E+++++ ++L Y+ + R++ +WLP R L + VP+++ K DL DH A +EE M P+M +F+EI++C+ SA V + F+ QKAV HP APLFD E LKP AL+RIF + D D DG L+D E+ +F ++ F Sbjct: 16 KSSLITSLVKGVFVTNKIQPVLPQITIPPTIGTPENVTTTTVVDTSALPQERSNLAREIRKSNVILLVYS--DHYSYERVALFWLPYFRSLGVNVPVVLCANKSDLAADHTEAQVIEEEMLPVMAEFKEIDSCIRTSAREHRNVNEAFFLCQKAVTHPIAPLFDSKESALKPAAVAALQRIFYLSDKDRDGYLSDKEIEDFQMRCF 219
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: GEM1_EMENI (Mitochondrial Rho GTPase 1 OS=Emericella nidulans GN=gem1 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.833e-31 Identity = 75/206 (36.41%), Postives = 118/206 (57.28%), Query Frame = 3 Query: 183 KSSLIAAAATES-VPEKVPPVHAPTRLPPDF-YPDRVPVT-IIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRRLEIKVPIIVAGCKLDLRGDHNATS-LEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF 788 KSSLI + V K+ P+ +PP P+ V T ++DTS+ + + L E+++++ ++L Y+ + R++ +WLP R L + VP+++ K DL DH T +E+ M P+M +F+EI++C+ SA V + F+ QKAV HP APLFD E LKP AL+RIF + D D DG L+D E+ +F ++ F Sbjct: 17 KSSLITSLVKGVFVTNKIQPILPQITIPPTIGTPENVTTTTVVDTSAVPQERSNLAREIRKSNVILLVYS--DHYSYERVALFWLPYFRSLGVNVPVVLCANKSDLAADHTETQVIEDEMLPLMSEFKEIDSCIRTSAREHRNVNEAFFLCQKAVTHPIAPLFDAKESALKPAAVAALQRIFYLSDKDRDGYLSDKEIKDFQMRCF 220
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: GEM1_YARLI (Mitochondrial Rho GTPase 1 OS=Yarrowia lipolytica GN=GEM1 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.776e-26 Identity = 73/211 (34.60%), Postives = 112/211 (53.08%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFY--PDR-VPVTIIDT--SSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRRLEIKVPIIVAGCKLDLRGDHNATSLEEVMG----PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF 788 KSSLI + ++ + + P +P F PD + I+DT S+S L+ E+++A+ + L Y+ + R+S +WLP R L + +PI++ D N+ E ++ PI+++F+EIE+C+ SA + FY QKAV+HP APLFD E LKP AL+R+F + D D DG L+D E+ E VK F Sbjct: 18 KSSLITSLIKDTYVPNIQKLLPPITIPKGFSSSPDAPLSTVIVDTQFSNSPAEAEHLHREIRQANVIWLVYS--DHYSCERVSIFWLPYFRNLGVNLPIVLCANVFDDVDSWNSRDSERIISDEMIPILREFKEIESCIRVSAKLNHNINQAFYLCQKAVMHPIAPLFDAKEGKLKPNAVAALQRVFFLSDRDQDGYLSDQEMLELQVKCF 226
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: GEM1_CANAL (Mitochondrial Rho GTPase 1 OS=Candida albicans GN=GEM1 PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 6.748e-26 Identity = 71/169 (42.01%), Postives = 99/169 (58.58%), Query Frame = 3 Query: 294 TIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRRLEIKVPIIVAGCKLDL----RGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF 788 TIIDTSSS + L +ELKRAD + L Y+ T R+S +W+P R + + +PII+ K DL + + +T+ +E + P++ +F+EIE V CSA V + FY Q+AV HP +P+FD E LKP + LKRIF + D D DG LN EL+E K F Sbjct: 38 TIIDTSSS--DMTNLQKELKRADVIWLVYS--DHYTYERISLHWMPLFRSMGVNLPIILCANKSDLFPKSKSNLKSTNSDEFV-PLINEFKEIEAGVRCSAKNNYNVVEAFYLCQRAVTHPISPIFDAKEGNLKPGAIKPLKRIFWLSDTDQDGYLNFEELSELHKKCF 201
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: GEM1_SCHPO (Mitochondrial Rho GTPase 1 OS=Schizosaccharomyces pombe GN=gem1 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.503e-25 Identity = 73/207 (35.27%), Postives = 112/207 (54.11%), Query Frame = 3 Query: 183 KSSLIAAAATE----SVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRRLEIKVPIIVAGCKL-DLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF 788 KSSLI+A E S+P+ P + P+ PD D V + ++DT S + L E+K+A+ + L Y+ N + R+S +WLP R L + VPI++ K DL ++E M P++ +F+EIE C+ CSA I V ++FY + V++P PL+D E+T++ AL RIF + D + D L+ ELN K F Sbjct: 16 KSSLISALIQEDNVTSIPKVFPIISIPSN--PDSNDD-VSLVLVDTQSDSNEREYLAAEIKKANVICLVYSDNY--SYERVSIFWLPYFRSLGVNVPIVLCENKSEDLDNYQGLHTIEHEMIPLINEFKEIEACILCSALEKINVNELFYMCRACVIYPITPLWDAKERTMRKATIHALSRIFFLIDKNNDDLLSVDELNSLSEKCF 217
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: GEM1_YEAST (Mitochondrial Rho GTPase 1 OS=Saccharomyces cerevisiae GN=GEM1 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 8.249e-24 Identity = 78/225 (34.67%), Postives = 112/225 (49.78%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFY--PDRVP--VTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRRLEIKVPIIVAGCKLDLRGDHNATSL---------------EEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF*CSI 800 KSSLI + + V P +P DF P P +IDTS S + L+ ELK AD + L Y C+ +S +S +WLP R L + +P+I+ K D + NA ++ +E PI+ +F+EI+TC++ SA T + FY Q+A+ HP +PLFD LKP ALKRIF++ D + D L+D E+ K F SI Sbjct: 18 KSSLIVSLTKAEFIPTIQDVLPPISIPRDFSSSPTYSPKNTVLIDTSDS--DLIALDHELKSADVIWLVY-CDHES-YDHVSLFWLPHFRSLGLNIPVILCKNKCDSISNVNANAMVVSENSDDDIDTKVEDEEFIPILMEFKEIDTCIKTSAKTQFDLNQAFYLCQRAITHPISPLFDAMVGELKPLAVMALKRIFLLSDLNQDSYLDDNEILGLQKKCFNKSI 238
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: GEM1_ASHGO (Mitochondrial Rho GTPase 1 OS=Ashbya gossypii GN=GEM1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.077e-23 Identity = 73/219 (33.33%), Postives = 110/219 (50.23%), Query Frame = 3 Query: 183 KSSLIAAAATE----SVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRRLEIKVPIIVAG---------CKLDL----RGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF 788 KSSLIA + ++ + +P V P Y + + ++DT +S + L +ELK AD + L YA + R++ YW+ R L + +P+I+ C+ +L GD +E PI++ F+E+ETC++CSA + V FY Q+A+ HP APLFD LKP QALKRIF++ D D D L+ E+ K F Sbjct: 18 KSSLIACLVKDQFIPNLQDALPAVTIPRDFSASPYSPQNTI-LVDTKNS--DLAGLQKELKNADVIWLVYA--DHDSYERIALYWMMMFRSLGLNLPVILCRNKSDDGIEYCRSNLTAGGEGDCGTIVEDEEFIPILKAFKEVETCIKCSAKNKLNVNQAFYLCQRAITHPLAPLFDARIGELKPLAIQALKRIFVLSDKDQDDYLSSEEIAALQKKCF 231
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: GEM1_KLULA (Mitochondrial Rho GTPase 1 OS=Kluyveromyces lactis GN=GEM1 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.237e-23 Identity = 70/219 (31.96%), Postives = 108/219 (49.32%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVP---VTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRRLEIKVPIIVAGCK-------------LDLRGDHNATSLE-EVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF 788 K+SLIA + + V P +P DF R ++DT +S + L++ELK AD + L Y+ + R++ YW+ R L + +P+++ K +D D +E E PI+++F+E+ETC++ SA V FY Q+ + +P APLFD LKP ALKR+F++ D D DG LND E+ + K F Sbjct: 18 KTSLIACLVKDQFISWLQDVLPPITIPKDFSSSRYSPENTVVVDTGNS--DLATLHKELKNADVIWLVYS--DHDSYERIALYWMMMFRSLGVNLPVVLCRNKCDDEVEFLSSANIMDSDDDQLDNKIEDEEFIPILREFKEVETCIKASAKFKFNVNQAFYLCQRTITNPVAPLFDARIGELKPLGVLALKRVFVLSDMDQDGFLNDDEITKLQKKCF 232 HSP 2 Score: 21.1718 bits (43), Expect = 2.237e-23 Identity = 10/24 (41.67%), Postives = 13/24 (54.17%), Query Frame = 1 Query: 886 DGFLFPQALFLEKGPP*NTLGLSR 957 DGFL ++ EKG T G+ R Sbjct: 273 DGFLVLNKIYAEKGRHETTWGILR 296 The following BLAST results are available for this feature:
BLAST of DY260127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260127 ID=DY260127; Name=DY260127; organism=Citrus clementina; type=EST; length=1141bpback to top |