DY260144

Overview
NameDY260144
Unique NameDY260144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length910
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_PSEHT (Adenine phosphoribosyltransferase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=apt PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 3.908e-37
Identity = 45/92 (48.91%), Postives = 65/92 (70.65%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISRRVFL 378
            I ++I  I D+PK GIMF+D+TTL+ +  AF+ TID F+  YKD+  + + G E+RGFIFG P++ A+G  F+P+RKP KLP EV+ +   L
Sbjct:    9 IKNSITTIADYPKAGIMFRDVTTLMANPDAFKATIDAFIAAYKDQGFTKIIGTESRGFIFGAPLSYALGIPFIPVRKPGKLPREVVRQDYLL 100          

HSP 2 Score: 76.6406 bits (187), Expect = 3.908e-37
Identity = 32/72 (44.44%), Postives = 53/72 (73.61%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGE 580
            ++Y LEYG+D +E+HV A+  G++ L+VDDL+ATGGT+ A I+L++++G    + A V+ LPEL G + + +
Sbjct:   96 QDYLLEYGEDTLELHVDAIVPGDKVLLVDDLLATGGTIEATIKLVQKLGGEATDAAFVVSLPELGGEKRIAK 167          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_VIBVY (Adenine phosphoribosyltransferase OS=Vibrio vulnificus (strain YJ016) GN=apt PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.091e-37
Identity = 49/91 (53.85%), Postives = 69/91 (75.82%), Query Frame = 1
Query:   94 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            IA I ++I+ IPD+PKPGI+F+D+T+LL D +A++ TI L V++YKD   + V G EARGF+FG P+AL +G  FVP+RKP KLP   I++
Sbjct:    6 IAQIQASIKSIPDYPKPGILFRDVTSLLEDAQAYQATIQLLVDKYKDMGFTKVVGTEARGFLFGAPLALQLGVGFVPVRKPGKLPRNTIAQ 96          

HSP 2 Score: 69.3218 bits (168), Expect = 5.091e-37
Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + Y LEYG D +E+H  A+  G++ L+VDDL+ATGGT+ A  +L+ ++G  V   A VI LPE+ G + L
Sbjct:   96 QSYELEYGVDTLEIHTDAIVEGDKVLVVDDLLATGGTIEATTKLIRQLGGVVEHAAFVINLPEIGGDKRL 165          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_VIBVU (Adenine phosphoribosyltransferase OS=Vibrio vulnificus GN=apt PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.091e-37
Identity = 49/91 (53.85%), Postives = 69/91 (75.82%), Query Frame = 1
Query:   94 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            IA I ++I+ IPD+PKPGI+F+D+T+LL D +A++ TI L V++YKD   + V G EARGF+FG P+AL +G  FVP+RKP KLP   I++
Sbjct:    6 IAQIQASIKSIPDYPKPGILFRDVTSLLEDAQAYQATIQLLVDKYKDMGFTKVVGTEARGFLFGAPLALQLGVGFVPVRKPGKLPRNTIAQ 96          

HSP 2 Score: 69.3218 bits (168), Expect = 5.091e-37
Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + Y LEYG D +E+H  A+  G++ L+VDDL+ATGGT+ A  +L+ ++G  V   A VI LPE+ G + L
Sbjct:   96 QSYELEYGVDTLEIHTDAIVEGDKVLVVDDLLATGGTIEATTKLIRQLGGVVEHAAFVINLPEIGGDKRL 165          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_VIBPA (Adenine phosphoribosyltransferase OS=Vibrio parahaemolyticus GN=apt PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 5.091e-37
Identity = 51/91 (56.04%), Postives = 68/91 (74.73%), Query Frame = 1
Query:   94 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            I+ I S+I+ I D+PKPGI+F+D+T+LL D KA++ TI L VERYKD   + V G EARGF+FG P+AL +G  FVP+RKP KLP   I++
Sbjct:    6 ISLIKSSIKSIQDYPKPGILFRDVTSLLEDAKAYQATIGLLVERYKDMGFTKVVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRPTIAQ 96          

HSP 2 Score: 70.0922 bits (170), Expect = 5.091e-37
Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + Y LEYG D +E+H  A+  G++ L+VDDL+ATGGT+ A  +L+ ++G  V   A VI LPE+ G + L
Sbjct:   96 QSYELEYGIDTLEIHTDAIVEGDKVLVVDDLLATGGTIEATTKLIRQLGGEVEHAAFVINLPEIGGDKRL 165          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_MESSB (Adenine phosphoribosyltransferase OS=Mesorhizobium sp. (strain BNC1) GN=apt PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.091e-37
Identity = 45/84 (53.57%), Postives = 58/84 (69.05%), Query Frame = 1
Query:  109 SAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            +AIR IPD+P+PGI+F+DITTLL D +AFR  +D  V  Y    I  +AGIEARGFI G  IA  + + F+P+RK  KLP E +
Sbjct:   11 AAIRTIPDYPRPGILFRDITTLLGDARAFRRAVDELVHPYAGAKIDKIAGIEARGFILGGAIAHQLSSGFIPIRKKGKLPHETV 94          

HSP 2 Score: 83.9593 bits (206), Expect = 5.091e-37
Identity = 39/68 (57.35%), Postives = 50/68 (73.53%), Query Frame = 2
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            YSLEYG D MEMH+ AV  GE+ ++VDDL+ATGGT  AA+RLL ++G  +V    VI+LP+L GR  L
Sbjct:   98 YSLEYGLDEMEMHIDAVSPGEKVILVDDLIATGGTAEAAVRLLRQMGAEIVAACFVIDLPDLGGRAKL 165          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_BRAJA (Adenine phosphoribosyltransferase OS=Bradyrhizobium japonicum GN=apt PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.094e-37
Identity = 44/82 (53.66%), Postives = 57/82 (69.51%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 348
            + +++R IPD+PKPGIMF+DITTLL D +AFR  +D  V  +    I  VAG+EARGFI G  +A  + A FVP+RK  KLP
Sbjct:    7 LKASVRTIPDYPKPGIMFRDITTLLADARAFRRAVDELVNPWAGNKIDKVAGMEARGFIIGGAVAHQLSAGFVPIRKKGKLP 88          

HSP 2 Score: 84.7297 bits (208), Expect = 5.094e-37
Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 2
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLFVPV 601
            YSLEYG D MEMHV A+Q GER ++VDDL+ATGGT   A++LL ++G +VV    +I+LPEL G   L  + + VPV
Sbjct:   96 YSLEYGIDEMEMHVDAIQPGERVILVDDLIATGGTAEGAVKLLRQIGANVVAACFIIDLPELGGAAKL--RAMDVPV 170          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_METFK (Adenine phosphoribosyltransferase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=apt PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 5.096e-37
Identity = 47/86 (54.65%), Postives = 57/86 (66.28%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            I S IR IPD+PKPGI F+DITTLL D    R  +D  VERY    +  V GIE+RGFI G  +A  +G  FVP+RK  KLPG+V+
Sbjct:    3 IKSLIRTIPDYPKPGIQFRDITTLLKDASGLRQVVDALVERYAGAKVDKVVGIESRGFIVGAAVAYELGVGFVPVRKKGKLPGDVL 88          

HSP 2 Score: 77.411 bits (189), Expect = 5.096e-37
Identity = 36/75 (48.00%), Postives = 51/75 (68.00%), Query Frame = 2
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            G +   +Y+LEYG D +E+H  A+   E  L++DDL+ATGGT  AA  L+E++G HV+ECA +I LP+L G   L
Sbjct:   85 GDVLGHDYALEYGTDRVEIHSDAISPDEHVLLLDDLIATGGTAEAAAILIEKLGGHVLECAFIIGLPDLGGERKL 159          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_CLOD6 (Adenine phosphoribosyltransferase OS=Clostridium difficile (strain 630) GN=apt PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.102e-37
Identity = 49/87 (56.32%), Postives = 62/87 (71.26%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            + + IR I DFPKPGI F+D+TTL  D  AF+  +D  VE  KDK++ +V G EARGF+ G P+A A+G  FVP+RKP KLPGEV S
Sbjct:    3 LKNFIRNIDDFPKPGIDFKDVTTLFKDGDAFKYAVDSIVEELKDKDVDLVIGPEARGFLMGTPVAYALGVGFVPIRKPGKLPGEVES 89          

HSP 2 Score: 75.485 bits (184), Expect = 5.102e-37
Identity = 37/75 (49.33%), Postives = 51/75 (68.00%), Query Frame = 2
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            G +   EY LEYG D +E+H  A++ G++  IVDDL+ATGGT+ AA +L+E++G  VV    +IEL  L GRE L
Sbjct:   85 GEVESYEYGLEYGTDTLEIHKDAIKKGQKVAIVDDLLATGGTMEAAAKLVEKLGGEVVSMQFLIELKFLNGREKL 159          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_VIBHB (Adenine phosphoribosyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=apt PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.633e-37
Identity = 50/91 (54.95%), Postives = 69/91 (75.82%), Query Frame = 1
Query:   94 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            I+ I S+I+ I D+PKPGI+F+D+T+LL D KA++ TI+L V+RYKD   + V G EARGF+FG P+AL +G  FVP+RKP KLP   I++
Sbjct:    6 ISLIRSSIKSIQDYPKPGILFRDVTSLLEDAKAYQATINLLVDRYKDMGFTKVVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRPTIAQ 96          

HSP 2 Score: 70.4774 bits (171), Expect = 6.633e-37
Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + Y LEYG D +E+H  A+  G++ L+VDDL+ATGGT+ A  +L+ ++G  V   A VI LPE+ G + L
Sbjct:   96 QSYELEYGVDTLEIHTDAIVEGDKVLVVDDLLATGGTIEATTKLIRQLGGEVEHAAFVINLPEIGGDKRL 165          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_ERWT9 (Adenine phosphoribosyltransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=apt PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 6.633e-37
Identity = 46/82 (56.10%), Postives = 64/82 (78.05%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 348
            + ++I+ IPD+PKPGI+F+D+T+LL D KA+  +I+L VERY+   I+ V G EARGF+FG P+AL +G  FVP+RKP KLP
Sbjct:   11 LKNSIQSIPDYPKPGILFRDVTSLLEDPKAYALSIELLVERYRHAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLP 92          

HSP 2 Score: 74.3294 bits (181), Expect = 6.633e-37
Identity = 34/74 (45.95%), Postives = 49/74 (66.22%), Query Frame = 2
Query:  353 RLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + F E+Y+LEYG D +E+H  A+Q G+  L+VDDL+ATGGT+ A + L+ R G  V + A +I L +L G   L
Sbjct:   94 KTFAEDYALEYGTDTLELHCDAIQPGDVVLVVDDLLATGGTIEATVNLIRRAGGSVKDAAFIINLFDLSGEARL 167          
The following BLAST results are available for this feature:
BLAST of DY260144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_PSEHT3.908e-3748.91Adenine phosphoribosyltransferase OS=Pseudoalterom... [more]
APT_VIBVY5.091e-3753.85Adenine phosphoribosyltransferase OS=Vibrio vulnif... [more]
APT_VIBVU5.091e-3753.85Adenine phosphoribosyltransferase OS=Vibrio vulnif... [more]
APT_VIBPA5.091e-3756.04Adenine phosphoribosyltransferase OS=Vibrio paraha... [more]
APT_MESSB5.091e-3753.57Adenine phosphoribosyltransferase OS=Mesorhizobium... [more]
APT_BRAJA5.094e-3753.66Adenine phosphoribosyltransferase OS=Bradyrhizobiu... [more]
APT_METFK5.096e-3754.65Adenine phosphoribosyltransferase OS=Methylobacill... [more]
APT_CLOD65.102e-3756.32Adenine phosphoribosyltransferase OS=Clostridium d... [more]
APT_VIBHB6.633e-3754.95Adenine phosphoribosyltransferase OS=Vibrio harvey... [more]
APT_ERWT96.633e-3756.10Adenine phosphoribosyltransferase OS=Erwinia tasma... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260144 ID=DY260144; Name=DY260144; organism=Citrus clementina; type=EST; length=910bp
CACTGACTATAACTTGCGTTTTGAGTAGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATG
GAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGA
CGATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTG
AGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCA
GAGCTAAAGGGTCGGGAACCGCTGGGAGAGAAACCACTATTTGTTCCTGT
AAGCTAAACTTGACCTCAGGTTATGGTTTAAATGCAATGTTTGTGGACCA
TATGGGTTTCCAGTCCCTCGGGCTCTGCCCCAAGCTTGAGAACCTCCTAA
AACCCCCCGGGAATAAAAGAGCCGTTTCATTGGCTTTTTTATTTTCATTT
AAGACCTTGGGGAAAGAGTGGTGGGGGAGCCGGGTTCCGTCCGCTTTTGG
TGGGGTTAAAAATGACAGGCTCATCAAAAAAATTCCCCCTTCCCCGGAAA
ACGCTGTATTTGAGGCCTTCCAAATTTCCTGGGAAATCCCTCTTGAACGG
TCTGTGAAGA
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