DY260144

Overview
NameDY260144
Unique NameDY260144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length910
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_FRATT (Adenine phosphoribosyltransferase OS=Francisella tularensis subsp. tularensis GN=apt PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.467e-29
Identity = 45/84 (53.57%), Postives = 57/84 (67.86%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 348
            I S I  +PDFPKPGIMF+DIT LL D +  R T +   +  K+K I  ++VAG E+RGFIFG  +A  +G  FVP+RKP KLP
Sbjct:    6 IKSKIAAVPDFPKPGIMFRDITPLLADPQGLRKTAEAMAQELKNKGIQPTIVAGTESRGFIFGVALAEVLGLGFVPVRKPGKLP 89          

HSP 2 Score: 61.6178 bits (148), Expect = 1.467e-29
Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            +Y LEYG D +E+H  A +  +  L+VDDL+ATGGT  A + L+E+    V     V+EL  L GRE L
Sbjct:   96 KYDLEYGSDSLEIHQDAFKVTDEVLVVDDLLATGGTAKATVDLIEKTQAKVAGLIFVMELDGLGGREVL 164          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_FRATN (Adenine phosphoribosyltransferase OS=Francisella tularensis subsp. novicida (strain U112) GN=apt PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.467e-29
Identity = 45/84 (53.57%), Postives = 57/84 (67.86%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 348
            I S I  +PDFPKPGIMF+DIT LL D +  R T +   +  K+K I  ++VAG E+RGFIFG  +A  +G  FVP+RKP KLP
Sbjct:    6 IKSKIAAVPDFPKPGIMFRDITPLLADPQGLRKTAEAMAQELKNKGIQPTIVAGTESRGFIFGVALAEVLGLGFVPVRKPGKLP 89          

HSP 2 Score: 61.6178 bits (148), Expect = 1.467e-29
Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            +Y LEYG D +E+H  A +  +  L+VDDL+ATGGT  A + L+E+    V     V+EL  L GRE L
Sbjct:   96 KYDLEYGSDSLEIHQDAFKVTDEVLVVDDLLATGGTAKATVDLIEKTQAKVAGLIFVMELDGLGGREVL 164          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_FRATM (Adenine phosphoribosyltransferase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=apt PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.467e-29
Identity = 45/84 (53.57%), Postives = 57/84 (67.86%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 348
            I S I  +PDFPKPGIMF+DIT LL D +  R T +   +  K+K I  ++VAG E+RGFIFG  +A  +G  FVP+RKP KLP
Sbjct:    6 IKSKIAAVPDFPKPGIMFRDITPLLADPQGLRKTAEAMAQELKNKGIQPTIVAGTESRGFIFGVALAEVLGLGFVPVRKPGKLP 89          

HSP 2 Score: 61.6178 bits (148), Expect = 1.467e-29
Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            +Y LEYG D +E+H  A +  +  L+VDDL+ATGGT  A + L+E+    V     V+EL  L GRE L
Sbjct:   96 KYDLEYGSDSLEIHQDAFKVTDEVLVVDDLLATGGTAKATVDLIEKTQAKVAGLIFVMELDGLGGREVL 164          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_FRAT1 (Adenine phosphoribosyltransferase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=apt PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.467e-29
Identity = 45/84 (53.57%), Postives = 57/84 (67.86%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 348
            I S I  +PDFPKPGIMF+DIT LL D +  R T +   +  K+K I  ++VAG E+RGFIFG  +A  +G  FVP+RKP KLP
Sbjct:    6 IKSKIAAVPDFPKPGIMFRDITPLLADPQGLRKTAEAMAQELKNKGIQPTIVAGTESRGFIFGVALAEVLGLGFVPVRKPGKLP 89          

HSP 2 Score: 61.6178 bits (148), Expect = 1.467e-29
Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            +Y LEYG D +E+H  A +  +  L+VDDL+ATGGT  A + L+E+    V     V+EL  L GRE L
Sbjct:   96 KYDLEYGSDSLEIHQDAFKVTDEVLVVDDLLATGGTAKATVDLIEKTQAKVAGLIFVMELDGLGGREVL 164          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_THEM4 (Adenine phosphoribosyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=apt PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.467e-29
Identity = 43/88 (48.86%), Postives = 57/88 (64.77%), Query Frame = 1
Query:  115 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISRRVFL 378
            IR IPDFP+ GI+F+DIT LL + +AF   ID  V + K+   + +   EARGFIFG  +A  +G   VP+RKP KLP +VIS +  L
Sbjct:   12 IRDIPDFPEKGIIFRDITPLLKNPEAFNFAIDQLVNKLKEIEFNTIVAPEARGFIFGGALAYKLGKGLVPVRKPGKLPYKVISEKYSL 99          

HSP 2 Score: 68.5514 bits (166), Expect = 1.467e-29
Identity = 33/77 (42.86%), Postives = 52/77 (67.53%), Query Frame = 2
Query:  353 RLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEK 583
            ++  E+YSLEYG+  ++MH+ A+  GE+ +I DD++ATGGT  A  +L+E+ G  VV  A +IEL  L  R+ L ++
Sbjct:   91 KVISEKYSLEYGEAELQMHIDAISQGEKVIIFDDVLATGGTALALKKLVEKAGGEVVSMAFLIELTYLNPRKLLSKE 167          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_STAES (Adenine phosphoribosyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=apt PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.468e-29
Identity = 38/79 (48.10%), Postives = 53/79 (67.09%), Query Frame = 1
Query:  124 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            + D+P  G+ F+DITT++ + +A+    D  VE  K+KNI +V G EARGFI G P+A ++G  F P+RK  KLP EVI
Sbjct:   10 VKDWPSAGVSFKDITTIMDNGEAYGYATDQIVEYAKEKNIDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVI 88          

HSP 2 Score: 73.559 bits (179), Expect = 1.468e-29
Identity = 36/65 (55.38%), Postives = 49/65 (75.38%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKG 562
            EY+LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ AAI+L+E++G  VV  A +IEL  L G
Sbjct:   91 EYNLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEQLGGIVVGIAFIIELKYLNG 155          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_STAEQ (Adenine phosphoribosyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=apt PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.468e-29
Identity = 38/79 (48.10%), Postives = 53/79 (67.09%), Query Frame = 1
Query:  124 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            + D+P  G+ F+DITT++ + +A+    D  VE  K+KNI +V G EARGFI G P+A ++G  F P+RK  KLP EVI
Sbjct:   10 VKDWPSAGVSFKDITTIMDNGEAYGYATDQIVEYAKEKNIDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVI 88          

HSP 2 Score: 73.559 bits (179), Expect = 1.468e-29
Identity = 36/65 (55.38%), Postives = 49/65 (75.38%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKG 562
            EY+LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ AAI+L+E++G  VV  A +IEL  L G
Sbjct:   91 EYNLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEQLGGIVVGIAFIIELKYLNG 155          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_MAGSA (Adenine phosphoribosyltransferase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=apt PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.468e-29
Identity = 39/86 (45.35%), Postives = 52/86 (60.47%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            I   IR +PDFPKPGI+F DI+TLL    A++  +             V+AGI++RGF+   P+AL +G  FV +RK  KLPGE I
Sbjct:    3 IKDHIRGVPDFPKPGILFYDISTLLAHPDAWQVAMGRMAREIIKFQPDVLAGIDSRGFLVAAPLALKLGCGFVMLRKKGKLPGETI 88          

HSP 2 Score: 75.8702 bits (185), Expect = 1.468e-29
Identity = 33/77 (42.86%), Postives = 52/77 (67.53%), Query Frame = 2
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGE 580
            G     +Y+LEYG D +E+  GA++ G+R +I+DDL+ATGGT++A + LL ++G HV     +I+L  L G++ L E
Sbjct:   85 GETIRHDYALEYGTDTIEIQKGAIEEGKRVVILDDLLATGGTMAAGVELLRKIGAHVTGAGTIIDLAFLPGKQRLKE 161          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_BACWK (Adenine phosphoribosyltransferase OS=Bacillus weihenstephanensis (strain KBAB4) GN=apt PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.469e-29
Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = 1
Query:  115 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I ++PD+PK GI+F+DIT L+ D KA++   D  VE    ++I VV G EARGFI G P++ A+   F P+RK  KLP EVI+
Sbjct:    7 IAIVPDYPKEGIVFKDITPLMNDGKAYKAATDAIVEYANKRDIDVVVGPEARGFIIGCPVSYALEVGFAPVRKLGKLPREVIT 89          

HSP 2 Score: 68.1662 bits (165), Expect = 1.469e-29
Identity = 33/69 (47.83%), Postives = 47/69 (68.12%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            +Y  EYG DV+ +H  A++ G+R LI DDL+ATGGT+ A I+L+E +G  V   A ++EL  L GR+ L
Sbjct:   91 DYGKEYGTDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLVELTYLDGRKML 159          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_ENTFA (Adenine phosphoribosyltransferase OS=Enterococcus faecalis GN=apt PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.469e-29
Identity = 38/82 (46.34%), Postives = 53/82 (64.63%), Query Frame = 1
Query:  115 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            I  IPD+P+ GI+F+DI+ L+ +  A+R+     V+  K+K I +V G EARGFI G P+A  +G  F P+RK  KLP E I
Sbjct:    7 IASIPDYPEKGIVFRDISPLMANGDAYREATKQIVDYAKEKRIDMVVGPEARGFIVGCPVAYELGVGFAPVRKKGKLPRETI 88          

HSP 2 Score: 74.3294 bits (181), Expect = 1.469e-29
Identity = 35/68 (51.47%), Postives = 48/68 (70.59%), Query Frame = 2
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            Y LEYG D + +H  A+  G+R LI DDL+ATGGT+ A I L+E++G  VV CA +IEL +L GR+ +
Sbjct:   92 YDLEYGSDTLTLHKDAITPGQRVLICDDLLATGGTIKATIELVEQLGGIVVGCAFLIELMDLHGRDKI 159          
The following BLAST results are available for this feature:
BLAST of DY260144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_FRATT1.467e-2953.57Adenine phosphoribosyltransferase OS=Francisella t... [more]
APT_FRATN1.467e-2953.57Adenine phosphoribosyltransferase OS=Francisella t... [more]
APT_FRATM1.467e-2953.57Adenine phosphoribosyltransferase OS=Francisella t... [more]
APT_FRAT11.467e-2953.57Adenine phosphoribosyltransferase OS=Francisella t... [more]
APT_THEM41.467e-2948.86Adenine phosphoribosyltransferase OS=Thermosipho m... [more]
APT_STAES1.468e-2948.10Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_STAEQ1.468e-2948.10Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_MAGSA1.468e-2945.35Adenine phosphoribosyltransferase OS=Magnetospiril... [more]
APT_BACWK1.469e-2949.40Adenine phosphoribosyltransferase OS=Bacillus weih... [more]
APT_ENTFA1.469e-2946.34Adenine phosphoribosyltransferase OS=Enterococcus ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260144 ID=DY260144; Name=DY260144; organism=Citrus clementina; type=EST; length=910bp
CACTGACTATAACTTGCGTTTTGAGTAGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATG
GAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGA
CGATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTG
AGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCA
GAGCTAAAGGGTCGGGAACCGCTGGGAGAGAAACCACTATTTGTTCCTGT
AAGCTAAACTTGACCTCAGGTTATGGTTTAAATGCAATGTTTGTGGACCA
TATGGGTTTCCAGTCCCTCGGGCTCTGCCCCAAGCTTGAGAACCTCCTAA
AACCCCCCGGGAATAAAAGAGCCGTTTCATTGGCTTTTTTATTTTCATTT
AAGACCTTGGGGAAAGAGTGGTGGGGGAGCCGGGTTCCGTCCGCTTTTGG
TGGGGTTAAAAATGACAGGCTCATCAAAAAAATTCCCCCTTCCCCGGAAA
ACGCTGTATTTGAGGCCTTCCAAATTTCCTGGGAAATCCCTCTTGAACGG
TCTGTGAAGA
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