DY260144

Overview
NameDY260144
Unique NameDY260144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length910
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_KOSOT (Adenine phosphoribosyltransferase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=apt PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.491e-29
Identity = 42/83 (50.60%), Postives = 55/83 (66.27%), Query Frame = 1
Query:  115 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            IR IPDFPKPGI+F+D+T +L D  AF+  I    E  KD   +++   EARGFIF  P+AL +   FVP+RKP KLP + +S
Sbjct:    7 IRDIPDFPKPGIIFKDVTPMLKDPGAFKVCISSLKELVKDFEFNLIVAPEARGFIFAAPLALELEKGFVPIRKPGKLPYKTVS 89          

HSP 2 Score: 66.2402 bits (160), Expect = 2.491e-29
Identity = 31/69 (44.93%), Postives = 47/69 (68.12%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            EYSLEYG   +EMH  A++ G++ LIVDD++ATGGT+ A   ++E+VG  +     ++EL  L+ R+ L
Sbjct:   91 EYSLEYGTATLEMHTDAIKEGDKVLIVDDVLATGGTMKAIAEMVEKVGGTISGIVSLVELSFLEPRKKL 159          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_ANATD (Adenine phosphoribosyltransferase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=apt PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.239e-29
Identity = 37/69 (53.62%), Postives = 53/69 (76.81%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            EY LEYGKDV+EMH+ A++ G++ +I+DDL+ATGGT  + I+L+E++G  VV  A ++EL  L GRE L
Sbjct:   91 EYELEYGKDVLEMHIDAIKPGQKVVIIDDLLATGGTTLSNIKLVEKLGGEVVGIAYLVELTYLGGRENL 159          

HSP 2 Score: 71.2478 bits (173), Expect = 3.239e-29
Identity = 37/87 (42.53%), Postives = 51/87 (58.62%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            +    R + +FPK GI F DITT+L D  AF+  ID  V   KD +  ++ G E+RGFIFG P+A  +    V +RK  KLP + +S
Sbjct:    3 LKEKFRHVLNFPKEGIDFIDITTVLQDKDAFKYAIDSLVNLVKDLDFELIVGPESRGFIFGAPVAYVLNKGLVLVRKKGKLPYKTVS 89          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_PSEA7 (Adenine phosphoribosyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=apt PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.212e-29
Identity = 36/87 (41.38%), Postives = 56/87 (64.37%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            + S IR +PDFPK G++F+DIT L    +A R T+D FV+RY + + S +  ++ARGF+ G  +A A+    +  RK  KLP +V++
Sbjct:    8 LKSQIRAVPDFPKAGVVFRDITPLFQSPRALRMTVDSFVQRYIEADFSHIGAMDARGFLIGSAVAYALNKPLILFRKQGKLPADVLA 94          

HSP 2 Score: 69.3218 bits (168), Expect = 4.212e-29
Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKG 562
            E Y  EYG+  +E+H  ++  G+  LI DDL+ATGGTL AA  L+ R+G  V E A +I+LPEL G
Sbjct:   95 EAYQTEYGEAFLEVHADSLCEGDSVLIFDDLIATGGTLLAAASLVRRLGARVFEAAAIIDLPELGG 160          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_BACV8 (Adenine phosphoribosyltransferase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=apt PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.220e-29
Identity = 43/86 (50.00%), Postives = 58/86 (67.44%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            + + +R IPDFP PGI+F D+TTL  + +  ++ +D   E YKDK I+ V GIE+RGFI G  +A  +GA FV  RKP KLP EV+
Sbjct:    6 LKANLREIPDFPIPGILFYDVTTLFKNPECLQEILDTLYEMYKDKGITKVVGIESRGFIMGGALAARLGAGFVMARKPGKLPAEVV 91          

HSP 2 Score: 58.9214 bits (141), Expect = 4.220e-29
Identity = 29/72 (40.28%), Postives = 44/72 (61.11%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGE 580
            E Y+ EYG D +++H  A+   +  L+ DDL+ATGGT++A  RL++R G   +    +IEL  L GR+   E
Sbjct:   93 ETYAKEYGTDTIQIHKDAIDENDVVLLHDDLLATGGTMAATHRLVQRCGAKKIFINFIIELGGLNGRKAFPE 164          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT2_METVS (Adenine phosphoribosyltransferase 2 OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=apt2 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-29
Identity = 40/83 (48.19%), Postives = 54/83 (65.06%), Query Frame = 1
Query:  115 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            IR+I DFPK GI F+D+T +L D K+ + T     +  +DKNI V+ G EARGF+FG  +A  +   FVP+RKP KLP +  S
Sbjct:    7 IRIIDDFPKKGISFKDVTPILKDPKSMKHTTKEITKYLEDKNIDVIVGPEARGFLFGILVAQELDLGFVPVRKPGKLPFKTFS 89          

HSP 2 Score: 68.5514 bits (166), Expect = 4.220e-29
Identity = 31/74 (41.89%), Postives = 50/74 (67.57%), Query Frame = 2
Query:  353 RLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + F  +Y+LEYG D +E+H  +++ G+   +VDDL+ATGGT+    +L+E++G +V   + VIEL  L GR+ L
Sbjct:   86 KTFSVDYALEYGLDRLEIHSDSIEKGQNVAVVDDLLATGGTVLGVTKLVEKIGGNVSALSFVIELTNLNGRDKL 159          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_THEMA (Adenine phosphoribosyltransferase OS=Thermotoga maritima GN=apt PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.220e-29
Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 1
Query:  115 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            IR IPDFP+ GI+F+DIT LL + +AF++ ID   E   D+   +V   EARGFI G  +A  +G  FVP+RKP KLP + +
Sbjct:   10 IRDIPDFPQKGIVFRDITPLLRNQEAFKEAIDRMCELVFDREFDLVVAPEARGFILGAAMAYKLGKGFVPVRKPGKLPYKTV 91          

HSP 2 Score: 69.707 bits (169), Expect = 4.220e-29
Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            EEY LEYG + + +H  A++ G++ LIVDD++ATGGT  A IRL++++G  VV  A ++EL  L+ R+ L
Sbjct:   93 EEYQLEYGTEQLHIHEDAIEKGQKVLIVDDVLATGGTAEALIRLVKKLGGEVVSLAFLVELSYLEPRKRL 162          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_GRAFK (Adenine phosphoribosyltransferase OS=Gramella forsetii (strain KT0803) GN=apt PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.222e-29
Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 348
            + S +R I DFPK G+ ++DIT LLLD +A R  + LF++      I  V GIE+RGF F   +A  + A F+P+RKP KLP
Sbjct:    3 LKSYVREIADFPKKGVSYKDITPLLLDPEAMRLAVKLFMKNLPHGKIDKVVGIESRGFFFATMLAEKLNAGFIPVRKPGKLP 84          

HSP 2 Score: 72.4034 bits (176), Expect = 4.222e-29
Identity = 33/74 (44.59%), Postives = 50/74 (67.57%), Query Frame = 2
Query:  353 RLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            R   E Y LEYG D +E+H  A++ GE+ L+ DD++ATGGT +A  +L+E+ G  +V+C  ++EL  LKG + L
Sbjct:   86 RTHKENYDLEYGSDSLEIHEDAIKKGEKVLLHDDVLATGGTAAATCKLIEKCGGEIVQCNFLVELEFLKGVDKL 159          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_TREPS (Adenine phosphoribosyltransferase OS=Treponema pallidum subsp. pallidum (strain SS14) GN=apt PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.476e-29
Identity = 40/89 (44.94%), Postives = 57/89 (64.04%), Query Frame = 1
Query:   97 AGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            A +  AIR   DFPK GI++ DIT +L++   FR  +D  VE Y+D++++ VA IE+RGFIF  P A  +G   + +RK  KLPG+  S
Sbjct:   15 AALDRAIRKRIDFPKKGILYYDITGVLMNAAVFRYCLDQMVEFYRDEHVTAVAAIESRGFIFAAPFADRMGIPLILVRKAGKLPGDTYS 103          

HSP 2 Score: 69.3218 bits (168), Expect = 5.476e-29
Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 2
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPL 589
            G  +   YSLEYGK  +E+H   V AG R L+ DDL+ATGGTL+AA  +L   G  VV    V+ LP L+  E +G+ P+
Sbjct:   99 GDTYSCSYSLEYGKATVEVHKSDVVAGARVLLTDDLIATGGTLNAARTMLRAGGAEVVGFFAVVGLPFLRYHELIGDLPV 178          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_TREPA (Adenine phosphoribosyltransferase OS=Treponema pallidum GN=apt PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.476e-29
Identity = 40/89 (44.94%), Postives = 57/89 (64.04%), Query Frame = 1
Query:   97 AGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            A +  AIR   DFPK GI++ DIT +L++   FR  +D  VE Y+D++++ VA IE+RGFIF  P A  +G   + +RK  KLPG+  S
Sbjct:   15 AALDRAIRKRIDFPKKGILYYDITGVLMNAAVFRYCLDQMVEFYRDEHVTAVAAIESRGFIFAAPFADRMGIPLILVRKAGKLPGDTYS 103          

HSP 2 Score: 69.3218 bits (168), Expect = 5.476e-29
Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 2
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPL 589
            G  +   YSLEYGK  +E+H   V AG R L+ DDL+ATGGTL+AA  +L   G  VV    V+ LP L+  E +G+ P+
Sbjct:   99 GDTYSCSYSLEYGKATVEVHKSDVVAGARVLLTDDLIATGGTLNAARTMLRAGGAEVVGFFAVVGLPFLRYHELIGDLPV 178          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_FRAP2 (Adenine phosphoribosyltransferase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=apt PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.491e-29
Identity = 44/86 (51.16%), Postives = 55/86 (63.95%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGE 354
            I   I  +PDFPKPGI+F+DIT LL D +  + T     E  K K I  +V+AG E+RGFIFG  +A  +G  FVP+RKP KLP E
Sbjct:    6 IKDRIVAVPDFPKPGIVFRDITPLLADPQGLKMTAKAMAEELKSKGIKPTVIAGTESRGFIFGVALAEVLGLGFVPVRKPGKLPRE 91          

HSP 2 Score: 64.6994 bits (156), Expect = 5.491e-29
Identity = 31/68 (45.59%), Postives = 44/68 (64.71%), Query Frame = 2
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            Y LEYG D +E+H  A +  ++ L+VDDL+ATGGT  A ++L+E+    V     VIEL +L GR+ L
Sbjct:   97 YQLEYGSDSLEIHKDAFKPTDKVLVVDDLLATGGTAKATVQLIEKTQASVAGLIFVIELEDLNGRKVL 164          
The following BLAST results are available for this feature:
BLAST of DY260144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_KOSOT2.491e-2950.60Adenine phosphoribosyltransferase OS=Kosmotoga ole... [more]
APT_ANATD3.239e-2953.62Adenine phosphoribosyltransferase OS=Anaerocellum ... [more]
APT_PSEA74.212e-2941.38Adenine phosphoribosyltransferase OS=Pseudomonas a... [more]
APT_BACV84.220e-2950.00Adenine phosphoribosyltransferase OS=Bacteroides v... [more]
APT2_METVS4.220e-2948.19Adenine phosphoribosyltransferase 2 OS=Methanococc... [more]
APT_THEMA4.220e-2948.78Adenine phosphoribosyltransferase OS=Thermotoga ma... [more]
APT_GRAFK4.222e-2946.34Adenine phosphoribosyltransferase OS=Gramella fors... [more]
APT_TREPS5.476e-2944.94Adenine phosphoribosyltransferase OS=Treponema pal... [more]
APT_TREPA5.476e-2944.94Adenine phosphoribosyltransferase OS=Treponema pal... [more]
APT_FRAP25.491e-2951.16Adenine phosphoribosyltransferase OS=Francisella p... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260144 ID=DY260144; Name=DY260144; organism=Citrus clementina; type=EST; length=910bp
CACTGACTATAACTTGCGTTTTGAGTAGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATG
GAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGA
CGATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTG
AGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCA
GAGCTAAAGGGTCGGGAACCGCTGGGAGAGAAACCACTATTTGTTCCTGT
AAGCTAAACTTGACCTCAGGTTATGGTTTAAATGCAATGTTTGTGGACCA
TATGGGTTTCCAGTCCCTCGGGCTCTGCCCCAAGCTTGAGAACCTCCTAA
AACCCCCCGGGAATAAAAGAGCCGTTTCATTGGCTTTTTTATTTTCATTT
AAGACCTTGGGGAAAGAGTGGTGGGGGAGCCGGGTTCCGTCCGCTTTTGG
TGGGGTTAAAAATGACAGGCTCATCAAAAAAATTCCCCCTTCCCCGGAAA
ACGCTGTATTTGAGGCCTTCCAAATTTCCTGGGAAATCCCTCTTGAACGG
TCTGTGAAGA
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