DY260144

Overview
NameDY260144
Unique NameDY260144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length910
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_PSEU2 (Adenine phosphoribosyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=apt PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.052e-28
Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = 1
Query:   97 AGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            +   S IR + DFPKPG++F+DIT L    KA R  ID FV+RY D   S +  ++ARGF+ G  +A  +    V  RK  KLP +V+S
Sbjct:    6 SNFKSLIRPVVDFPKPGVVFRDITPLFQSPKATRQVIDSFVQRYIDAEFSHIGVMDARGFLIGSVVAYQLNKPLVLFRKQGKLPADVLS 94          

HSP 2 Score: 69.3218 bits (168), Expect = 2.052e-28
Identity = 32/72 (44.44%), Postives = 47/72 (65.28%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGE 580
            E Y  EYG+  +E+H  ++  G+  ++ DDL+ATGGTL AA  L+ R+G  V E A +I+LPEL G + L +
Sbjct:   95 EAYQTEYGEAYLEVHADSLCEGDSVVMFDDLIATGGTLIAAANLIRRMGAEVYEAAAIIDLPELGGSKRLND 166          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_MYCAP (Adenine phosphoribosyltransferase OS=Mycoplasma agalactiae (strain PG2) GN=apt PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.057e-28
Identity = 42/84 (50.00%), Postives = 56/84 (66.67%), Query Frame = 1
Query:  115 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            IR + +FPKPGI+F+DI+ LL D +A   TI    E  KD  + V+ G +ARGF+FG P A  +   F+ +RKP KLPG+VISR
Sbjct:    7 IRDVKNFPKPGILFKDISPLLADGEALNYTITSMAEVAKD--VDVIVGPDARGFLFGTPTAAVLKKPFIMVRKPGKLPGKVISR 88          

HSP 2 Score: 66.6254 bits (161), Expect = 2.057e-28
Identity = 28/77 (36.36%), Postives = 50/77 (64.94%), Query Frame = 2
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGE 580
            G++   EY LEYG +++++    ++ G+   IVDD++ATGGT+ A I+LL+  G  + +   ++EL +L GR+ + E
Sbjct:   83 GKVISREYDLEYGNNILQIQADFIKKGQTVAIVDDVLATGGTIKAIIKLLKEQGAIIKKVIILLELTDLNGRDSINE 159          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_CLOCE (Adenine phosphoribosyltransferase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=apt PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.057e-28
Identity = 39/70 (55.71%), Postives = 49/70 (70.00%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            EEY LEYGKD +E+H  A+  GE+ LIVDDL+ATGGT  A I+L+E++G  V      IEL  LKGR+ L
Sbjct:   91 EEYDLEYGKDELEIHSDAIAPGEKVLIVDDLLATGGTTEANIKLVEKLGGEVTGIVYFIELMSLKGRDKL 160          

HSP 2 Score: 69.707 bits (169), Expect = 2.057e-28
Identity = 37/87 (42.53%), Postives = 54/87 (62.07%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVE-RYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            +   +R + DFPK GI F DITT+L D +AFR+ ++ F     K  +  ++ G E+RGFIFG P+A  +   FVP+RK  KLP + +
Sbjct:    3 LKDKLRHVMDFPKEGIDFIDITTVLQDPEAFRECMESFKTLAEKMGDFDLIVGSESRGFIFGAPLAYRMEKGFVPVRKKGKLPYKTV 89          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_SCHPO (Adenine phosphoribosyltransferase OS=Schizosaccharomyces pombe GN=apt1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.669e-28
Identity = 44/94 (46.81%), Postives = 62/94 (65.96%), Query Frame = 1
Query:   85 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            D RI  + + +   PDFPK GI+F+DI  +  D +AF   IDL +E  + +  NI V+ G+EARGF+FGP +AL     FVP+RKP KLPG+++
Sbjct:    3 DDRINYLKNKLVQYPDFPKKGILFEDIMPIFQDPRAFGILIDLLLEAVETEFNNIDVIVGLEARGFLFGPTLALRANCAFVPVRKPNKLPGDLV 96          

HSP 2 Score: 56.9954 bits (136), Expect = 2.669e-28
Identity = 31/75 (41.33%), Postives = 45/75 (60.00%), Query Frame = 2
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            G L    Y+ EY  D   +  G ++ G+R LIVDD++ATGGT  AA  L+ R+G  +V    ++EL  L+GR+ L
Sbjct:   93 GDLVVVSYNKEYSTDSFAIQKGTIKPGQRVLIVDDILATGGTALAADELVTRLGGELVGHLFLLELTFLQGRKRL 167          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_METI4 (Adenine phosphoribosyltransferase OS=Methylacidiphilum infernorum (isolate V4) GN=apt PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.673e-28
Identity = 39/85 (45.88%), Postives = 56/85 (65.88%), Query Frame = 1
Query:   94 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 348
            I  +   IR IPDFP+PG+MF+DIT  + + + FR  + +F+ RY+ K I  +A I+ARGFIF   +A A+G   +P+RK  KLP
Sbjct:    9 IERLKEKIRTIPDFPRPGVMFKDITPAIGEGQFFRLILTIFIARYQKKKIDKIAAIDARGFIFAGALAHALGVGIIPIRKKGKLP 93          

HSP 2 Score: 63.929 bits (154), Expect = 2.673e-28
Identity = 32/74 (43.24%), Postives = 46/74 (62.16%), Query Frame = 2
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLF 592
            Y  EYG++V+ +H  A+  GE  LIVDD++ATG T   A  L+E+ G +++E   + EL  LKGRE L   P +
Sbjct:  101 YKSEYGEEVLTIHQDAISKGENILIVDDVLATGNTARTAALLVEKCGGNLMELGFLAELSNLKGRERLFPFPCY 174          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_SYNJA (Adenine phosphoribosyltransferase OS=Synechococcus sp. (strain JA-3-3Ab) GN=apt PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.675e-28
Identity = 43/85 (50.59%), Postives = 56/85 (65.88%), Query Frame = 1
Query:  115 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTID-LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            IR++PDFPKPGI+F+DIT LL D   FR  I+ L        ++  V GIE+RGFI G  +A  +G  FVP+RKP KLP  V+S+
Sbjct:    7 IRLVPDFPKPGILFRDITPLLRDPAGFRAAIEQLAAGTATMGSLDYVVGIESRGFILGAALAQHLGLGFVPVRKPGKLPPPVLSQ 91          

HSP 2 Score: 66.2402 bits (160), Expect = 2.675e-28
Identity = 32/70 (45.71%), Postives = 49/70 (70.00%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + YSLEYG+D +++H  A++ G+R +IVDD++ATGGT +A  +L+ + G  V   A +IEL  L GR+ L
Sbjct:   91 QSYSLEYGQDQLQLHAHALRPGDRVVIVDDVIATGGTAAATAQLVAQSGAEVGGFAFLIELAFLSGRKLL 160          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_LEUCK (Adenine phosphoribosyltransferase OS=Leuconostoc citreum (strain KM20) GN=apt PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.675e-28
Identity = 34/83 (40.96%), Postives = 53/83 (63.86%), Query Frame = 1
Query:  115 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            +  + +FP+PG+ F+DI+ L+ D  A++  +D   +  KD N+ ++AG E+RGFI G P+A A+   FVP RK  KLP   +S
Sbjct:    9 VATVENFPEPGVNFRDISPLMGDGVAYKQAVDAIADFAKDLNVDLIAGPESRGFIVGSPLAYALNIGFVPARKGGKLPRAAVS 91          

HSP 2 Score: 71.633 bits (174), Expect = 2.675e-28
Identity = 37/77 (48.05%), Postives = 55/77 (71.43%), Query Frame = 2
Query:  371 YSLEYG-KDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLFVP 598
            YSLEYG ++V+E+H  A++ G+R LIVDDL+ATGGT++A   ++E++G  V   A +IEL +L GRE + +    VP
Sbjct:   94 YSLEYGGENVLEIHQDAIKPGQRVLIVDDLLATGGTINATREIIEKLGGIVAGVAFIIELTDLHGREKIMQNGREVP 170          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_PROMM (Adenine phosphoribosyltransferase OS=Prochlorococcus marinus (strain MIT 9313) GN=apt PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.676e-28
Identity = 39/78 (50.00%), Postives = 52/78 (66.67%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLFVPV 601
            +YSLEYG D +E+H  A+Q   R L+VDDL+ATGGT  A + L+E+ G  +V C  VIEL  L GR+ L   P+ +PV
Sbjct:   91 DYSLEYGSDRLEIHADALQGHPRVLLVDDLLATGGTARATVELIEKAGGDLVGCGFVIELAALGGRQQL---PVEIPV 165          

HSP 2 Score: 71.2478 bits (173), Expect = 2.676e-28
Identity = 35/82 (42.68%), Postives = 52/82 (63.41%), Query Frame = 1
Query:  115 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            I+ +PDFPKPGI+F+DI+ LL D   + + +    +   +    ++ GIE+RGFI G  +A      FVP+RKP KLPG+V+
Sbjct:    7 IQDVPDFPKPGILFRDISPLLRDPDGWDEVMRQLGDLCTELKPDLIVGIESRGFIVGTALATNRKIGFVPVRKPGKLPGDVL 88          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_PSESM (Adenine phosphoribosyltransferase OS=Pseudomonas syringae pv. tomato GN=apt PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.478e-28
Identity = 39/89 (43.82%), Postives = 54/89 (60.67%), Query Frame = 1
Query:   97 AGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            +   S IR + DFPKPG++F+DIT L    KA R  ID FV+RY D + S +  ++ARGF+ G  +A  +    V  RK  KLP +V+S
Sbjct:    6 SNFKSLIRPVVDFPKPGVVFRDITPLFQSPKATRQVIDSFVQRYIDADFSHIGVMDARGFLIGSVVAYQLNKPLVLFRKQGKLPADVLS 94          

HSP 2 Score: 68.1662 bits (165), Expect = 3.478e-28
Identity = 32/72 (44.44%), Postives = 46/72 (63.89%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGE 580
            E Y  EYG+  +E+H  ++  G   ++ DDL+ATGGTL AA  L+ R+G  V E A +I+LPEL G + L +
Sbjct:   95 EAYQTEYGEAYLEVHADSLCEGNSVIMFDDLIATGGTLIAAANLIRRMGAQVHEAAAIIDLPELGGSKRLND 166          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_CLAM3 (Adenine phosphoribosyltransferase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=apt PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.482e-28
Identity = 38/75 (50.67%), Postives = 50/75 (66.67%), Query Frame = 2
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            G +  E Y+LEYG+  +E+H G +  G R L++DD++ATGGTL AA RLLER G  V     V+EL +L GRE L
Sbjct:   90 GEVLRETYALEYGEAAIELHPGQLAPGSRVLLLDDVLATGGTLEAAARLLERAGYEVAGIGVVLELADLGGRERL 164          

HSP 2 Score: 69.707 bits (169), Expect = 3.482e-28
Identity = 36/86 (41.86%), Postives = 51/86 (59.30%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            + S +  +PDFP+PGI+F+D+T +L D  A R  +D  V       +  VAG+EARGF+     A A G   + +RK  KLPGEV+
Sbjct:   10 VRSLLLTVPDFPQPGILFRDLTPVLADGPALRAVVDDLVAACGP--VDAVAGVEARGFLLAAAAAYASGVGTLAVRKAGKLPGEVL 93          
The following BLAST results are available for this feature:
BLAST of DY260144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_PSEU22.052e-2843.82Adenine phosphoribosyltransferase OS=Pseudomonas s... [more]
APT_MYCAP2.057e-2850.00Adenine phosphoribosyltransferase OS=Mycoplasma ag... [more]
APT_CLOCE2.057e-2855.71Adenine phosphoribosyltransferase OS=Clostridium c... [more]
APT_SCHPO2.669e-2846.81Adenine phosphoribosyltransferase OS=Schizosacchar... [more]
APT_METI42.673e-2845.88Adenine phosphoribosyltransferase OS=Methylacidiph... [more]
APT_SYNJA2.675e-2850.59Adenine phosphoribosyltransferase OS=Synechococcus... [more]
APT_LEUCK2.675e-2840.96Adenine phosphoribosyltransferase OS=Leuconostoc c... [more]
APT_PROMM2.676e-2850.00Adenine phosphoribosyltransferase OS=Prochlorococc... [more]
APT_PSESM3.478e-2843.82Adenine phosphoribosyltransferase OS=Pseudomonas s... [more]
APT_CLAM33.482e-2850.67Adenine phosphoribosyltransferase OS=Clavibacter m... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260144 ID=DY260144; Name=DY260144; organism=Citrus clementina; type=EST; length=910bp
CACTGACTATAACTTGCGTTTTGAGTAGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATG
GAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGA
CGATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTG
AGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCA
GAGCTAAAGGGTCGGGAACCGCTGGGAGAGAAACCACTATTTGTTCCTGT
AAGCTAAACTTGACCTCAGGTTATGGTTTAAATGCAATGTTTGTGGACCA
TATGGGTTTCCAGTCCCTCGGGCTCTGCCCCAAGCTTGAGAACCTCCTAA
AACCCCCCGGGAATAAAAGAGCCGTTTCATTGGCTTTTTTATTTTCATTT
AAGACCTTGGGGAAAGAGTGGTGGGGGAGCCGGGTTCCGTCCGCTTTTGG
TGGGGTTAAAAATGACAGGCTCATCAAAAAAATTCCCCCTTCCCCGGAAA
ACGCTGTATTTGAGGCCTTCCAAATTTCCTGGGAAATCCCTCTTGAACGG
TCTGTGAAGA
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