DY260155
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260155 vs. ExPASy Swiss-Prot
Match: DCEA_LISMO (Glutamate decarboxylase alpha OS=Listeria monocytogenes GN=gadA PE=3 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 6.605e-35 Identity = 79/181 (43.65%), Postives = 104/181 (57.46%), Query Frame = 2 Query: 17 EKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLPDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFLKRLQSNNCSILSVYTAWL*GLQEHYGKLH 559 EKF Y+ + +N ++ VDE TI + ILG T TG+F+D+ L DL+ N + IHVD ASG PF+ P LEWDFRLP V SIN SGHKYGLVY GVGW++WR K+ LP+ELVF ++YLG PT +NF + + I+ Y +L E Y ++H Sbjct: 164 EKFCVYWDIELREVPMSEEHLSINTDIIMDYVDEYTIGIVGILGITYTGKFDDIMTLNDLVEDYNNTHDNEVVIHVDGASGAMFTPFVEPGLEWDFRLPNVVSINTSGHKYGLVYPGVGWILWRDKEYLPEELVFDVSYLGGHMPTMAINFSR----SASQIIGQYYNFLRFGYEGYRQIH 340
BLAST of DY260155 vs. ExPASy Swiss-Prot
Match: DCE_YEAST (Glutamate decarboxylase OS=Saccharomyces cerevisiae GN=GAD1 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 3.510e-32 Identity = 72/169 (42.60%), Postives = 94/169 (55.62%), Query Frame = 2 Query: 2 CRYALEKFARYFXXXXXXXXXXX-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLPDLLT----KKNEETGWDTPIHVDAASGGFIAPF--------LYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNF 469 C+ ALEKF RYF +++++P + VDENTI ILG+T TG E+V+ + D+L+ K + + D PIH D ASGGFI PF Y W F P V S+N SGHK+GL G+GWV+WR + L DEL F + YLG + TF LNF Sbjct: 191 CQVALEKFTRYFEVECRLVPVSHRSHHMLDPESLWDYVDENTIGCFVILGTTYTGHLENVEKVADVLSQIEAKHPDWSNTDIPIHADGASGGFIIPFGFEKEHMKAYGMERWGFNHPRVVSMNTSGHKFGLTTPGLGWVLWRDESLLADELRFKLKYLGGVEETFGLNF 359 HSP 2 Score: 34.2686 bits (77), Expect = 3.510e-32 Identity = 20/54 (37.04%), Postives = 30/54 (55.56%), Query Frame = 3 Query: 471 SKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARAPREGLENT----GRFEILS 620 S+ Q++ QY+ F+ LG GY+ +N + ARA L N+ G FEI+S Sbjct: 360 SRPGFQVVHQYFNFVSLGHSGYRTQFQNSLFVARAFSFELLNSSKLPGCFEIVS 413
BLAST of DY260155 vs. ExPASy Swiss-Prot
Match: MFNA_METTP (L-tyrosine decarboxylase OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=mfnA PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 2.941e-15 Identity = 37/99 (37.37%), Postives = 56/99 (56.57%), Query Frame = 2 Query: 107 LVDENTICVAAILGSTLTGEFEDVKLLPDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 403 L+D+ T+C+ I G+T G+ + + L +L + P+HVDAA GGF+ PFL D WDFR V+SI + HK G+ G +++R+ D L Sbjct: 154 LIDDRTVCLVGIAGTTEFGQVDPIGDLSELAIENG------IPLHVDAAFGGFVLPFLEKDCMWDFRAEGVQSITIDPHKMGMSPIPAGGLIFRSSDPL 246 HSP 2 Score: 29.6462 bits (65), Expect = 2.941e-15 Identity = 12/46 (26.09%), Postives = 23/46 (50.00%), Query Frame = 3 Query: 423 TSTTLDLINRLSPSTSSKGSSQIIAQYYQFIRLGFEGYKNIMENCM 560 T T ++R + T ++ + A Y + LG +GY+ ++ CM Sbjct: 251 TETYYLTVSRQASLTGTRSGAAAAATYAVIMHLGIDGYRKVVRRCM 296
BLAST of DY260155 vs. ExPASy Swiss-Prot
Match: MFNA_UNCMA (L-tyrosine decarboxylase OS=Uncultured methanogenic archaeon RC-I GN=mfnA PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 3.107e-14 Identity = 39/119 (32.77%), Postives = 66/119 (55.46%), Query Frame = 2 Query: 86 NPVKAVELVDENTICVAAILGSTLTGEFEDVKLLPDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGS 442 +P + L+D+NTI + A+ G+T G+ + ++ + L + D +HVDAA GGF+ PF+ ++DF +P V+SI + HK GL G +++R+ + L L + YL S Sbjct: 146 DPSEMAALIDKNTIALVAVAGTTEFGQIDPIEEIGRLAQEH------DLYLHVDAAFGGFVIPFMDRPAKFDFEIPGVQSITIDPHKMGLSTIPSGGLLYRS-ESLMKVLEINAQYLTS 257 HSP 2 Score: 33.4982 bits (75), Expect = 3.107e-14 Identity = 20/52 (38.46%), Postives = 27/52 (51.92%), Query Frame = 3 Query: 462 STSSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARAPREGLENTGRFEIL 617 S +S S+ + QY LG GY+ I+ CM N R RE LE+ G I+ Sbjct: 268 SGASAASAYAVLQY-----LGRAGYREIVATCMENTRILREQLEDMGMEPII 314
BLAST of DY260155 vs. ExPASy Swiss-Prot
Match: MFNA_THEGJ (L-tyrosine decarboxylase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=mfnA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.570e-12 Identity = 40/110 (36.36%), Postives = 58/110 (52.73%), Query Frame = 2 Query: 77 YVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLPDLLTKKNEETGWDTPIHVDAASGGFIAPFL----YPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 394 Y +N E + +NTI + I G+T G +D+ L DL + P+HVDAA GGF+ PF Y ++DFRL VKSI + HK G+V G +++R + Sbjct: 144 YTVNVRDVEEKITDNTIGIVGIAGTTGLGVVDDIPALSDLALD------YGLPLHVDAAFGGFVIPFAKALGYDIPDFDFRLKGVKSITIDPHKMGMVPIPAGGIIFRER 247 HSP 2 Score: 26.1794 bits (56), Expect = 1.570e-12 Identity = 11/32 (34.38%), Postives = 17/32 (53.12%), Query Frame = 3 Query: 465 TSSKGSSQIIAQYYQFIRLGFEGYKNIMENCM 560 T ++ + +A + LGFEGYK I+ M Sbjct: 271 TGTRPGANALAVWAMIKHLGFEGYKEIVRKAM 302
BLAST of DY260155 vs. ExPASy Swiss-Prot
Match: MFNA_METLZ (L-tyrosine decarboxylase OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=mfnA PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 4.470e-12 Identity = 38/104 (36.54%), Postives = 57/104 (54.81%), Query Frame = 2 Query: 77 YVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLPDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 388 Y ++ K E+VD+NTI V+AI G+T G +DV+ + + + D HVDAA GG + PFL +DF +P V SI++ HK G+ G ++ R Sbjct: 142 YTVDCDKMAEMVDKNTISVSAIAGTTEYGMIDDVERIAKIALEN------DLFFHVDAAFGGMVIPFLPNPAPFDFEVPGVSSISLDPHKMGMSTIPCGCLLLR 239 HSP 2 Score: 28.4906 bits (62), Expect = 4.470e-12 Identity = 15/38 (39.47%), Postives = 22/38 (57.89%), Query Frame = 3 Query: 492 IAQYYQFIRL-GFEGYKNIMENCMGNARAPREGLENTG 602 +A Y I+L G EG++ ++ CM N R EG+E G Sbjct: 271 VAGAYAVIKLLGREGFRAVVAGCMENTRRLIEGMEAFG 308
BLAST of DY260155 vs. ExPASy Swiss-Prot
Match: MFNA_METKA (L-tyrosine decarboxylase OS=Methanopyrus kandleri GN=mfnA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 4.606e-12 Identity = 57/158 (36.08%), Postives = 79/158 (50.00%), Query Frame = 2 Query: 8 YALEKFARYFXXXXXXXXXXXGYYVMNPVKAVE-LVDENTICVAAILGSTLTGEFEDVKLLPDLLTKKNEETGWDTPIHVDAASGGFIAPFL---YPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYL---GSDQPTFT 460 ++ EK AR Y V V AV+ L+ +T + I+G+T TG +D++ L D+ E+ G P+HVDAA GGF APFL YP + F L V S+ V HK GLV G +V+R D+ P + + YL G+ Q T T Sbjct: 107 FSFEKAARMLRMKLVEAPLRSDYTV--DVDAVQDLISRDTALIVGIVGTTETGSVDDIEALSDVA----EDHG--VPLHVDAAFGGFTAPFLREEYPLPRFGFDLEAVVSVTVDPHKMGLVPPPAGGIVFR-DDEFPKAIEVYAPYLSGGGASQYTIT 255
BLAST of DY260155 vs. ExPASy Swiss-Prot
Match: MFNA_ARCFU (L-tyrosine decarboxylase OS=Archaeoglobus fulgidus GN=mfnA PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 7.534e-12 Identity = 33/109 (30.28%), Postives = 57/109 (52.29%), Query Frame = 2 Query: 77 YVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLPDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 403 Y ++ + +L+DENT+ + I G+T G+ + + L L ++ E +HVDAA GG + PF+ +DF+ V SI + HK G+ G +++R + L Sbjct: 133 YKVDVGQVEDLMDENTVAIVGIAGTTELGQIDPIVELSKLAEERQVE------LHVDAAFGGLVIPFMDNPYPFDFQNRGVSSITIDPHKMGMATIPAGGIIFRNESYL 235 HSP 2 Score: 31.5722 bits (70), Expect = 7.534e-12 Identity = 17/60 (28.33%), Postives = 32/60 (53.33%), Query Frame = 3 Query: 465 TSSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARAPREGLENTGRFEILSKDVGRTLS 644 T ++ + + + Y LGFEG + +++NC+ N R E + + G FE + + V +S Sbjct: 254 TGTRPGTGVASAYAVLKSLGFEGMREVVKNCLKNTRILVEEMRDLG-FEPVIEPVMNVVS 312
BLAST of DY260155 vs. ExPASy Swiss-Prot
Match: MFNA_METHJ (L-tyrosine decarboxylase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=mfnA PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 9.782e-12 Identity = 35/93 (37.63%), Postives = 49/93 (52.69%), Query Frame = 2 Query: 77 YVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLPDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL 355 Y M A EL+D+NT C+ + G+T G + + L L ++ +HVDAA GG++ PFL +DF +P V SI V HK GL Sbjct: 141 YRMKTDAAGELIDKNTCCIVGVAGTTEYGMTDPIPALGKLAEQEGVH------LHVDAAFGGYVLPFLDDAPPFDFSVPGVGSIAVDPHKMGL 227 HSP 2 Score: 31.9574 bits (71), Expect = 9.782e-12 Identity = 17/55 (30.91%), Postives = 27/55 (49.09%), Query Frame = 3 Query: 465 TSSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARAPREGLENTGRFEILSKDV 629 T ++ + + A Y LG +G K ++ CM N R EG+E G ++ DV Sbjct: 262 TGTRPGASVAAAYAVMAYLGRKGMKALVTGCMENTRRMIEGMEAFGVHRKVTPDV 316
BLAST of DY260155 vs. ExPASy Swiss-Prot
Match: MFNA_PYRKO (L-tyrosine decarboxylase OS=Pyrococcus kodakaraensis GN=mfnA PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.268e-11 Identity = 39/110 (35.45%), Postives = 57/110 (51.82%), Query Frame = 2 Query: 77 YVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLPDLLTKKNEETGWDTPIHVDAASGGFIAPFL----YPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 394 Y +N + + + TI + I G+T G +D+ L DL + P+HVDAA GGF+ PF Y ++DFRL VKSI + HK G+V G +++R K Sbjct: 144 YTVNVKDVEKKITDRTIGIVGIAGTTGLGVVDDIPALSDLALD------YGLPLHVDAAFGGFVIPFAKALGYEIPDFDFRLKGVKSITIDPHKMGMVPIPAGGIIFREK 247 HSP 2 Score: 25.409 bits (54), Expect = 1.268e-11 Identity = 11/36 (30.56%), Postives = 20/36 (55.56%), Query Frame = 3 Query: 465 TSSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNAR 572 T ++ + +A + LGF+GYK +++ M AR Sbjct: 271 TGTRPGANALAVWAMIKHLGFDGYKEVVKEKMELAR 306 The following BLAST results are available for this feature:
BLAST of DY260155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260155 ID=DY260155; Name=DY260155; organism=Citrus clementina; type=EST; length=1204bpback to top |