DY260156
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA_NOTVI (Tubulin alpha chain OS=Notophthalmus viridescens PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.758e-39 Identity = 74/84 (88.10%), Postives = 80/84 (95.24%), Query Frame = 1 Query: 256 CPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 507 CPTGFK GINYQPPT VPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEK Sbjct: 347 CPTGFKVGINYQPPTAVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEK 430
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA_HAECO (Tubulin alpha chain OS=Haemonchus contortus PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.758e-39 Identity = 75/84 (89.29%), Postives = 80/84 (95.24%), Query Frame = 1 Query: 256 CPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 507 CPTGFK GINYQPPTVVPGGDLAKV RAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 347 CPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA3_BOVIN (Tubulin alpha-3 chain OS=Bos taurus GN=TUBA3 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.758e-39 Identity = 75/84 (89.29%), Postives = 80/84 (95.24%), Query Frame = 1 Query: 256 CPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 507 CPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHK DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 347 CPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKLDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA3_MAIZE (Tubulin alpha-3 chain OS=Zea mays GN=TUBA3 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.296e-39 Identity = 77/84 (91.67%), Postives = 80/84 (95.24%), Query Frame = 1 Query: 256 CPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 507 CPTGFKCGINYQ PTVVPG DLAKVQRAVCMISN+T+V EVFSRI+ KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 347 CPTGFKCGINYQAPTVVPGADLAKVQRAVCMISNSTSVVEVFSRINSKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA_OCTVU (Tubulin alpha chain (Fragment) OS=Octopus vulgaris PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.916e-39 Identity = 76/84 (90.48%), Postives = 80/84 (95.24%), Query Frame = 1 Query: 256 CPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 507 CPTGFK GINYQPPTVV GGDLAKVQRAVCM+SN TAVAE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 136 CPTGFKVGINYQPPTVVLGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 219
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA_EUPVA (Tubulin alpha chain OS=Euplotes vannus PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.916e-39 Identity = 77/81 (95.06%), Postives = 79/81 (97.53%), Query Frame = 1 Query: 265 GFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 507 GFK GINYQPPTVVPGGDLAKV RAVCMISN+TA+AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 349 GFKVGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 429
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBAN_GUITH (Tubulin alpha chain, nucleomorph OS=Guillardia theta GN=tubA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.114e-39 Identity = 74/84 (88.10%), Postives = 81/84 (96.43%), Query Frame = 1 Query: 256 CPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 507 CPTGFKCGINYQPPTVVP GDLAKV RAVCMISN+TA++EVFSRI+ KFDLMY+KRAFVHWYVGEGMEEGEF+EARED+AALEK Sbjct: 347 CPTGFKCGINYQPPTVVPDGDLAKVDRAVCMISNSTAISEVFSRINKKFDLMYSKRAFVHWYVGEGMEEGEFNEAREDMAALEK 430
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA1B_PANTR (Tubulin alpha-1B chain OS=Pan troglodytes GN=TUBA1B PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 6.679e-39 Identity = 74/84 (88.10%), Postives = 80/84 (95.24%), Query Frame = 1 Query: 256 CPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 507 CPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKF LMYAKRAFVHWYVGEGMEEGEFSEARED+AALEK Sbjct: 347 CPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFVLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEK 430
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA3_HOMAM (Tubulin alpha-3 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 8.724e-39 Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 1 Query: 256 CPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 507 CPTGFK GINYQPPT VPGGDLAKV RAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALEK Sbjct: 347 CPTGFKVGINYQPPTAVPGGDLAKVSRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEK 430
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA2_CAEEL (Tubulin alpha-2 chain OS=Caenorhabditis elegans GN=tba-2 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 8.724e-39 Identity = 74/84 (88.10%), Postives = 80/84 (95.24%), Query Frame = 1 Query: 256 CPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 507 CPTGFK GINYQPPTVVPGGDLAKV RAVCM+SN TA+AE +SR+D+KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALEK Sbjct: 345 CPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEK 428 The following BLAST results are available for this feature:
BLAST of DY260156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260156 ID=DY260156; Name=DY260156; organism=Citrus clementina; type=EST; length=778bpback to top |