DY260156
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA1_HOMAM (Tubulin alpha-1 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.488e-38 Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 1 Query: 256 CPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 507 CPTGFK GINYQPPTVVPG DLAKV RAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALEK Sbjct: 347 CPTGFKVGINYQPPTVVPGADLAKVSRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEK 430
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA5_CHICK (Tubulin alpha-5 chain OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.943e-38 Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 1 Query: 256 CPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 507 CPTGFK GINYQPPTVV GGDLAKVQR VCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEK Sbjct: 347 CPTGFKVGINYQPPTVVAGGDLAKVQRIVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDIAALEK 430
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA3E_HUMAN (Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E PE=1 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 3.315e-38 Identity = 74/84 (88.10%), Postives = 79/84 (94.05%), Query Frame = 1 Query: 256 CPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 507 CPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+ HKFDLMYAK AFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 347 CPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLVHKFDLMYAKWAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA4_CHICK (Tubulin alpha-4 chain (Fragment) OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.385e-38 Identity = 72/84 (85.71%), Postives = 79/84 (94.05%), Query Frame = 1 Query: 256 CPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 507 CPTG K GINYQPPTVVPGGDLA+VQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYV EGMEEGEF+EAREDLAALEK Sbjct: 222 CPTGVKVGINYQPPTVVPGGDLAQVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVSEGMEEGEFAEAREDLAALEK 305
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA2_CHICK (Tubulin alpha-2 chain OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 8.165e-37 Identity = 70/84 (83.33%), Postives = 77/84 (91.67%), Query Frame = 1 Query: 256 CPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 507 CPTGFK GINYQPP PGGDLA+VQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYV EGMEEGEF+EAREDLAALEK Sbjct: 344 CPTGFKVGINYQPPIPTPGGDLAQVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVSEGMEEGEFAEAREDLAALEK 427
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA2_HOMAM (Tubulin alpha-2 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.376e-36 Identity = 70/84 (83.33%), Postives = 76/84 (90.48%), Query Frame = 1 Query: 256 CPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 507 CPTGFK GINYQPPTVVPG DLAKV RAVCM+SN TA+AE ++R+DHK DLMYAKRAFVHWYVGEGMEE +FSEAREDLA LEK Sbjct: 347 CPTGFKVGINYQPPTVVPGADLAKVSRAVCMLSNTTAIAEAWARLDHKVDLMYAKRAFVHWYVGEGMEERQFSEAREDLATLEK 430
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA1_PNECA (Tubulin alpha chain OS=Pneumocystis carinii GN=TUB1 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.052e-36 Identity = 69/84 (82.14%), Postives = 76/84 (90.48%), Query Frame = 1 Query: 256 CPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 507 CPTGFK G+ YQPP VP GDLAKV RAVCM+SN T++AE +SR+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 347 CPTGFKLGVCYQPPQYVPNGDLAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBAL3_MOUSE (Tubulin alpha chain-like 3 OS=Mus musculus GN=Tubal3 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.011e-35 Identity = 67/84 (79.76%), Postives = 76/84 (90.48%), Query Frame = 1 Query: 256 CPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 507 CPTGFK GINYQPP VVPGGDLA+VQRAVCM+SN TA+ E ++R+DHKFDLMYAK+AF+HWY+ EGME GEF EAREDLAALEK Sbjct: 354 CPTGFKVGINYQPPAVVPGGDLARVQRAVCMLSNTTAIVEAWARLDHKFDLMYAKKAFLHWYITEGMELGEFVEAREDLAALEK 437
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA1_EMENI (Tubulin alpha-1 chain OS=Emericella nidulans GN=tubA PE=3 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 4.480e-35 Identity = 68/84 (80.95%), Postives = 75/84 (89.29%), Query Frame = 1 Query: 256 CPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 507 CPTGFK GI YQPP VP GDLAKV RAVCM+SN TA++E +S +DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+ Sbjct: 347 CPTGFKIGICYQPPQQVPNGDLAKVNRAVCMLSNTTAISEAWSALDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALER 430
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA8_CAEEL (Tubulin alpha-8 chain OS=Caenorhabditis elegans GN=tba-8 PE=2 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 7.642e-35 Identity = 67/84 (79.76%), Postives = 75/84 (89.29%), Query Frame = 1 Query: 256 CPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 507 CPTGFK GINYQ P V GGDLAKV RAVCM+SN TA+AE ++R+DHKFDLMY+KRAFVHW+VGEGMEEGEF EAR+DLAALEK Sbjct: 350 CPTGFKVGINYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEK 433 The following BLAST results are available for this feature:
BLAST of DY260156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260156 ID=DY260156; Name=DY260156; organism=Citrus clementina; type=EST; length=778bpback to top |