DY260156
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA6_NAEGR (Tubulin alpha-6 chain OS=Naegleria gruberi GN=TUBA6 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.469e-26 Identity = 54/83 (65.06%), Postives = 69/83 (83.13%), Query Frame = 1 Query: 259 PTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 507 P FK G+N Q PTV+P + A+V+R+ MISNNTA+++VF R++ KFDL+YAKRA+VH +V EGMEEGEF+EAREDLAALEK Sbjct: 346 PCAFKIGVNSQKPTVLPDSEFAQVERSCAMISNNTAISQVFERMNDKFDLLYAKRAYVHHFVSEGMEEGEFAEAREDLAALEK 428
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA_AJECA (Tubulin alpha chain (Fragment) OS=Ajellomyces capsulata GN=TUB1 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.106e-25 Identity = 53/71 (74.65%), Postives = 62/71 (87.32%), Query Frame = 1 Query: 259 PTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEF 471 PTGFK GI YQPPT+VP GDLAKV RA CM+SN TA++E ++ + HKFDL+Y+KRAFVHWYVGEGMEEGEF Sbjct: 349 PTGFKIGICYQPPTMVPNGDLAKVNRA-CMLSNTTAISEAWTALSHKFDLIYSKRAFVHWYVGEGMEEGEF 418
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA1_ENTHI (Tubulin alpha-1 chain OS=Entamoeba histolytica GN=TUB1 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.597e-24 Identity = 50/83 (60.24%), Postives = 62/83 (74.70%), Query Frame = 1 Query: 256 CPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 504 CP FKCGIN QP T VPG A R+ CMI+N+TA+ +VF +++ FDLM+ KRAFVH YVGEGMEE EF++AR+DL LE Sbjct: 353 CPCSFKCGINSQPATAVPGSSYASTARSACMIANHTAMCQVFQKVNQNFDLMFGKRAFVHHYVGEGMEENEFTDARQDLYELE 435
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA_DICPU (Tubulin alpha chain (Fragment) OS=Dictyostelium purpureum GN=tuba PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.927e-24 Identity = 52/73 (71.23%), Postives = 62/73 (84.93%), Query Frame = 1 Query: 259 PTGFKCGINYQPPTVVPG--GD-LAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGE 468 PTGFKCGIN PT V G GD +A+ +++VCM+SN TA+++VFSRI+HKFDLMY KRAFVHWYVGEGMEEGE Sbjct: 259 PTGFKCGINNSKPTTVLGENGDNMARTEKSVCMLSNTTAISQVFSRINHKFDLMYIKRAFVHWYVGEGMEEGE 331
BLAST of DY260156 vs. ExPASy Swiss-Prot
Match: TBA_ENCHE (Tubulin alpha chain (Fragment) OS=Encephalitozoon hellem GN=TUB1 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.312e-15 Identity = 36/60 (60.00%), Postives = 49/60 (81.67%), Query Frame = 1 Query: 256 CPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVH 435 CPTGFK GIN + PTV+ G +A+V RAVC +SN TA++E + R+++KFDLM++KRAFVH Sbjct: 321 CPTGFKVGINSRKPTVLDGEAMAEVSRAVCALSNTTAISEAWKRLNNKFDLMFSKRAFVH 380 The following BLAST results are available for this feature:
BLAST of DY260156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260156 ID=DY260156; Name=DY260156; organism=Citrus clementina; type=EST; length=778bpback to top |