DY260160
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260160 vs. ExPASy Swiss-Prot
Match: RS9_DICDI (40S ribosomal protein S9 OS=Dictyostelium discoideum GN=rps9 PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 3.749e-62 Identity = 100/148 (67.57%), Postives = 128/148 (86.49%), Query Frame = 1 Query: 115 VETCGRYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGSLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRR 558 ++ G +GL+ K E+WRVQYAL++IR AAR+LL LDEK+P+RIFEG ALLRR+H+ G +EES+NKLDY+L L V++F+ERRLQTLVFK+G+AKSIHHARVLI+ RHIRVG+QLVN+PSF+VRV+SQKH+ + TSP GGRPGR R+ Sbjct: 25 LKVVGEFGLKNKNEVWRVQYALAKIRKAARELLVLDEKDPKRIFEGSALLRRLHKLGVMEESKNKLDYILNLKVQDFMERRLQTLVFKNGLAKSIHHARVLIKGRHIRVGKQLVNVPSFLVRVESQKHLGLASTSPLAGGRPGRRARK 172 HSP 2 Score: 46.2098 bits (108), Expect = 3.749e-62 Identity = 19/29 (65.52%), Postives = 24/29 (82.76%), Query Frame = 2 Query: 53 NYGKTFKKPRRPYEKERLDAELRLVGDMG 139 NY KT PRRP+EKER+DAEL++VG+ G Sbjct: 4 NYSKTSHTPRRPFEKERIDAELKVVGEFG 32
BLAST of DY260160 vs. ExPASy Swiss-Prot
Match: RS9A_SCHPO (40S ribosomal protein S9-A OS=Schizosaccharomyces pombe GN=rps9a PE=1 SV=2) HSP 1 Score: 216.083 bits (549), Expect = 6.371e-62 Identity = 102/150 (68.00%), Postives = 130/150 (86.67%), Query Frame = 1 Query: 115 VETCGRYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGSLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRRNI 564 ++ G YGLR K E+WRV LS+IR AAR+LLTLDEK+P+R+FEG A++RR+ R G L+E++ KLDYVLAL +E+FLERRLQT VFK G+AKSIHHARVLI QRHIRVG+Q+VN+PSFVVR+D+QKHI+F+L+SP+GGGRPGR KR+ + Sbjct: 28 LKLAGEYGLRNKHEIWRVALTLSKIRRAARELLTLDEKDPKRLFEGNAIIRRLVRLGILDETRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHARVLIFQRHIRVGKQIVNVPSFVVRLDTQKHIDFALSSPYGGGRPGRCKRKRL 177 HSP 2 Score: 42.3578 bits (98), Expect = 6.371e-62 Identity = 18/30 (60.00%), Postives = 22/30 (73.33%), Query Frame = 2 Query: 50 RNYGKTFKKPRRPYEKERLDAELRLVGDMG 139 R KT+K PRRP+E RLDAEL+L G+ G Sbjct: 6 RKQSKTYKVPRRPFESARLDAELKLAGEYG 35
BLAST of DY260160 vs. ExPASy Swiss-Prot
Match: RS9B_YEAST (40S ribosomal protein S9-B OS=Saccharomyces cerevisiae GN=RPS9B PE=1 SV=4) HSP 1 Score: 209.149 bits (531), Expect = 1.180e-60 Identity = 100/149 (67.11%), Postives = 126/149 (84.56%), Query Frame = 1 Query: 115 VETCGRYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGSLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRRN 561 ++ G +GL+ KRE++R+ + LS+IR AARDLLT DEK+P+R+FEG AL+RR+ R G L E + KLDYVLAL VE+FLERRLQT V+K G+AKS+HHARVLI QRHI VG+Q+VNIPSF+VR+DS+KHI+F+ TSPFGG RPGRV RRN Sbjct: 28 LKLAGEFGLKNKREIYRISFQLSKIRRAARDLLTRDEKDPKRLFEGNALIRRLVRVGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVRLDSEKHIDFAPTSPFGGARPGRVARRN 176 HSP 2 Score: 45.0542 bits (105), Expect = 1.180e-60 Identity = 18/30 (60.00%), Postives = 22/30 (73.33%), Query Frame = 2 Query: 50 RNYGKTFKKPRRPYEKERLDAELRLVGDMG 139 R Y KT+ P+RPYE RLDAEL+L G+ G Sbjct: 6 RTYSKTYSTPKRPYESSRLDAELKLAGEFG 35
BLAST of DY260160 vs. ExPASy Swiss-Prot
Match: RS9A_YEAST (40S ribosomal protein S9-A OS=Saccharomyces cerevisiae GN=RPS9A PE=1 SV=3) HSP 1 Score: 207.994 bits (528), Expect = 2.614e-60 Identity = 99/149 (66.44%), Postives = 126/149 (84.56%), Query Frame = 1 Query: 115 VETCGRYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGSLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRRN 561 ++ G +GL+ K+E++R+ + LS+IR AARDLLT DEK+P+R+FEG AL+RR+ R G L E + KLDYVLAL VE+FLERRLQT V+K G+AKS+HHARVLI QRHI VG+Q+VNIPSF+VR+DS+KHI+F+ TSPFGG RPGRV RRN Sbjct: 28 LKLAGEFGLKNKKEIYRISFQLSKIRRAARDLLTRDEKDPKRLFEGNALIRRLVRVGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVRLDSEKHIDFAPTSPFGGARPGRVARRN 176 HSP 2 Score: 45.0542 bits (105), Expect = 2.614e-60 Identity = 18/30 (60.00%), Postives = 22/30 (73.33%), Query Frame = 2 Query: 50 RNYGKTFKKPRRPYEKERLDAELRLVGDMG 139 R Y KT+ P+RPYE RLDAEL+L G+ G Sbjct: 6 RTYSKTYSTPKRPYESSRLDAELKLAGEFG 35
BLAST of DY260160 vs. ExPASy Swiss-Prot
Match: RS9_CAEEL (40S ribosomal protein S9 OS=Caenorhabditis elegans GN=rps-9 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.616e-60 Identity = 99/146 (67.81%), Postives = 129/146 (88.36%), Query Frame = 1 Query: 127 GRYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGSLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRRNI 564 G +GL+ KRE+WRV+Y L+++R AAR+LLTL++K+P+R+FEG ALLRR+ + G L+E++ KLDYVL L VE+FLERRLQT VFK G+AKSIHHAR+LI+Q HIRV RQ+V++PSF+VR+DSQKHI+FSL SP+GGGRPGRVKRR + Sbjct: 32 GTFGLKNKREVWRVKYTLAKVRKAARELLTLEDKDPKRLFEGNALLRRLVKIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARILIKQHHIRVRRQVVDVPSFIVRLDSQKHIDFSLQSPYGGGRPGRVKRRTL 177 HSP 2 Score: 40.4318 bits (93), Expect = 2.616e-60 Identity = 17/26 (65.38%), Postives = 20/26 (76.92%), Query Frame = 2 Query: 62 KTFKKPRRPYEKERLDAELRLVGDMG 139 K K PRRP+EKERLD EL+L+G G Sbjct: 10 KVTKSPRRPFEKERLDQELKLIGTFG 35
BLAST of DY260160 vs. ExPASy Swiss-Prot
Match: RS9_TRYBB (Probable 40S ribosomal protein S9 OS=Trypanosoma brucei brucei PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 2.143e-51 Identity = 95/147 (64.63%), Postives = 120/147 (81.63%), Query Frame = 1 Query: 115 VETCGRYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGSLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKR 555 ++ CG+YGLRCKRE+WRV LS++R AR LLTL E +PRR+ EG A++RR H YG L+E ++KLDYVL+LTV + LERRLQT+VFK G+AKS+HH+RVLI+QRHI V +Q+V IPSF+VRV S+ HI F+ SPFG GRPGRVKR Sbjct: 27 MKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGSAIMRRCHGYGFLDEDKDKLDYVLSLTVPDILERRLQTVVFKHGLAKSVHHSRVLIQQRHIAVAKQIVTIPSFIVRVSSEHHIAFADASPFGNGRPGRVKR 173
BLAST of DY260160 vs. ExPASy Swiss-Prot
Match: RS9_NAEFO (40S ribosomal protein S9 OS=Naegleria fowleri GN=RPS9 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 4.654e-50 Identity = 89/151 (58.94%), Postives = 118/151 (78.15%), Query Frame = 1 Query: 115 VETCGRYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGSLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFS-LTSPFGGGRPGRVKRRNI 564 ++ CG+YGL+ K+E+WR+QY L+R R AR LLTL E + +R FEG ALLRRM R G L+ES+ +LDY+L+L E+ LERRLQT+V K G++KSIHHAR LI QRHIRVG+Q VN+PSF+VRVDS+KHI S ++ GG+PGR+ R+ + Sbjct: 30 LKMCGKYGLKNKQEIWRLQYYLARARKTARHLLTLPEDDMKRQFEGAALLRRMTRLGLLDESKQQLDYILSLKTEDLLERRLQTVVQKLGLSKSIHHARQLIFQRHIRVGKQTVNVPSFIVRVDSEKHINMSPFSALVQGGKPGRMTRKKL 180 HSP 2 Score: 39.2762 bits (90), Expect = 4.654e-50 Identity = 18/37 (48.65%), Postives = 23/37 (62.16%), Query Frame = 2 Query: 29 MVHVSFYRNYGKTFKKPRRPYEKERLDAELRLVGDMG 139 MV YR + K PRRP+EKER+D EL++ G G Sbjct: 1 MVQNRCYRVHSKVSLPPRRPFEKERMDRELKMCGKYG 37
BLAST of DY260160 vs. ExPASy Swiss-Prot
Match: RS9_ENTHI (40S ribosomal protein S9 OS=Entamoeba histolytica GN=2.t00127 PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 1.073e-42 Identity = 77/146 (52.74%), Postives = 106/146 (72.60%), Query Frame = 1 Query: 127 GRYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGSLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGR-PGRVKRRN 561 G++GL+ K+E+ RV Y L +R A+ +L D K+P+R+ EG ALLRR+H G L QNKL++VLAL EN LERRLQTLV++ G AKSIHHARVLIR + I+VG+Q+V++PSF+VRV+S+ I+ + +P GR KR+N Sbjct: 32 GQFGLKNKKEIQRVHYMLGHMRTIAKVMLMKDAKDPKRLLEGAALLRRLHNLGILPRDQNKLEFVLALKEENLLERRLQTLVYRKGFAKSIHHARVLIRGKMIKVGKQVVDVPSFLVRVESEPLIQLADNTPLTNPEINGRRKRKN 177 HSP 2 Score: 43.1282 bits (100), Expect = 1.073e-42 Identity = 18/30 (60.00%), Postives = 23/30 (76.67%), Query Frame = 2 Query: 50 RNYGKTFKKPRRPYEKERLDAELRLVGDMG 139 RN+ T+K P+ PYE+ER DAEL+LVG G Sbjct: 6 RNHSITYKTPKVPYERERFDAELKLVGQFG 35
BLAST of DY260160 vs. ExPASy Swiss-Prot
Match: RS9_PIG (40S ribosomal protein S9 (Fragment) OS=Sus scrofa GN=RPS9 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.975e-39 Identity = 69/100 (69.00%), Postives = 84/100 (84.00%), Query Frame = 1 Query: 127 GRYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGSLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQ 426 G YGLR KRE+WRV++ L++IR AAR+LLTLDEK+PRR+FEG ALLRR+ R G L+E + KLDY+L L +E+FLERRLQT VFK G+A SIHH RVLIRQ Sbjct: 31 GEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAXSIHHXRVLIRQ 130 HSP 2 Score: 40.0466 bits (92), Expect = 3.975e-39 Identity = 16/26 (61.54%), Postives = 21/26 (80.77%), Query Frame = 2 Query: 62 KTFKKPRRPYEKERLDAELRLVGDMG 139 KT+ PRRP+EK RLD EL+L+G+ G Sbjct: 9 KTYVTPRRPFEKSRLDQELKLIGEYG 34
BLAST of DY260160 vs. ExPASy Swiss-Prot
Match: RS9_ENCCU (40S ribosomal protein S9 OS=Encephalitozoon cuniculi GN=RPS9 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.453e-24 Identity = 62/143 (43.36%), Postives = 89/143 (62.24%), Query Frame = 1 Query: 127 GRYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRI-FEGEALLRRMHRYGSL--------EESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFG 528 G YGL+ K ELW ++ ++ + AR LLT NP I G +LLRR+ +YG L +E N L+ VL LT+ ++LERRLQ VF +G+AKS+HHAR+LI R I + Q+V++P F+VR D + IE++ S +G Sbjct: 30 GVYGLKNKHELWVMEKIFAKDKERARILLT--STNPEDIPINGRSLLRRLMKYGILGGIDLCDKQEVVNGLNKVLDLTINHYLERRLQFRVFAAGLAKSVHHARLLIGGRCISIKDQIVDVPGFMVRADKEPLIEYNPYSRYG 170 HSP 2 Score: 28.4906 bits (62), Expect = 2.453e-24 Identity = 14/26 (53.85%), Postives = 16/26 (61.54%), Query Frame = 2 Query: 62 KTFKKPRRPYEKERLDAELRLVGDMG 139 K PR P+EKERL E +LVG G Sbjct: 8 KRASTPRDPFEKERLIREAQLVGVYG 33 The following BLAST results are available for this feature:
BLAST of DY260160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260160 ID=DY260160; Name=DY260160; organism=Citrus clementina; type=EST; length=961bpback to top |