DY260176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_ASPFL (Superoxide dismutase [Cu-Zn] OS=Aspergillus flavus GN=sodC PE=3 SV=3) HSP 1 Score: 135.576 bits (340), Expect = 3.782e-31 Identity = 73/151 (48.34%), Postives = 89/151 (58.94%), Query Frame = 2 Query: 65 MVKAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 MVKAVAV G ++ + GTV+F Q + + PTTVS +++G FHVH GD TNGC S GPHFNP GKEHG PEDENRH A + D I G S++GR +V+ DDLG+ H SK TGNAG R AC +IG Sbjct: 1 MVKAVAVRGDSK-ISGTVTFEQADANAPTTVSWNITGHDANAERAFHVHQFGDNTNGCTSAGPHFNPFGKEHGAPEDENRHVGDLGNFKTDAEGNAVGSKQDKLIKLIGAESVLGRTLVIHAGTDDLGRSEHPESKKTGNAGARPACGVIG 150
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_COLGL (Superoxide dismutase [Cu-Zn] OS=Colletotrichum gloeosporioides GN=SOD1 PE=3 SV=3) HSP 1 Score: 134.806 bits (338), Expect = 6.452e-31 Identity = 70/151 (46.36%), Postives = 85/151 (56.29%), Query Frame = 2 Query: 65 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 MVKAV V+ G V G++ F QE + PT ++ +SG G H+H GD TNGC S GPHFNP K HG PED NRH + TV D+ + GP S+IGR +VV DDLGKG +E S TGNAG R AC +IG Sbjct: 1 MVKAVCVVRGDSKVTGSIVFEQESESAPTKITWDISGNDANAKRGMHIHTFGDNTNGCTSAGPHFNPHNKTHGAPEDSNRHVGDLGNIETDANGNSKGTVTDSHVKLIGPESVIGRTIVVHGGTDDLGKGDNEESLKTGNAGPRPACGVIG 151
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_PAESI (Superoxide dismutase [Cu-Zn] OS=Paecilomyces sinensis GN=SOD1 PE=3 SV=3) HSP 1 Score: 134.035 bits (336), Expect = 1.100e-30 Identity = 72/151 (47.68%), Postives = 86/151 (56.95%), Query Frame = 2 Query: 65 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKP-GPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 MVKAV VL G + G V+F QE D PTT+S +S GFH+ GD TNGC S GPHFNP GK HG DENRH + ++ D I GP+S+IGR VV+ DDLGKGG++ S TGNAG R AC +IG Sbjct: 1 MVKAVCVLRGDSKITGIVNFEQESDSSPTTISWEISNHDADAKRGFHITPFGDNTNGCTSAGPHFNPHGKTHGNVTDENRHVGDMGNIETDCDGNSKGSIKDKLIKLIGPHSVIGRTVVIHAGTDDLGKGGNDESLKTGNAGPRPACGVIG 151
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_KLULA (Superoxide dismutase [Cu-Zn] OS=Kluyveromyces lactis GN=SOD1 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.877e-30 Identity = 73/151 (48.34%), Postives = 82/151 (54.30%), Query Frame = 2 Query: 65 MVKAVAVLGGTEGVKGTVSFSQEG-DGPTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 MV AVAVL G V G V F QE D T +S ++G GFH+H GD TNGC S GPHFNP K HG PEDE RH + ++ D I GP SI+GR VVV DDLGKGG S TGNAG R AC +IG Sbjct: 1 MVNAVAVLKGDSSVSGIVRFEQESEDQQTKISWEITGNDANALRGFHIHTFGDNTNGCTSAGPHFNPFNKNHGAPEDEERHVGDLGNIPTDAQGISKGSLTDKHIKLLGPLSIVGRTVVVHAGQDDLGKGGDAESLKTGNAGARHACGVIG 151
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_CAEEL (Superoxide dismutase [Cu-Zn] OS=Caenorhabditis elegans GN=sod-1 PE=1 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 3.202e-30 Identity = 70/150 (46.67%), Postives = 89/150 (59.33%), Query Frame = 2 Query: 71 KAVAVLGGTEGVKGTVSFSQEGDGPTTV-SGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKG---GHELSKTTGNAGGRVACRII 508 +AVAVL G E V GT+ +Q+ + V G + GL PG HGFHVH GD+TNGC+S GPHFNP GK HG P+ E RH A + D + +GPN+++GR++VV DDLG+G E SK TGNAG R AC +I Sbjct: 26 RAVAVLRG-ETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAACGVI 174
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODE_ONCVO (Extracellular superoxide dismutase [Cu-Zn] OS=Onchocerca volvulus GN=sod-4 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.462e-30 Identity = 76/164 (46.34%), Postives = 91/164 (55.49%), Query Frame = 2 Query: 50 RSHSTMV------KAVAVLGGTEGVKGTVSFSQEGDGP-TTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGG---HELSKTTGNAGGRVACRIIG 511 RSHS + +AVAVL G GV G + F Q G TT+SGS+SGL PG HGFHVH GD TNGC S G H+NP GK HG P D +H A + I GP S+IG ++VV + DDLG+G E S TGNAG R+AC +IG Sbjct: 33 RSHSNGMHGNGARRAVAVLRGDAGVSGIIYFQQGSGGSITTISGSVSGLTPGLHGFHVHQYGDQTNGCTSAGDHYNPFGKTHGGPNDRIKHIGDLGNIVAGANGVAEVYINSYDIKLRGPLSVIGHSLVVHANTDDLGQGTGNMREESLKTGNAGSRLACGVIG 196
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_CAEBR (Superoxide dismutase [Cu-Zn] OS=Caenorhabditis briggsae GN=sod-1 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.217e-29 Identity = 69/150 (46.00%), Postives = 86/150 (57.33%), Query Frame = 2 Query: 71 KAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKG---GHELSKTTGNAGGRVACRII 508 +AVAVL G + V GT+ +Q + P + G + GL PG HGFHVH GD+TNGC+S GPHFNP GK HG P E RH A + D I +G N++IGR++VV DDLG+G E S TGNAG R AC +I Sbjct: 26 RAVAVLRG-DVVSGTIWITQNSESDPAVIEGEIKGLTPGLHGFHVHQYGDSTNGCLSAGPHFNPFGKTHGGPNSETRHVGDLGNVEAGADGVAKVHITDKLITLYGANTVIGRSMVVHAGQDDLGQGVGDKAEESAKTGNAGARAACGVI 174
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC6_DICDI (Probable superoxide dismutase [Cu-Zn] 6 OS=Dictyostelium discoideum GN=sodF PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.217e-29 Identity = 66/149 (44.30%), Postives = 90/149 (60.40%), Query Frame = 2 Query: 65 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRII 508 MV A+ ++ G GV+G V+ SQE +G P ++G++SGL PG HG HVH GDT+NGC+S G H+NP +EHG P D RH AT ++ D + FG S++GR +V+ D DD G+G SKT G++G RV C II Sbjct: 1 MVNAIVIIKGL-GVEGKVTLSQECEGSPIYINGTVSGLTPGQHGMHVHEFGDTSNGCISAGDHYNPLHREHGSPLDVERHIGDLGNIKALSNGVATISIRDTIMSLFGDISVMGRTMVIHSDRDDYGRGNFPDSKTAGHSGKRVGCGII 148
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_NPVAC (Putative superoxide dismutase [Cu-Zn] OS=Autographa californica nuclear polyhedrosis virus GN=SOD PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.075e-29 Identity = 68/149 (45.64%), Postives = 90/149 (60.40%), Query Frame = 2 Query: 68 VKAVAVLGGTEGVKGTVSFSQEG-DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTAT-FTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRII 508 +KA+ ++ G V G + F QE + P +SG L L G HGFHVH GDT+NGC S G HFNP ++HG P+ E RH + T ++DN + +GP++IIGR++VV D DDLG H LSKTTGN+GGR+ C II Sbjct: 1 MKAICIISGD--VHGKIYFQQESANQPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGEHFNPTNEDHGAPDAEIRHVGDLGNIKSAGYNSLTEVNMMDNVMSLYGPHNIIGRSLVVHTDKDDLGLTDHPLSKTTGNSGGRLGCGII 147
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: CCS_HUMAN (Copper chaperone for superoxide dismutase OS=Homo sapiens GN=CCS PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.711e-29 Identity = 65/145 (44.83%), Postives = 84/145 (57.93%), Query Frame = 2 Query: 74 AVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRII 508 AVA+LGG V+G V F Q + G++ GL+PG HG HVH GD TN C S G HFNP G HG P+D +RH A F + D Q+ + +IGR++++ DDLG+GGH LSK TGN+G R+AC II Sbjct: 89 AVAILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKVW---DVIGRSLIIDEGEDDLGRGGHPLSKITGNSGERLACGII 230 The following BLAST results are available for this feature:
BLAST of DY260176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260176 ID=DY260176; Name=DY260176; organism=Citrus clementina; type=EST; length=895bpback to top |