DY260176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_LAMCR (Superoxide dismutase [Cu-Zn] (Fragment) OS=Lampanyctus crocodilus GN=sod1 PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 4.478e-24 Identity = 66/146 (45.21%), Postives = 78/146 (53.42%), Query Frame = 2 Query: 65 MVKAVAVLGGTEG-VKGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVA 496 MVKAV VL GT G V GTV F QE D P ++G + GL PG HGFHVHA GD TN H P D++RH A + D + GP SIIGR +V+ DDLGKGG++ S TGNAGGR+A Sbjct: 1 MVKAVCVLKGTTGEVTGTVYFEQESDSAPVKLTGQIIGLAPGLHGFHVHAFGDNTNXXXXXXXXXXXXXXTHAGPTDKDRHVGDLGN-------VAKIDITDKMLTLNGPLSIIGRTMVIHEKADDLGKGGNDESLKTGNAGGRMA 139
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_DROPE (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila persimilis GN=Sod PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.849e-24 Identity = 56/108 (51.85%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 107 KGTVSFSQE-GDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRD 427 KGTV F QE + P V+G GL G HGFHVH GD TNGCMS+GPHFNP KEHG P DENRH ++ D++I FG +SIIGR VVV D Sbjct: 6 KGTVFFEQETSEAPVKVTGEGLGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPRNKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSKITLFGADSIIGRTVVVHAD 113
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_DROPB (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila pseudoobscura bogotana GN=Sod PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.849e-24 Identity = 56/108 (51.85%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 107 KGTVSFSQE-GDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRD 427 KGTV F QE + P V+G GL G HGFHVH GD TNGCMS+GPHFNP KEHG P DENRH ++ D++I FG +SIIGR VVV D Sbjct: 6 KGTVFFEQETSEAPVKVTGEGLGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPRNKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSKITLFGADSIIGRTVVVHAD 113
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_DROMI (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila miranda GN=Sod PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.849e-24 Identity = 56/108 (51.85%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 107 KGTVSFSQE-GDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRD 427 KGTV F QE + P V+G GL G HGFHVH GD TNGCMS+GPHFNP KEHG P DENRH ++ D++I FG +SIIGR VVV D Sbjct: 6 KGTVFFEQETSEAPVKVTGEGLGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPRNKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSKITLFGADSIIGRTVVVHAD 113
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_DROTO (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila tolteca GN=Sod PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.639e-24 Identity = 55/108 (50.93%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 107 KGTVSFSQE-GDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRD 427 KGTV F QE + P V+G + GL G HGFHVH G+ TNGCMS+GPHFNP KEHG P D NRH ++ D++I FG NSIIGR VVV D Sbjct: 6 KGTVFFEQETSEAPVKVTGEVLGLTKGLHGFHVHEFGNNTNGCMSSGPHFNPGNKEHGAPTDGNRHLGDLGNIQAAGDSPTAVSITDSKITLFGANSIIGRTVVVHAD 113
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_DROMD (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila madeirensis GN=Sod PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.702e-23 Identity = 54/108 (50.00%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 107 KGTVSFSQE-GDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRD 427 KG V F QE + P V+G + GL G HGFHVH GD TNGCMS+GPH+NP KEHG P DENRH ++ D++I FG +SIIGR VVV D Sbjct: 6 KGIVFFEQETSEAPVKVTGEVLGLAKGLHGFHVHEFGDNTNGCMSSGPHYNPRNKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSKITLFGADSIIGRTVVVHAD 113
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODE_SCHMA (Extracellular superoxide dismutase [Cu-Zn] OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.262e-18 Identity = 58/137 (42.34%), Postives = 73/137 (53.28%), Query Frame = 2 Query: 110 GTVSFSQEGDGPTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFT--VVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 G V F+Q GD V+GS++GL PG G HVH G N C+ GPHFNP + HGP RHA A F V + PF + IGRA+V+ + DDLG+ E S+TTGN+G R+AC IG Sbjct: 47 GAVWFTQHGDY-MYVNGSVAGLPPGKLLGTHVHRYGGLGNMCLEAGPHFNPFNQRHGPRHGYPRHAGDLGNIRVGRGGVAKFDFYVTIKGLGPF--DGFIGRALVIHANRDDLGRNRDEGSRTTGNSGPRLACATIG 180
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODE_RAT (Extracellular superoxide dismutase [Cu-Zn] OS=Rattus norvegicus GN=Sod3 PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 3.437e-16 Identity = 53/142 (37.32%), Postives = 66/142 (46.48%), Query Frame = 2 Query: 104 VKGTVSFSQEG-----DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGP-PEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 + G V F Q G + + G + H HVH GD + GC STGPH+NP G H P D AT GP+SI+GRAVVV DDLGKGG++ S GNAG R+AC ++G Sbjct: 85 ITGLVLFRQLGPSSRLEASFNLEGFPAEQNTSNHAIHVHEFGDLSQGCESTGPHYNPLGVPHPQHPGDFGNFVVRDGRLWKHRMGLATSLA--------GPHSILGRAVVVHAGEDDLGKGGNQASVQNGNAGRRLACCVVG 218
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODE_RABIT (Extracellular superoxide dismutase [Cu-Zn] OS=Oryctolagus cuniculus GN=SOD3 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.463e-14 Identity = 53/148 (35.81%), Postives = 65/148 (43.92%), Query Frame = 2 Query: 104 VKGTVSFSQEGDGPTT-----VSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGP-PEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIGPPG*SP 529 V G V F Q G G + G HVH GD + GC STG H+NP +H P D A A GP+SI+GRAVVV DDLG+GG+ S GNAG R+AC ++G G +P Sbjct: 82 VSGLVVFRQLGPGAQLEAFFDLEGFPVEANLSSRAIHVHQFGDLSQGCDSTGAHYNPLAVQHPQHPGDFGNFAVRDGRLWKYRSGLAASLA--------GPHSIVGRAVVVHAGEDDLGRGGNAASVENGNAGPRLACCVVGASGPAP 221
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODE_HUMAN (Extracellular superoxide dismutase [Cu-Zn] OS=Homo sapiens GN=SOD3 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 3.217e-14 Identity = 45/109 (41.28%), Postives = 55/109 (50.46%), Query Frame = 2 Query: 197 HVHALGDTTNGCMSTGPHFNPAGKEHGP-PEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIGPPG 520 HVH GD + GC STGPH+NP H P D A A GP+SI+GRAVVV DDLG+GG++ S GNAG R+AC ++G G Sbjct: 114 HVHQFGDLSQGCESTGPHYNPLAVPHPQHPGDFGNFAVRDGSLWRYRAGLAASLA--------GPHSIVGRAVVVHAGEDDLGRGGNQASVENGNAGRRLACCVVGVCG 214 The following BLAST results are available for this feature:
BLAST of DY260176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260176 ID=DY260176; Name=DY260176; organism=Citrus clementina; type=EST; length=895bpback to top |