DY260176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC5_DICDI (Superoxide dismutase [Cu-Zn] 5 OS=Dictyostelium discoideum GN=sodE PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 7.364e-35 Identity = 74/148 (50.00%), Postives = 91/148 (61.49%), Query Frame = 2 Query: 68 VKAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRII 508 + A+ V+ G +GV G ++F Q + P +SG +SGLK G HGFHVH GDTTNGC+S G HFNP KEHG P DENRH + + DN I FG NSIIGR++VV DDLG+G + SK TGNAG R+ C II Sbjct: 1 MSAICVIKG-DGVDGIINFKQNDNKSPVIISGVISGLKEGKHGFHVHEFGDTTNGCLSAGAHFNPFKKEHGSPNDENRHVGDLGNIESNKDKKSIINITDNIITLFGQNSIIGRSIVVHDKEDDLGRGNSQDSKITGNAGSRLGCGII 147
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC1_DICDI (Superoxide dismutase [Cu-Zn] 1 OS=Dictyostelium discoideum GN=sodA PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 7.364e-35 Identity = 76/147 (51.70%), Postives = 91/147 (61.90%), Query Frame = 2 Query: 74 AVAVLGGTEGVKGTVSFSQEG-DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 AV V+ G E V G V F+QE D P TV+ ++GL+ G HGFHVHA GDTTNGC+S GPHFNP GK HG P DE+RH T+ D I FG ++I+GR +VV D DDLGKGG S TTG AG R+ C +IG Sbjct: 5 AVCVIKG-EKVNGVVKFTQENKDSPVTVNYDITGLEKGEHGFHVHAFGDTTNGCVSAGPHFNPFGKNHGAPSDEDRHVGDLGNIVADGESNTKGTISDKIISLFGEHTIVGRTMVVHADQDDLGKGGKPDSLTTGAAGARLGCGVIG 150
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODE_BRUPA (Extracellular superoxide dismutase [Cu-Zn] OS=Brugia pahangi PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 9.618e-35 Identity = 78/159 (49.06%), Postives = 95/159 (59.75%), Query Frame = 2 Query: 44 VLRSHSTMVKAVAVLGGTEG-VKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKG---GHELSKTTGNAGGRVACRII 508 + R+ + A+AVL G + GT+ F Q+ + TT+SG + GL PG HGFHVH GDTTNGC+S GPHFNP K HG P DE RH TA + D + GPNSIIGR++VV D DDLGKG + S TGNAGGRVAC I+ Sbjct: 38 IRRTITKTATAIAVLHSDNGNINGTIHFQQDKNS-TTISGEIKGLTPGLHGFHVHQYGDTTNGCISAGPHFNPYNKTHGDPTDEMRHVGDLGNIVAGADGTAHIDISDKHVQLLGPNSIIGRSLVVHADQDDLGKGVGDKKDESLKTGNAGGRVACGIV 195
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_PIG (Superoxide dismutase [Cu-Zn] OS=Sus scrofa GN=SOD1 PE=1 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 9.618e-35 Identity = 72/147 (48.98%), Postives = 90/147 (61.22%), Query Frame = 2 Query: 71 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 KAV VL G V+GT+ F +G+ V+G++ GL G HGFHVH GD T GC S GPHFNP K+HG P+D+ RH AT + D+ I G +SIIGR +VV PDDLG+GG+E S TGNAG R+AC +IG Sbjct: 4 KAVCVLKGDGPVQGTIYFELKGEKTVLVTGTIKGLAEGDHGFHVHQFGDNTQGCTSAGPHFNPESKKHGGPKDQERHVGDLGNVTAGKDGVATVYIEDSVIALSGDHSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSRLACGVIG 150
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_ASPJA (Superoxide dismutase [Cu-Zn] (Fragment) OS=Aspergillus japonicus GN=sodC PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 9.618e-35 Identity = 70/98 (71.43%), Postives = 74/98 (75.51%), Query Frame = 2 Query: 188 HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNA 481 HGFHVHALGDTTNGCMSTGPHFNP GKEHG P+DENRHA A V D+QIP G +SIIGRAVVV DPDDLGKGGHELSKTTGN+ Sbjct: 8 HGFHVHALGDTTNGCMSTGPHFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADPDDLGKGGHELSKTTGNS 105
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_BOVIN (Superoxide dismutase [Cu-Zn] OS=Bos taurus GN=SOD1 PE=1 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 1.256e-34 Identity = 75/147 (51.02%), Postives = 89/147 (60.54%), Query Frame = 2 Query: 71 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 KAV VL G V+GT+ F +GD V+GS++GL G HGFHVH GD T GC S GPHFNP K+HG P+DE RH A +VD I G SIIGR +VV PDDLG+GG+E S TGNAG R+AC +IG Sbjct: 4 KAVCVLKGDGPVQGTIHFEAKGD-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSRLACGVIG 149
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_CANFA (Superoxide dismutase [Cu-Zn] OS=Canis familiaris GN=SOD1 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.641e-34 Identity = 73/148 (49.32%), Postives = 90/148 (60.81%), Query Frame = 2 Query: 68 VKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 +KAV VL G V+GT+ F Q+G GP VSG+++GL G HGFHVH D T GC S GPHFNP K+HG P+D+ RH A ++ D+ I G SIIGR +VV DDLGKG +E S TGNAG R+AC +IG Sbjct: 3 MKAVCVLKGQGPVEGTIHFVQKGSGPVVVSGTITGLTEGEHGFHVHQFEDXTQGCTSAGPHFNPLSKKHGGPKDQERHVGDLGNVTAGKDGVAIVSIEDSLIALSGDYSIIGRTMVVHEKRDDLGKGDNEESTQTGNAGSRLACGVIG 150
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_MOUSE (Superoxide dismutase [Cu-Zn] OS=Mus musculus GN=Sod1 PE=1 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 2.143e-34 Identity = 74/149 (49.66%), Postives = 89/149 (59.73%), Query Frame = 2 Query: 68 VKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 +KAV VL G V+GT+ F Q+ G P +SG ++GL G HGFHVH GD T GC S GPHFNP K+HG P DE RH A ++ D I G +SIIGR +VV DDLGKGG+E S TGNAG R+AC +IG Sbjct: 3 MKAVCVLKGDGPVQGTIHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSAGPHFNPHSKKHGGPADEERHVGDLGNVTAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDLGKGGNEESTKTGNAGSRLACGVIG 151
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_CRYGA (Superoxide dismutase [Cu-Zn] OS=Cryptococcus gattii GN=SOD1 PE=2 SV=3) HSP 1 Score: 146.362 bits (368), Expect = 2.143e-34 Identity = 76/151 (50.33%), Postives = 87/151 (57.62%), Query Frame = 2 Query: 65 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 MVKAVAVL G V G ++F+QE +G P TVSG + L GFHVH GD TNGC S GPHFNP GK HG P D RH A+ + D + FGP SIIGR +VV DD GKGG+ S TGNAG R AC +IG Sbjct: 1 MVKAVAVLKGDSPVTGVITFTQEKEGAPVTVSGDIKNLDANAERGFHVHEFGDNTNGCTSAGPHFNPHGKNHGAPSDSERHVGDLGNVKTDGNGVASVNISDKSLSLFGPYSIIGRTIVVHAGTDDFGKGGNAESLKTGNAGARAACGVIG 151
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_CHICK (Superoxide dismutase [Cu-Zn] OS=Gallus gallus GN=SOD1 PE=1 SV=3) HSP 1 Score: 146.362 bits (368), Expect = 2.143e-34 Identity = 72/148 (48.65%), Postives = 90/148 (60.81%), Query Frame = 2 Query: 68 VKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 +KAV V+ G V+G + F Q+G GP V+G ++GL G HGFHVH GD TNGC S G HFNP GK+HG P+D +RH A + D+ I GP+ IIGR +VV DDLG+GG SK TGNAG R+AC +IG Sbjct: 4 LKAVCVMKGDAPVEGVIHFQQQGSGPVKVTGKITGLSDGDHGFHVHEFGDNTNGCTSAGAHFNPEGKQHGGPKDADRHV-GDLGNVTAKGGVAEVEIEDSVISLTGPHCIIGRTMVVHAKSDDLGRGGDNESKLTGNAGPRLACGVIG 150 The following BLAST results are available for this feature:
BLAST of DY260176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260176 ID=DY260176; Name=DY260176; organism=Citrus clementina; type=EST; length=895bpback to top |