DY260187
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260187 vs. ExPASy Swiss-Prot
Match: RK2_CALFG (50S ribosomal protein L2, chloroplastic OS=Calycanthus floridus var. glaucus GN=rpl2 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.418e-19 Identity = 63/195 (32.31%), Postives = 95/195 (48.72%), Query Frame = 1 Query: 58 HRKGPAQ--FPSLHFGERNGYLKGVVPEIIHDPGRGAPLARVTFRHPFPYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLPKAGNAYHKFRVKPNCWPKVRGVAMNPVEHPHGGG 636 HR G + + + F + G + I +DP R A + + + +K + G G + G + + +GN LP+ +P G + N+E +G G LARA+G A +I+ + T R LPSG ++I C A +GQV G +K L +AG+ + P VRGV MNPV+HPHGGG Sbjct: 51 HRGGGHKRLYRKIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPISMGNALPLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLR--LPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGK-----RPVVRGVVMNPVDHPHGGG 233
BLAST of DY260187 vs. ExPASy Swiss-Prot
Match: RK2A_CHLSC (50S ribosomal protein L2-A, chloroplastic OS=Chloranthus spicatus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.418e-19 Identity = 65/201 (32.34%), Postives = 97/201 (48.26%), Query Frame = 1 Query: 58 HRKGPAQ--FPSLHFGERNGYLKGVVPEIIHDPGRGAPLARVTFRHPFPYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRS--IPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLPKAGNAYHKFRVKPNCW----PKVRGVAMNPVEHPHGGG 636 HR G + + + F + G + I +DP R A + + + +K + G G + G + + +GN LP+ + +P G + N+E +G G LARA+G A +I+ + T R LPSG ++I C A +GQV G +K L +AG+ CW P VRGV MNPV+HPHGGG Sbjct: 51 HRGGGHKRLYRKIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPISMGNALPLSATDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLR--LPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGGG 235
BLAST of DY260187 vs. ExPASy Swiss-Prot
Match: RK2A_ATRBE (50S ribosomal protein L2-A, chloroplastic OS=Atropa belladonna GN=rpl2-A PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.418e-19 Identity = 62/195 (31.79%), Postives = 96/195 (49.23%), Query Frame = 1 Query: 58 HRKGPAQ--FPSLHFGERNGYLKGVVPEIIHDPGRGAPLARVTFRHPFPYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLPKAGNAYHKFRVKPNCWPKVRGVAMNPVEHPHGGG 636 HR G + + + F + G + I +DP R A + + + +K + G G + G + + +GN LP+ +P G + N+E +G G LARA+G A +I+ + + +KLPSG ++I C A +GQV G +K L +AG+ + P VRGV MNPV+HPHGGG Sbjct: 51 HRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGK-----RPVVRGVVMNPVDHPHGGG 233
BLAST of DY260187 vs. ExPASy Swiss-Prot
Match: RL2_VIBFM (50S ribosomal protein L2 OS=Vibrio fischeri (strain MJ11) GN=rplB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.852e-19 Identity = 66/180 (36.67%), Postives = 91/180 (50.56%), Query Frame = 1 Query: 115 LKGVVPEIIHDPGRGAPLARVTFRHPFPYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLPKAGNAYHKFRVKPNCWPKVRGVAMNPVEHPHGGGNHQHIG 654 + VV + +DP R A +A V F ++ IA +G+ G V G A + GN LP+R+IP G+ V VE G +AR++G YA II+ D ++L SG + + S RA IG+V + L KAG + P VRGVAMNPV+HPHGGG + G Sbjct: 74 IPAVVERLEYDPNRSANIALVLFADG-----ERRYIIAPKGIQAGDTVQSGVDAPIKAGNCLPLRNIPVGSTVHCVELKPGKGAQIARSAGAYAQIIAR--DGAYVTLRLRSGEMRKVLSEGRATIGEVGNSEHMLRELGKAGATRWR-----GVRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of DY260187 vs. ExPASy Swiss-Prot
Match: RL2_VIBF1 (50S ribosomal protein L2 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=rplB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.852e-19 Identity = 66/180 (36.67%), Postives = 91/180 (50.56%), Query Frame = 1 Query: 115 LKGVVPEIIHDPGRGAPLARVTFRHPFPYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLPKAGNAYHKFRVKPNCWPKVRGVAMNPVEHPHGGGNHQHIG 654 + VV + +DP R A +A V F ++ IA +G+ G V G A + GN LP+R+IP G+ V VE G +AR++G YA II+ D ++L SG + + S RA IG+V + L KAG + P VRGVAMNPV+HPHGGG + G Sbjct: 74 IPAVVERLEYDPNRSANIALVLFADG-----ERRYIIAPKGIQAGDTVQSGVDAPIKAGNCLPLRNIPVGSTVHCVELKPGKGAQIARSAGAYAQIIAR--DGAYVTLRLRSGEMRKVLSEGRATIGEVGNSEHMLRELGKAGATRWR-----GVRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of DY260187 vs. ExPASy Swiss-Prot
Match: RL2_SILST (50S ribosomal protein L2 OS=Silicibacter sp. (strain TM1040) GN=rplB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.852e-19 Identity = 66/209 (31.58%), Postives = 99/209 (47.37%), Query Frame = 1 Query: 100 ERNGY-LKGVVPEIIHDPGRGAPLARVTFRHPFPYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLPKAGNAYHKFRVKPNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGPN*ARRT 723 +RN + + V I +DP R A +A V + ++ +A + + G V KA + GN +P +P G +V N+E G G +ARA+G YA + D +++L SG +++ C A +G V+ + + KAG HK + P VRGV MNP++HPHGGG G S R P K P +RT Sbjct: 68 KRNKFDVAATVERIEYDPNRTAFIALVKYEDG-----EQAYILAPQRLAVGDKVIASAKADIKPGNAMPFSGMPIGTIVHNIEMKPGKGGQIARAAGTYAQFVGR--DGGYAQIRLSSGELRLVRQECMATVGAVSNPDNSNQNYGKAGRMRHKGK-----RPSVRGVVMNPIDHPHGGGE----GRTSGGRHPVTPWGK--PTKGKRT 258
BLAST of DY260187 vs. ExPASy Swiss-Prot
Match: RL2_SHEFN (50S ribosomal protein L2 OS=Shewanella frigidimarina (strain NCIMB 400) GN=rplB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.852e-19 Identity = 61/176 (34.66%), Postives = 89/176 (50.57%), Query Frame = 1 Query: 127 VPEIIHDPGRGAPLARVTFRHPFPYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLPKAGNAYHKFRVKPNCWPKVRGVAMNPVEHPHGGGNHQHIG 654 V + +DP R A +A V + ++ +AA+GM G + G A + GN P+R+IP G+VV VE G +AR++G Y +++ D ++L SG + +P CRA G+V + L KAG + P VRGVAMNPV+HPHGGG + G Sbjct: 78 VERLEYDPNRTAHIALVLYADG-----ERRYILAAKGMKAGDPIQSGLDAEIKTGNARPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAGAKRWR-----GVRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of DY260187 vs. ExPASy Swiss-Prot
Match: RL2_RICM5 (50S ribosomal protein L2 OS=Rickettsia massiliae (strain Mtu5) GN=rplB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.852e-19 Identity = 60/181 (33.15%), Postives = 95/181 (52.49%), Query Frame = 1 Query: 115 LKGVVPEIIHDPGRGAPLARVTFRHPFPYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLPKAG-NAYHKFRVKPNCWPKVRGVAMNPVEHPHGGGNHQHIG 654 + +V I +DP R A +A + + + +A + + G V + A + +GN LP++ IP G + NVE VG G +AR++G ++ D+ ++KL SG +++P C+A IG ++ + L KAG N + +R P VRGVAMNPV+HPHGGG + G Sbjct: 74 ISAIVERIEYDPNRTAFIALIKYEDG-----EYSYILAPQKLSVGNRVISSQDADIKIGNCLPLKCIPIGTTLHNVEMQVGKGGQIARSAGTSVDLV--GKDSGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAGRNRWLGWR------PHVRGVAMNPVDHPHGGGEGKTSG 241
BLAST of DY260187 vs. ExPASy Swiss-Prot
Match: RL2_RICFE (50S ribosomal protein L2 OS=Rickettsia felis GN=rplB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.852e-19 Identity = 60/181 (33.15%), Postives = 95/181 (52.49%), Query Frame = 1 Query: 115 LKGVVPEIIHDPGRGAPLARVTFRHPFPYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLPKAG-NAYHKFRVKPNCWPKVRGVAMNPVEHPHGGGNHQHIG 654 + +V I +DP R A +A + + + +A + + G V + A + +GN LP++ IP G + NVE VG G +AR++G ++ D+ ++KL SG +++P C+A IG ++ + L KAG N + +R P VRGVAMNPV+HPHGGG + G Sbjct: 74 ISAIVERIEYDPNRTAFIALIKYEDG-----EYSYILAPQKLSVGDRVISSQDADIKIGNCLPLKFIPTGTTLHNVEMKVGKGGQIARSAGTSVDLV--GKDSGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAGRNRWLGWR------PHVRGVAMNPVDHPHGGGEGKTSG 241
BLAST of DY260187 vs. ExPASy Swiss-Prot
Match: RL2_POLSQ (50S ribosomal protein L2 OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=rplB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.852e-19 Identity = 70/211 (33.18%), Postives = 107/211 (50.71%), Query Frame = 1 Query: 7 IPPQRKGAGSVFKSHTHHRKGPAQFPSLHFGERNGYLKGVVPEIIHDPGRGAPLARVTFRHPFPYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLPKAG-NAYHKFRVKPNCWPKVRGVAMNPVEHPHGGG 636 I + KG G H HH + +++G + V + +DP R A +A + F ++ AA+GM GQ + G +A + GN LP+R+IP G+ + VE G +AR++G AV+++ + +V+L SG + + CRA IG+V + + + KAG N + R P VRGVAMNPV+HPHGGG Sbjct: 49 ITTRHKGGG-----HKHHYR----VVDFKRNDKDG-IPAKVERLEYDPNRSANIALIVFADG-----ERRYIPAAKGMTVGQSLMSGSEAPIKSGNNLPIRNIPVGSTIHCVEIMPGKGAQVARSAGGSAVLLAR--EGVYAQVRLRSGEVRRVLIECRATIGEVGNEEHSLRVIGKAGANRWRGIR------PTVRGVAMNPVDHPHGGG 236 The following BLAST results are available for this feature:
BLAST of DY260187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260187 ID=DY260187; Name=DY260187; organism=Citrus clementina; type=EST; length=1040bpback to top |