DY260187
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260187 vs. ExPASy Swiss-Prot
Match: RL2_PYRIL (50S ribosomal protein L2P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl2p PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 2.321e-46 Identity = 103/242 (42.56%), Postives = 141/242 (58.26%), Query Frame = 1 Query: 1 RVIPPQRKGAGSVFKSHTHHRKGPAQFPSLHFGERNGYLKGVVPEIIHDPGRGAPLARVTFRHPFPYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLPKAGNAYHKFRVKPNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGPN*ARRTG 726 R++ +R GS F+S + R GP ++P L+ GY V EI+H+PG AP+AR+ + ++ AAEG+Y GQ + G A GN++ + +PEG +V NVE GD G ARA G YAV++ P+ + T ++LPSG + S RA +G VAGGGR EKP KAG YH+ + K +P VRG AM+P HPHGGG+H G + V + APPGQKVG +R TG Sbjct: 4 RILVQRRGRGGSQFRSPSWKRDGPVRYPPLNVTVGRGY----VVEILHEPGLNAPVARIRLENGVEFLN-----FAAEGLYVGQEIEVGDLAAPKTGNIVILGRVPEGTMVFNVEKRAGDGGKFARAGGTYAVVVGQKPEENKTIIRLPSGKVVEVDSRGRATVGIVAGGGRIEKPFLKAGKKYHRAKAKAWKYPTVRGKAMSPYAHPHGGGSHPKGG--TPVPKTAPPGQKVGFYGSRCTG 234
BLAST of DY260187 vs. ExPASy Swiss-Prot
Match: RL2_SULTO (50S ribosomal protein L2P OS=Sulfolobus tokodaii GN=rpl2p PE=3 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 6.753e-46 Identity = 104/238 (43.70%), Postives = 139/238 (58.40%), Query Frame = 1 Query: 16 QRKGAGSV-FKSHTHHRKGPAQFPSLHFGERNGYLKGVVPEIIHDPGRGAPLARVTFRHPFPYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLPKAGNAYHKFRVKPNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGPN*ARRTG 726 QR G G + F+S + R G A+ P++ G G V +I+H+PG APLA + + + +G+ GQ + GK A + GN++ V ++PEG ++ N+E GD G AR++G Y V++ D VKL S + S RA++G VAGGG TEKPL KAGN Y K++VK WP VRGVAMN V HPHGGG HQ + STV R+APPG+KVG ARRTG Sbjct: 8 QRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLALIKLDDGTKFYVP-----SVQGLVVGQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEKTRGDGGKFARSAGTYGVVVGKT--GDKVLVKLSSEKIAQVSSNARAIVGVVAGGGVTEKPLLKAGNNYWKYKVKAKKWPHVRGVAMNAVSHPHGGGLHQSVSRPSTVSRNAPPGRKVGHIAARRTG 233
BLAST of DY260187 vs. ExPASy Swiss-Prot
Match: RL2_PYRAR (50S ribosomal protein L2P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rpl2p PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 8.819e-46 Identity = 103/242 (42.56%), Postives = 140/242 (57.85%), Query Frame = 1 Query: 1 RVIPPQRKGAGSVFKSHTHHRKGPAQFPSLHFGERNGYLKGVVPEIIHDPGRGAPLARVTFRHPFPYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLPKAGNAYHKFRVKPNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGPN*ARRTG 726 R++ +R GS F+S + R GP ++ L GY V E++H+PG AP+AR+ + AAEG+Y GQ + G AT GN++ + IPEG ++ NVE GD G AR+SG YAV++ P+ + T ++LPSG + + RA +G VAGGGR EKP KAG YH+ R K +P VRG AM+P HPHGGG+HQ G + V + APPGQKVG +R TG Sbjct: 4 RILVQRRGRGGSQFRSPSWKRDGPVRYLPLEATSGRGY----VVELLHEPGLNAPVARIVTESGAEFFNY-----AAEGLYVGQVIEMGSGATPKAGNIMILGEIPEGTMIFNVEKRAGDGGKYARSSGTYAVVVGQKPEENKTIIRLPSGRVIEVDARGRATVGIVAGGGRIEKPFLKAGKKYHRARAKAWKYPTVRGKAMSPYAHPHGGGSHQKGG--TPVPKTAPPGQKVGFIGSRCTG 234
BLAST of DY260187 vs. ExPASy Swiss-Prot
Match: RL2_THENV (50S ribosomal protein L2P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl2p PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.152e-45 Identity = 103/242 (42.56%), Postives = 143/242 (59.09%), Query Frame = 1 Query: 1 RVIPPQRKGAGSVFKSHTHHRKGPAQFPSLHFGERNGYLKGVVPEIIHDPGRGAPLARVTFRHPFPYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLPKAGNAYHKFRVKPNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGPN*ARRTG 726 R++ +R GS F+S + R+GP ++P L R G V +IIH PG AP+A++ + ++ AAEG+Y GQ + G+ A+ GNV+ + PEG +V NVE GD G AR+ G YAV++ P+ + T V+LPSG + + RA +G VAGGGR EKP+ KAG Y++ R K +P VRG AM+P HPHGGG+HQ G + V + APPGQKVG +R TG Sbjct: 4 RILVQRRGRGGSQFRSPSWRREGPVRYPPLGTAGR-----GYVVDIIHVPGLNAPVAKIRLENGLEFLNY-----AAEGLYVGQEIEIGEAASPKTGNVVVLGKAPEGTMVFNVEKRPGDGGKFARSGGTYAVVVGQKPEENKTIVRLPSGRTMEVDARGRATVGLVAGGGRIEKPMVKAGKKYYRARAKAWKYPLVRGKAMSPYAHPHGGGSHQKGG--TPVSKTAPPGQKVGFIGSRCTG 233
BLAST of DY260187 vs. ExPASy Swiss-Prot
Match: RL2_METBU (50S ribosomal protein L2P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl2p PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.504e-45 Identity = 100/238 (42.02%), Postives = 138/238 (57.98%), Query Frame = 1 Query: 16 QRKGAGS-VFKSHTHHRKGPAQFPSLHFGERNGYLKGVVPEIIHDPGRGAPLARVTFRHPFPYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLPKAGNAYHKFRVKPNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGPN*ARRTG 726 Q +G GS +++ +H K + P + + L G V I HDP R AP+A V F + +K+ + EG+ G+ + CG A + GN LP+ IPEG +CN+E D G AR+SG YA ++S + V++PSG K CRA IG VAGGGR ++P KAG YHK + + +P+V G+AMN V+HP GGGN +H G +TV R+APPG+KVG ARRTG Sbjct: 8 QNRGRGSPTYRAPSHKYKAELKHPRV---DEESTLNGTVIGIEHDPARSAPIAMVAFENG-----KKQFIVVPEGISVGEKLSCGVSAEVKPGNTLPLAEIPEGIPICNIESKPNDGGQYARSSGVYATLVSR--ELSKVVVRMPSGVLKWFHPKCRATIGIVAGGGRVDRPFLKAGKKYHKMKARAAKYPRVSGIAMNVVDHPFGGGNRKHPGKPTTVSRNAPPGRKVGHIAARRTG 235
BLAST of DY260187 vs. ExPASy Swiss-Prot
Match: RL2_METAC (50S ribosomal protein L2P OS=Methanosarcina acetivorans GN=rpl2p PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 2.566e-45 Identity = 99/239 (41.42%), Postives = 143/239 (59.83%), Query Frame = 1 Query: 16 QRKGAGS-VFKSHTHHRKGPAQFPSLHFGERNGYLKGVVPEIIHDPGRGAPLARVTFRHPFPYMKQKELFI-AAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLPKAGNAYHKFRVKPNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGPN*ARRTG 726 Q +G G+ +++ +H K + P + + N L+G V I HDP R AP+A+V F + +ELF+ A+EG+ G + CG A + GN++P+ ++PEG +CNVE D G R+SG YA +++H T V +PSG K + CRA++G VAG GR ++P KAG YHK + + +P+V VAMNP +HP GGG +H G +TV R+APPG+KVG ARRTG Sbjct: 8 QNRGRGTPTYRAPSHKYKADLRHPRV---DENSSLRGEVVGIEHDPARSAPIAKVAFENG------EELFLLASEGIAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVRSSGVYATVVTHEATR--TAVSMPSGNIKWLNPKCRAVVGIVAGSGRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKHPGKPTTVSRNAPPGRKVGLIAARRTG 235
BLAST of DY260187 vs. ExPASy Swiss-Prot
Match: RL2_THEPD (50S ribosomal protein L2P OS=Thermofilum pendens (strain Hrk 5) GN=rpl2p PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 4.377e-45 Identity = 105/243 (43.21%), Postives = 147/243 (60.49%), Query Frame = 1 Query: 1 RVIPPQRKGAGSVFKSHTHHRKGPAQFPSLHFGE-RNGYLKGVVPEIIHDPGRGAPLARVTFRHPFPYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLPKAGNAYHKFRVKPNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGPN*ARRTG 726 R++ +R GSVF++ R GPA++P + E +N L GVV +++H+PGRGAPLA V F K I EG+ GQ +Y G KA ++G+++ + ++PEG +V N+E GD G LAR+SG YA++++H+ N T ++LPS K + S RA IG VA GGR EKP+ KAG +H R K +P VRG AM+ HP GGG+H + R+APPG+KVG RRTG Sbjct: 4 RLLVQRRGRGGSVFRNPGWKRLGPARYPPYNPEEFKNKVLVGVVKDLLHEPGRGAPLALVEFEDG-----TKMYMIPPEGLAVGQKIYYGAKAPAVLGSIVEIGNVPEGTIVSNIEIRPGDGGKLARSSGAYALVLAHS--NGKTLIQLPSKKVKEVSSEARATIGMVAAGGRIEKPMLKAGKMWHWSRAKSFKYPTVRGKAMSAYAHPAGGGHHPK--GLTPAPRNAPPGRKVGHIAPRRTG 237
BLAST of DY260187 vs. ExPASy Swiss-Prot
Match: RL2_CALMQ (50S ribosomal protein L2P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl2p PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 4.377e-45 Identity = 103/239 (43.10%), Postives = 143/239 (59.83%), Query Frame = 1 Query: 16 QRKG-AGSVFKSHTHHRKGPAQFPSLHFGERNGYLKGVVPEIIHDPGRGAPLARVTFRHPFPYMKQKELFI-AAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLPKAGNAYHKFRVKPNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGPN*ARRTG 726 QR G GS F+S + R P ++ + ++G++ E++H G AP V + +E+++ A EG+Y G+ + G A + GNV+P+ IPEG +VCN+E VGD G AR+SG Y V++ H + TT V+LPSG + S RA IG VAGGGR EKP KAGN YH+ R K +PKVRG AM+ HPHGGG+HQ G + V+++APPGQKVG ++ TG Sbjct: 8 QRAGRGGSQFRSPSWRRIAPLRYVQFSEEQLKTTIRGIIKELVHVTGLNAPAMHVVLENG------EEMYLPAVEGVYVGKIIEFGPDAKVEPGNVMPIGKIPEGTMVCNIEKRVGDGGKYARSSGTYGVVMIHR--DSTTLVQLPSGRMIEVDSRARATIGIVAGGGRIEKPFVKAGNKYHRARTKAWKYPKVRGKAMSAYAHPHGGGSHQQGG--TPVKKNAPPGQKVGFYGSKCTG 236
BLAST of DY260187 vs. ExPASy Swiss-Prot
Match: RL8_ENCCU (60S ribosomal protein L8 OS=Encephalitozoon cuniculi GN=RPL8 PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.273e-44 Identity = 90/205 (43.90%), Postives = 136/205 (66.34%), Query Frame = 1 Query: 118 KGVVPEIIHDPGRGAPLARVTFRHPFPYMKQKELFI-AAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLPKAGNAYHKFRVKPNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTV-RRDAPPGQKVGPN*ARRTG 726 +G V +I+H+ RGAP+A ++F K+ + + A+EGMYTGQ + G A + +GN+ ++++PEG V +VE GD G A +G Y+++++H + + T +K+PSG K + S CR ++G VAGGG +KPL KA A++K + + + +P+VRGVAMNPVEH HGGGNHQH+G +TV ++D QK+G ARRTG Sbjct: 34 EGEVIDIVHERSRGAPVAIISF-------KEDDCMVPASEGMYTGQKILIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVNHRKETNETVIKIPSGKKLTVSSECRCIVGVVAGGGIHDKPLLKASVAHYKAKARGHVFPRVRGVAMNPVEHIHGGGNHQHVGKPTTVSKKDISQEQKIGLVGARRTG 231
BLAST of DY260187 vs. ExPASy Swiss-Prot
Match: RL2_METPE (50S ribosomal protein L2P OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl2p PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.273e-44 Identity = 100/242 (41.32%), Postives = 130/242 (53.72%), Query Frame = 1 Query: 1 RVIPPQRKGAGSVFKSHTHHRKGPAQFPSLHFGERNGYLKGVVPEIIHDPGRGAPLARVTFRHPFPYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLPKAGNAYHKFRVKPNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGPN*ARRTG 726 R+ R G +++ +H K + H G ++GV+ +I HDP R P+A V +K + EG+ G V G +A + GN LP+ IP G+ +CN+E GD G RASG A+II D VK+PSG K S C A +G VAGGGR EKP KAG +HK + + WP+VRGVAMN ++HP GGG HQH G TV R PG+KVG ARRTG Sbjct: 4 RIKTQNRGRGGPTYRAPSHQYKAELK----HLGNDKVTVRGVIIDIEHDPARHTPIALVRLEGE----GKKVYLLVTEGLGVGDQVAWGPEAEVKNGNTLPISKIPTGSYICNIEARPGDGGKFVRASGVQAIIIDKTVDR--VGVKMPSGKMKWFSSRCLATVGVVAGGGRGEKPFVKAGKKFHKVKSQATYWPRVRGVAMNVIDHPFGGGGHQHTGRPKTVSRGTSPGRKVGSVAARRTG 235 The following BLAST results are available for this feature:
BLAST of DY260187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260187 ID=DY260187; Name=DY260187; organism=Citrus clementina; type=EST; length=1040bpback to top |