DY260195
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260195 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 3.143e-42 Identity = 103/250 (41.20%), Postives = 131/250 (52.40%), Query Frame = 1 Query: 142 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNET-MRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPS--PYC--NLNYPCRG--KYYGRGPIQLTWNYNYLXXXXXXXXXXGVVEQSRPSCY*SSTIIQVSNLV-SG*PAQPPKASCHEVITDEWKPSANDLNAGRVPGIRSNHKLLSTRGLNVAQGWDDAVP*PVMGSFTTFRGRLGIPPGYHPDC 867 G+ G + I+SR +F+ +L +RND CPA FYTYDAF+ AA AFP F +G + RE+AAF AQT HETTGGW AP G YAWGYCF E + YC + +PC KYYGRGPIQL++N+NY G P S + Q PK SCH V T +W PSA+D AGRVPG +++ GL G DD V +G + + LG+ + DC Sbjct: 75 GSGGSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNY----GPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIIN-GGLECGHGEDDRVA-DRIGFYKRYCDILGVSYDANLDC 318
BLAST of DY260195 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.560e-41 Identity = 89/189 (47.09%), Postives = 113/189 (59.79%), Query Frame = 1 Query: 160 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLXXXXXXXXXXGVVEQSRPSCY*SSTIIQVSNLV-SG*PAQPPKASCHEVITDEWKPSANDLNAGRVPG 723 +G II+R MFE +L +R D C FYTYDAFI+AA FP FG +GN+ R RE+AAFF QT HETTGGW AP G +AWGYC ++EI+P P YYGRGPIQLT YNY G+ + P S ++ + AQ PK SCH+VIT++W PS +D ++GR+PG Sbjct: 27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPSDP----------PYYGRGPIQLTHKYNY----QLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPG 200
BLAST of DY260195 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 2.331e-37 Identity = 96/243 (39.51%), Postives = 126/243 (51.85%), Query Frame = 1 Query: 142 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLXXXXXXXXXXGVVEQSRPSCY*SSTIIQVSNLV-SG*PAQPPKASCHEVITDEWKPSANDLNAGRVPGIRSNHKLLSTRGLNVAQGWDDAVP*PVMGSFTTFRGRLGIPPGYHPDC 867 GT G I++RE+FE +L +RN+ CPA+GFYTYDAFI AA +FP FG +G++T R +EIAAFF QT HET GG G + GYCF+ +I +YYGRGPIQLT NY +V + P + II + AQ K SCH VI +W PS D A RVPG +++ GL G + AV +G + + G L +P G + DC Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQSD-----------RYYGRGPIQLTHQSNYERAGQGIGVGQDLV--NNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIIN-GGLECNMGPNTAVE-SRIGFYRRYCGMLNVPTGENLDC 244
BLAST of DY260195 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 3.975e-37 Identity = 78/199 (39.20%), Postives = 108/199 (54.27%), Query Frame = 1 Query: 175 SREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCN----LNYPCRGKYYGRGPIQLTWNYNYLXXXXXXXXXXGVVEQSRPSCY*SSTIIQVSNLVSG*PAQPPKASCHEVITDEWKPSANDLNAGRVPGIRSNHKLLSTRG 759 + MFE +LP RN+ CP +GFYTYDA+ A + +P FG +G++ R RE+AAFFAQT ET+G + WGYC ++E++P S YC+ +YPC YYGRGP+QL WNYNY ++++ + + P SCHEVIT EW PS D+ AGR PG +++ G Sbjct: 68 TESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNY--GECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGG 264
BLAST of DY260195 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 5.741e-36 Identity = 92/243 (37.86%), Postives = 123/243 (50.62%), Query Frame = 1 Query: 142 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLXXXXXXXXXXGVVEQSRPSCY*SSTIIQVSNLV-SG*PAQPPKASCHEVITDEWKPSANDLNAGRVPGIRSNHKLLSTRGLNVAQGWDDAVP*PVMGSFTTFRGRLGIPPGYHPDC 867 GT G I++RE+FE +L +RN+ CPA+GFYTYDAFI AA +FP FG +G++T R +EIAAFF QT HET GG G + GYCF+ +I +YYGRGPIQLT NY +V + P + II + Q K SCH VI +W PS D A RVPG +++ + G + A +G + + G L +P G + DC Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD-----------RYYGRGPIQLTHQSNYERAGQGIGVGQELV--NNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQ-FECGMGPNTAAE-SRIGFYRRYCGMLNVPTGENLDC 244
BLAST of DY260195 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.670e-35 Identity = 90/249 (36.14%), Postives = 129/249 (51.81%), Query Frame = 1 Query: 136 GHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNL---NYPC-RGK-YYGRGPIQLTWNYNYLXXXXXXXXXXGVVEQSRPSCY*SSTIIQVSNLVSG*PAQPPKASCHEVITDEWKPSANDLNAGRVPGIRSNHKLLSTRGLNVAQGWDDAVP*PVMGSFTTFRGRLGIPPGYHPDC 867 G+ + I+S +++ L +++D CPARGFYTY +F+ AA FP F +G R RE+AAF AQ HETTGGW AP G YAWG C+ EI+P S YC+ +PC GK Y+GRGPIQ++WN+NY + +C S I + L + K SCH+V+ E++P D+ A R G +++ GL + D V + G + + LG+ G + DC Sbjct: 41 GYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANC---SDIAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVN-GGLECNRAGDARVNNRI-GFYRRYCQVLGVDVGPNLDC 284
BLAST of DY260195 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 2.849e-35 Identity = 92/243 (37.86%), Postives = 128/243 (52.67%), Query Frame = 1 Query: 142 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLXXXXXXXXXXGVVEQSRPSCY*SSTIIQVSNLV-SG*PAQPPKASCHEVITDEWKPSANDLNAGRVPGIRSNHKLLSTRGLNVAQGWDDAVP*PVMGSFTTFRGRLGIPPGYHPDC 867 G+ ++G I++ ++F ++L RND RCPA+GFYTYDAFI AA +FP FG +G++T R +EIAAFF QT HETTGG A G +A GYCF+ E +YGRGPIQLT NY G + P + + + AQ K SCH+VIT +W PSA D +A R PG +++ G+ +G + V +G + + L + PG + DC Sbjct: 13 GSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVRE----------GNQMGSGFYGRGPIQLTGQSNY----DLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIIN-GGIECGKGQNPQVE-DRIGFYRRYCTILNVAPGDNLDC 238
BLAST of DY260195 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 4.860e-35 Identity = 99/262 (37.79%), Postives = 132/262 (50.38%), Query Frame = 1 Query: 100 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNET-MRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEI----SPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLXXXXXXXXXXGVVEQSRPSCY*SSTIIQVSNLV-SG*PAQPPKASCHEVITDEWKPSANDLNAGRVPGIRSNHKLLSTRGLNVAQGWDDAVP*PVMGSFTTFRGRLGIPPGYHPDC 867 C + + +G G +G +I++ +F +LP R++ +CPARGFYTYDAFI AA +FPAFG SG + RE+AAFF QT HETTGG R + ++ WGYCF EI SPP YYGRGPIQLT NY G+ P + ++ + AQ K SCH+VI W PSA D AGRVPG +++ G+ G +DA +G + + LG G + DC Sbjct: 14 CAAASLLAVAASGAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGGTRGS-SDQFQWGYCFKEEINKATSPP-------------YYGRGPIQLTGQSNY----QAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIIN-GGIECGVGQNDANV-DRIGYYKRYCDMLGAGYGSNLDC 253
BLAST of DY260195 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 1.083e-34 Identity = 96/255 (37.65%), Postives = 122/255 (47.84%), Query Frame = 1 Query: 103 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLXXXXXXXXXXGVVEQSRPSCY*SSTIIQVSNLVSG*PAQPPKASCHEVITDEWKPSANDLNAGRVPGIRSNHKLLSTRGLNVAQGWDDAVP*PVMGSFTTFRGRLGIPPGYHPDC 867 G G G G G G L II MF+D+L YRND +CPA GFYTY+AFI AAK FP FGN+G++ MR REIAAF QT HET G W A G +Y WGYC + N NY G +Q +VE + ++ ++ Q PK SCH VIT+ W PSA D AGRVPG +++ G+ QG + +G + T+ LG G + DC Sbjct: 66 GGGGGGGGGGGGGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYC----------HMNYNYGLCGDDLNLPLLQ----------------EPELVETDPFIAFKTALWFWMT-------PQSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIIN-GGIECGQGGPNNANENRIGFYKTYCDSLGTTYGSNLDC 286
BLAST of DY260195 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 7.017e-34 Identity = 91/237 (38.40%), Postives = 121/237 (51.05%), Query Frame = 1 Query: 160 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLXXXXXXXXXXGVVEQSRPSCY*SSTIIQVSNLV-SG*PAQPPKASCHEVITDEWKPSANDLNAGRVPGIRSNHKLLSTRGLNVAQGWDDAVP*PVMGSFTTFRGRLGIPPGYHPDC 867 +G I++ ++F ++L RND RCPA GFYTYDAFI AA +FP FG +G++T R +EIAAFF QT HETTGG A + GYCF+ + +YYGRGPIQLT NY G + P + I + Q K S H+VI W PSA D A RVPG +++ G+ G +DAV +G + + G L + PG + DC Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD-----------RYYGRGPIQLTNRNNY----EKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIIN-GGIECGIGRNDAVE-DRIGYYRRYCGMLNVAPGENLDC 244 The following BLAST results are available for this feature:
BLAST of DY260195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260195 ID=DY260195; Name=DY260195; organism=Citrus clementina; type=EST; length=1170bpback to top |