DY260199

Overview
NameDY260199
Unique NameDY260199
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1029
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_RAT (Elongation factor 2 OS=Rattus norvegicus GN=Eef2 PE=1 SV=4)

HSP 1 Score: 311.997 bits (798), Expect = 3.614e-84
Identity = 156/236 (66.10%), Postives = 188/236 (79.66%), Query Frame = 1 
Query:   43 MVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY---EDPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASQF 741
            MV FT +++R IMD   NIRNMSVIAHVDHGKSTLTDSLV  AGIIA   AG+ R TDTR+DE ER ITIKST ISL+YE+++  L   K  + G+ +LINLIDSPGHVDFSSEVTAALR+TDGALVVVDC+ GVCVQTETVLRQA+ ERI+PVL +NKMDR  LELQ++ EE YQTFQ+++EN NVI++TY   E   +G++ + P  GTV F +GLHGWAFTL  FA+MY ++F
Sbjct:    1 MVNFTVDQIRAIMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGIIASARAGETRFTDTRKDEQERCITIKSTAISLFYELSENDLNFIKQSKDGSGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLMMNKMDRALLELQLEPEELYQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVAKF 236
[Close]
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_MOUSE (Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 SV=2)

HSP 1 Score: 311.997 bits (798), Expect = 3.614e-84
Identity = 156/236 (66.10%), Postives = 188/236 (79.66%), Query Frame = 1 
Query:   43 MVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY---EDPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASQF 741
            MV FT +++R IMD   NIRNMSVIAHVDHGKSTLTDSLV  AGIIA   AG+ R TDTR+DE ER ITIKST ISL+YE+++  L   K  + G+ +LINLIDSPGHVDFSSEVTAALR+TDGALVVVDC+ GVCVQTETVLRQA+ ERI+PVL +NKMDR  LELQ++ EE YQTFQ+++EN NVI++TY   E   +G++ + P  GTV F +GLHGWAFTL  FA+MY ++F
Sbjct:    1 MVNFTVDQIRAIMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGIIASARAGETRFTDTRKDEQERCITIKSTAISLFYELSENDLNFIKQSKDGSGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLMMNKMDRALLELQLEPEELYQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVAKF 236
[Close]
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_MESAU (Elongation factor 2 OS=Mesocricetus auratus GN=EEF2 PE=2 SV=3)

HSP 1 Score: 311.997 bits (798), Expect = 3.614e-84
Identity = 156/236 (66.10%), Postives = 188/236 (79.66%), Query Frame = 1 
Query:   43 MVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY---EDPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASQF 741
            MV FT +++R IMD   NIRNMSVIAHVDHGKSTLTDSLV  AGIIA   AG+ R TDTR+DE ER ITIKST ISL+YE+++  L   K  + G+ +LINLIDSPGHVDFSSEVTAALR+TDGALVVVDC+ GVCVQTETVLRQA+ ERI+PVL +NKMDR  LELQ++ EE YQTFQ+++EN NVI++TY   E   +G++ + P  GTV F +GLHGWAFTL  FA+MY ++F
Sbjct:    1 MVNFTVDQIRAIMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGIIASARAGETRFTDTRKDEQERCITIKSTAISLFYELSENDLNFIKQSKDGSGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLMMNKMDRALLELQLEPEELYQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVAKF 236
[Close]
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_CRIGR (Elongation factor 2 OS=Cricetulus griseus GN=EEF2 PE=3 SV=3)

HSP 1 Score: 311.997 bits (798), Expect = 3.614e-84
Identity = 156/236 (66.10%), Postives = 188/236 (79.66%), Query Frame = 1 
Query:   43 MVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY---EDPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASQF 741
            MV FT +++R IMD   NIRNMSVIAHVDHGKSTLTDSLV  AGIIA   AG+ R TDTR+DE ER ITIKST ISL+YE+++  L   K  + G+ +LINLIDSPGHVDFSSEVTAALR+TDGALVVVDC+ GVCVQTETVLRQA+ ERI+PVL +NKMDR  LELQ++ EE YQTFQ+++EN NVI++TY   E   +G++ + P  GTV F +GLHGWAFTL  FA+MY ++F
Sbjct:    1 MVNFTVDQIRAIMDKEANIRNMSVIAHVDHGKSTLTDSLVCKAGIIASARAGETRFTDTRKDEQERCITIKSTAISLFYELSENDLNFIKQSKDGSGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLMMNKMDRALLELQLEPEELYQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVAKF 236
[Close]
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_BOVIN (Elongation factor 2 OS=Bos taurus GN=EEF2 PE=2 SV=3)

HSP 1 Score: 311.997 bits (798), Expect = 3.614e-84
Identity = 156/236 (66.10%), Postives = 188/236 (79.66%), Query Frame = 1 
Query:   43 MVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY---EDPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASQF 741
            MV FT +++R IMD   NIRNMSVIAHVDHGKSTLTDSLV  AGIIA   AG+ R TDTR+DE ER ITIKST ISL+YE+++  L   K  + G+ +LINLIDSPGHVDFSSEVTAALR+TDGALVVVDC+ GVCVQTETVLRQA+ ERI+PVL +NKMDR  LELQ++ EE YQTFQ+++EN NVI++TY   E   +G++ + P  GTV F +GLHGWAFTL  FA+MY ++F
Sbjct:    1 MVNFTVDQIRAIMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGIIASARAGETRFTDTRKDEQERCITIKSTAISLFYELSENDLNFIKQSKDGSGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLMMNKMDRALLELQLEPEELYQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVAKF 236
[Close]
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_PONAB (Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 SV=3)

HSP 1 Score: 310.842 bits (795), Expect = 8.052e-84
Identity = 156/236 (66.10%), Postives = 187/236 (79.24%), Query Frame = 1 
Query:   43 MVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY---EDPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASQF 741
            MV FT +++R IMD   NIRNMSVIAHVDHGKSTLTDSLV  AGIIA   AG+ R TDTR+DE ER ITIKST ISL+YE+++  L   K  + G  +LINLIDSPGHVDFSSEVTAALR+TDGALVVVDC+ GVCVQTETVLRQA+ ERI+PVL +NKMDR  LELQ++ EE YQTFQ+++EN NVI++TY   E   +G++ + P  GTV F +GLHGWAFTL  FA+MY ++F
Sbjct:    1 MVNFTVDQIRAIMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGIIASARAGETRFTDTRKDEQERCITIKSTAISLFYELSENDLNFIKQSKDGAGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLMMNKMDRALLELQLEPEELYQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVAKF 236
[Close]
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_HUMAN (Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 SV=4)

HSP 1 Score: 310.842 bits (795), Expect = 8.052e-84
Identity = 156/236 (66.10%), Postives = 187/236 (79.24%), Query Frame = 1 
Query:   43 MVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY---EDPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASQF 741
            MV FT +++R IMD   NIRNMSVIAHVDHGKSTLTDSLV  AGIIA   AG+ R TDTR+DE ER ITIKST ISL+YE+++  L   K  + G  +LINLIDSPGHVDFSSEVTAALR+TDGALVVVDC+ GVCVQTETVLRQA+ ERI+PVL +NKMDR  LELQ++ EE YQTFQ+++EN NVI++TY   E   +G++ + P  GTV F +GLHGWAFTL  FA+MY ++F
Sbjct:    1 MVNFTVDQIRAIMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGIIASARAGETRFTDTRKDEQERCITIKSTAISLFYELSENDLNFIKQSKDGAGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLMMNKMDRALLELQLEPEELYQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVAKF 236
[Close]
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_CALJA (Elongation factor 2 OS=Callithrix jacchus GN=EEF2 PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 8.052e-84
Identity = 156/236 (66.10%), Postives = 187/236 (79.24%), Query Frame = 1 
Query:   43 MVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY---EDPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASQF 741
            MV FT +++R IMD   NIRNMSVIAHVDHGKSTLTDSLV  AGIIA   AG+ R TDTR+DE ER ITIKST ISL+YE+++  L   K  + G  +LINLIDSPGHVDFSSEVTAALR+TDGALVVVDC+ GVCVQTETVLRQA+ ERI+PVL +NKMDR  LELQ++ EE YQTFQ+++EN NVI++TY   E   +G++ + P  GTV F +GLHGWAFTL  FA+MY ++F
Sbjct:    1 MVNFTVDQIRAIMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGIIASARAGETRFTDTRKDEQERCITIKSTAISLFYELSENDLNFIKQSKDGAGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLMMNKMDRALLELQLEPEELYQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVAKF 236
[Close]
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_DICDI (Elongation factor 2 OS=Dictyostelium discoideum GN=efbA PE=1 SV=2)

HSP 1 Score: 310.071 bits (793), Expect = 1.373e-83
Identity = 158/257 (61.48%), Postives = 195/257 (75.88%), Query Frame = 1 
Query:   43 MVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASQFGVDESKMMERPGGENLL*PRLQEW 813
            MV FT +++R IMD   NIRNMSVIAHVDHGK+TL+DSL+  AGIIA +V+GD+R    R DE ERGITIKS+ +SL++EM              +E+LINLIDSPGHVDFSSEVTAALR+TDGALVV+DC+EGVCVQTETVLRQA+ ERI+PVL VNK+DR  LELQ++ EEAY +F++ IE+ NVI+   ED   G V V PEKGTVAF +GLHGW FTL  FAK+YA++FGV E K+M R  G++      ++W
Sbjct:    1 MVNFTIDQIRAIMDRRENIRNMSVIAHVDHGKTTLSDSLIQRAGIIADKVSGDMRYMSCRADEQERGITIKSSSVSLHFEMPKE--DKLPAGCTSHEFLINLIDSPGHVDFSSEVTAALRVTDGALVVIDCVEGVCVQTETVLRQAVAERIKPVLFVNKVDRFLLELQLNTEEAYLSFRRAIESVNVIVGNTEDKEFGDVTVSPEKGTVAFGSGLHGWGFTLGRFAKLYAAKFGVPEDKLMGRLWGDSYFDATAKKW 255
[Close]
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_BLAHO (Elongation factor 2 OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 5.770e-82
Identity = 160/275 (58.18%), Postives = 196/275 (71.27%), Query Frame = 1 
Query:   43 MVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKG----------------ERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLT--VNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASQFGVDESKMMERPGGENLL*PRLQEW 813
            MV FT +++R +M+  HNIRN+SV+AHVDHGKSTLTD+LV+ AGII+++ AGD R TDTR DE ER ITIKSTGISLY+E     +                     E + N YLINLIDSPGHVDFSSEVTA+LR+TDGALVVVD + GVCVQTETVLRQAL ERIRPVL+   NK+DR   ELQ+D EEAY    K +E+ NVI+ATY D  +G +QVYP +GTVAF +GL  W FT   FA++YA +FG+DE+KMMER  G+       ++W
Sbjct:    1 MVNFTIDQIRHMMNMTHNIRNLSVVAHVDHGKSTLTDALVSKAGIISKKAAGDARFTDTRADEQERCITIKSTGISLYFEYDPETIDKQAAAPLNPTEEGDPTEEDIEIKQNSYLINLIDSPGHVDFSSEVTASLRVTDGALVVVDSVGGVCVQTETVLRQALAERIRPVLSCMCNKLDRVIAELQLDPEEAYHKLMKSVESVNVIIATYPDEAVGDIQVYPNQGTVAFGSGLQQWGFT-RKFARLYAKKFGIDETKMMERLWGDYFFDAENKKW 274
The following BLAST results are available for this feature:
BLAST of DY260199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF2_RAT3.614e-8466.10Elongation factor 2 OS=Rattus norvegicus GN=Eef2 P... [more]
EF2_MOUSE3.614e-8466.10Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 S... [more]
EF2_MESAU3.614e-8466.10Elongation factor 2 OS=Mesocricetus auratus GN=EEF... [more]
EF2_CRIGR3.614e-8466.10Elongation factor 2 OS=Cricetulus griseus GN=EEF2 ... [more]
EF2_BOVIN3.614e-8466.10Elongation factor 2 OS=Bos taurus GN=EEF2 PE=2 SV=... [more]
EF2_PONAB8.052e-8466.10Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 S... [more]
EF2_HUMAN8.052e-8466.10Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 S... [more]
EF2_CALJA8.052e-8466.10Elongation factor 2 OS=Callithrix jacchus GN=EEF2 ... [more]
EF2_DICDI1.373e-8361.48Elongation factor 2 OS=Dictyostelium discoideum GN... [more]
EF2_BLAHO5.770e-8258.18Elongation factor 2 OS=Blastocystis hominis PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YK14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260199 ID=DY260199; Name=DY260199; organism=Citrus clementina; type=EST; length=1029bp
AGAAATACTGTCCTTGTTGGTAATATTTGAGAATCAGTCAAGATGGTGAA
GTTCACAGCAGAAGAGCTCCGGCGTATTATGGACTTCCCACATAACATCC
GCAATATGTCTGTTATTGCCCATGTTGATCATGGGAAGTCAACCCTTACC
GACTCTCTTGTGGCTGCTGCTGGTATTATCGCCCAAGAAGTTGCTGGCGA
TGTCCGTATGACAGATACTCGTCAGGATGAAGCTGAGCGTGGTATTACAA
TCAAGTCTACTGGTATATCTCTCTACTACGAGATGACTGATGCGGCTTTG
AAGAGCTTCAAGGGAGAGCGTCAAGGGAATGAATACCTCATCAACCTTAT
TGATTCCCCTGGGCACGTCGATTTCTCATCTGAGGTTACAGCTGCCCTTC
GTATCACTGATGGTGCACTTGTGGTCGTAGACTGCATTGAAGGTGTTTGT
GTCCAAACAGAAACTGTGCTTAGACAAGCCCTGGGTGAAAGGATTAGGCC
AGTCTTGACTGTGAACAAGATGGACAGGTGCTTCCTTGAGCTTCAGGTTG
ACGGTGAAGAGGCTTACCAGACTTTCCAGAAAGTGATTGAGAATGCTAAT
GTCATTATGGCTACCTATGAAGATCCCCTCCTTGGCCATGTTCAGGTTTA
CCCTGAAAAGGGAACAGTTGCTTTCTCTGCTGGTTTGCATGGCTGGGCCT
TTACCCTGACAAATTTTGCCAAGATGTATGCCTCCCAGTTCGGAGTTGAT
GAGTCAAAGATGATGGAGAGGCCCGGGGGTGAGAACCTCCTTTGACCCCG
CCTCCAGGAATGGGACCCACCAGAACCACTGGCCCCCCCCCCTTGCAAGC
CTGGGTTTGGTCCCGTTCCCGCCAAGAAACCCCCCAAGCCAAAATCCCCC
ACCTTTTGCCTGAATGAGGGAAAAAAAAAAAACCCGGGGGCCTTAAGTTT
CCAAAAGCCTGGGTGGCCCCCGATGGAAAGTTCCCAAAGAAAAAAGAGAT
TGGAAGGGGTAAAGGGCATTTGGACGAAC
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