DY260199

Overview
NameDY260199
Unique NameDY260199
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1029
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_METB6 (Elongation factor 2 OS=Methanoregula boonei (strain 6A8) GN=fusA PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 4.615e-47
Identity = 101/226 (44.69%), Postives = 145/226 (64.16%), Query Frame = 1
Query:   49 KFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENAN-VIMATYEDPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAK 723
            K T E +  +M  P +IRN+ ++AH+DHGK+TL+D+L+A AGII++E+AG     D+  +E  RGITI ++ +S+ +E+            +G +YLIN+ID+PGHVDF  +VT A+R  DGA+V+VD +EG   QTETVLRQAL E++RPVL +NK+DR   EL+VD  E      KVI+  N +I    ED      ++   KGTVAF + L+ WA ++    K
Sbjct:    5 KKTVERVVELMKDPKHIRNIGIVAHIDHGKTTLSDNLLAGAGIISEELAGKQLFMDSDAEEQARGITIDASNVSMVHEV------------EGQDYLINMIDTPGHVDFGGDVTRAMRAVDGAVVLVDAVEGTMPQTETVLRQALKEQVRPVLFINKVDRLVNELKVDETEMQIRLGKVIDKVNKLIKGMNEDLYNNGWKLDASKGTVAFGSALYNWAVSVPYMKK 218          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_METBU (Elongation factor 2 OS=Methanococcoides burtonii (strain DSM 6242) GN=fusA PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 6.027e-47
Identity = 101/226 (44.69%), Postives = 144/226 (63.72%), Query Frame = 1
Query:   49 KFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENAN-VIMATYEDPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAK 723
            K   E +  +M  P  IRN+ ++AH+DHGK+TL+D+L+A AG+I++E+AG     D+  +E ERGITI S+ +S+ +E             +G EYLINLID+PGHVDF  +VT A+R  DGA+VV+D +EG   QTETVLRQAL E ++PVL +NK+DR   ELQVD +E      K+I++ N +I    E+      +V   +GTVAF + L+ WA ++    K
Sbjct:    5 KKMVERVTALMSNPLMIRNIGIVAHIDHGKTTLSDNLLAGAGMISKELAGRQLFMDSDAEEQERGITIDSSNVSMVHEY------------EGKEYLINLIDTPGHVDFGGDVTRAMRAVDGAVVVIDAVEGTMPQTETVLRQALKEHVKPVLFINKVDRLINELQVDDQEMQIRLGKLIDHVNKLIKGMNEERYNAGWRVDAAEGTVAFGSALYNWAISVPMMKK 218          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_HALSA (Elongation factor 2 OS=Halobacterium salinarium GN=fusA PE=3 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 7.872e-47
Identity = 101/227 (44.49%), Postives = 142/227 (62.56%), Query Frame = 1
Query:   49 KFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIM--ATYEDPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAK 723
            K   E+  R+MD P  IRN+++ AHVDHGK+TLTD+L+A AG+I+++ AG     DT +DE ERGITI +  +S+ +E             +G+++LINLID+PGHVDF  +VT A+R  DGALVVVD +EG   QTETV+RQAL E ++P L +NK+DR   ELQ   EE  +    VI + N ++   T E   +    V  E GTVAF + L+ W  ++ +  +
Sbjct:    5 KKIVEQCERLMDNPEQIRNIAIAAHVDHGKTTLTDNLLAGAGMISEDTAGQQLAMDTEEDEQERGITIDAANVSMTHEY------------EGDDHLINLIDTPGHVDFGGDVTRAMRAVDGALVVVDAVEGAMPQTETVVRQALREGVKPTLFINKVDRLISELQEGPEEMQERLLSVIGDVNELIRGMTEEKDDIEDWTVSVEDGTVAFGSALYKWGVSMPSMQR 219          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_HALS3 (Elongation factor 2 OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=fusA PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 7.872e-47
Identity = 101/227 (44.49%), Postives = 142/227 (62.56%), Query Frame = 1
Query:   49 KFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIM--ATYEDPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAK 723
            K   E+  R+MD P  IRN+++ AHVDHGK+TLTD+L+A AG+I+++ AG     DT +DE ERGITI +  +S+ +E             +G+++LINLID+PGHVDF  +VT A+R  DGALVVVD +EG   QTETV+RQAL E ++P L +NK+DR   ELQ   EE  +    VI + N ++   T E   +    V  E GTVAF + L+ W  ++ +  +
Sbjct:    5 KKIVEQCERLMDNPEQIRNIAIAAHVDHGKTTLTDNLLAGAGMISEDTAGQQLAMDTEEDEQERGITIDAANVSMTHEY------------EGDDHLINLIDTPGHVDFGGDVTRAMRAVDGALVVVDAVEGAMPQTETVVRQALREGVKPTLFINKVDRLISELQEGPEEMQERLLSVIGDVNELIRGMTEEKDDIEDWTVSVEDGTVAFGSALYKWGVSMPSMQR 219          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_NATPD (Elongation factor 2 OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=fusA PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.343e-46
Identity = 106/243 (43.62%), Postives = 144/243 (59.26%), Query Frame = 1
Query:   49 KFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVI---MATYEDPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASQFGVDESKMME 768
            K   +E  R+MD P  IRN+++ AHVDHGK+TLTD+L+A AG+I+ E AG+    DT +DE ERGITI +  +S+ +E  D              +LINLID+PGHVDF  +VT A+R  DGALVVVD +EG   QTETVLRQAL E ++P L +NK+DR   ELQ   EE  Q    VI + N +   M    D +     V  E GTV F + L+ W  ++ +  +      G+D  +++E
Sbjct:    5 KKIVQECERLMDEPEQIRNIAIAAHVDHGKTTLTDNLLAGAGMISDETAGEQLAMDTEEDEQERGITIDAANVSMTHEYED------------ENHLINLIDTPGHVDFGGDVTRAMRAVDGALVVVDAVEGAMPQTETVLRQALREGVKPTLFINKVDRLISELQEGPEEMQQRLTGVIGDVNELIRGMTEEMDDINEDWTVSVEDGTVGFGSALYKWGVSMPSMQRT-----GMDFGEIIE 230          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_SULAC (Elongation factor 2 OS=Sulfolobus acidocaldarius GN=fusA PE=1 SV=3)

HSP 1 Score: 186.808 bits (473), Expect = 1.754e-46
Identity = 95/219 (43.38%), Postives = 141/219 (64.38%), Query Frame = 1
Query:   55 TAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDP-LLGHVQVYPEKGTVAFSAGLHGWAFTL 708
            T E++  +M     +RN+ +IAHVDHGK+T +D+L+AA+GII+Q+VAG+    D    E +RGIT+K+  ISLY+E+             G  Y+INLID+PGHVDFS  VT +LR+ DG++VV+D +EG+  QTETVLRQ+L ER+RP+L +NK+DR   EL++  +E  +    +I   N ++ TY +P      ++ PE G V F +    W F++
Sbjct:    6 TVEQVLSLMKDVTRVRNIGIIAHVDHGKTTTSDTLLAASGIISQKVAGEALALDYLSVEQQRGITVKAANISLYHEI------------DGKGYVINLIDTPGHVDFSGRVTRSLRVLDGSIVVIDAVEGIMTQTETVLRQSLEERVRPILFINKVDRLIKELKLSSQEIQKRLIDLIIEVNNLIETYGEPEFKDQWKIKPELGNVVFGSAKDKWGFSV 212          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_HALMA (Elongation factor 2 OS=Haloarcula marismortui GN=fusA PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.754e-46
Identity = 105/248 (42.34%), Postives = 149/248 (60.08%), Query Frame = 1
Query:   49 KFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIM--ATYEDPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASQFGVDESKMMERPGGEN 786
            K   +E   +MD P +IRN+++ AHVDHGK+TLTD+L+A AG+I+ + AG+    DT +DE ERGITI +  +S+ +E  D              +LINLID+PGHVDF  +VT A+R  DGALVVVD +EG   QTETVLRQAL E ++P L +NK+DR   ELQ   EE  +    VI++ N ++   T E   +    V  E+GTV F + L+ W  ++ +  +      G+D  ++ME    +N
Sbjct:    5 KKIVQECETLMDDPEHIRNIAIAAHVDHGKTTLTDNLLAGAGMISDDTAGEQLAMDTEEDEQERGITIDAANVSMTHEYED------------QNHLINLIDTPGHVDFGGDVTRAMRAVDGALVVVDAVEGAMPQTETVLRQALREGVKPTLFINKVDRLISELQEGPEEMQKRLLAVIQDVNDLIRGMTEEMDDIEDWTVSVEEGTVGFGSALYKWGVSMPSMQRT-----GMDFGEIMELERADN 235          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_SULTO (Elongation factor 2 OS=Sulfolobus tokodaii GN=fusA PE=3 SV=3)

HSP 1 Score: 186.037 bits (471), Expect = 2.991e-46
Identity = 102/246 (41.46%), Postives = 151/246 (61.38%), Query Frame = 1
Query:   55 TAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGHV-QVYPEKGTVAFSAGLHGWAFTL-------TNFAKMYASQFGVDESKMME 768
            T E++  +M     +RN+ +IAHVDHGK+T +D+L+AAAGII+Q+VAG+    D    E +RGIT+K+  ISLY+E+            +G  Y+INLID+PGHVDFS  VT +LRI DG++VVVD +EG+  QTETVLRQ+L ER+RP+L +NK+DR   EL++  +E  +    +I   N ++  Y +P      ++ PE G V F +    W F++         F+ +  +    D+SK+ E
Sbjct:    6 TVEQVLSLMKDITRVRNIGIIAHVDHGKTTTSDTLLAAAGIISQKVAGEALALDYLSVEQQRGITVKAANISLYHEI------------EGKGYVINLIDTPGHVDFSGRVTRSLRILDGSIVVVDAVEGIMTQTETVLRQSLEERVRPILFINKVDRLVKELKLSPQEIQKKLIDMIVEINNLIEMYAEPEYKDAWKIKPELGNVVFGSAKDKWGFSVPIAQKKGVKFSDVVNAYSSGDKSKVEE 239          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_METTE (Elongation factor 2 OS=Methanosarcina thermophila GN=fusA PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.991e-46
Identity = 99/226 (43.81%), Postives = 142/226 (62.83%), Query Frame = 1
Query:   49 KFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYE-DPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAK 723
            K   E +  +M+ P  IRN+ ++AH+DHGK+TL+D+L+A AG+I++E+AG     D+ ++E ERGITI ++ +S+ +   +             +YLINLID+PGHVDF  +VT A+R  DGA+VVVD +EG   QTETVLRQAL E +RPVL VNK+DR   ELQVD +E      KVI++ N ++     +      +V    GTVAF + L+ WA ++    K
Sbjct:    5 KKMVERVTTLMNEPEKIRNIGIVAHIDHGKTTLSDNLLAGAGMISKELAGRQLFMDSDEEEQERGITIDASNVSMVHTYNN------------EDYLINLIDTPGHVDFGGDVTRAMRAVDGAVVVVDAVEGTMPQTETVLRQALREHVRPVLFVNKVDRLINELQVDSQEMQVRLGKVIDHVNKLIKNMNPEKFKAGWKVDAAAGTVAFGSALYNWAISVPMMQK 218          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_METS5 (Elongation factor 2 OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=fusA PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 5.102e-46
Identity = 96/219 (43.84%), Postives = 140/219 (63.93%), Query Frame = 1
Query:   55 TAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGHV-QVYPEKGTVAFSAGLHGWAFTL 708
            T+E++  +M     +RN+ +IAHVDHGK+T +D L+AA+GII+ +VAG+    D    E +RGIT+K+  +SLY+E+            +G  Y+INLID+PGHVDFS  VT +LR+ DG++VVVD +EGV  QTETVLRQ+L ER+RP+L VNK+DR   EL++  +E  Q    +I+  N ++  Y +P L     + P  G V F +    W F++
Sbjct:    6 TSEQVLSLMKDRTRVRNIGIIAHVDHGKTTTSDQLLAASGIISPKVAGEALALDYLSVEQQRGITVKAANVSLYHEV------------EGKGYVINLIDTPGHVDFSGRVTRSLRVLDGSIVVVDSVEGVMTQTETVLRQSLEERVRPILFVNKVDRLVKELKLGPQEMMQKLMDIIKEVNNLINIYAEPELKEKWAINPTLGNVVFGSAKDRWGFSI 212          
The following BLAST results are available for this feature:
BLAST of DY260199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF2_METB64.615e-4744.69Elongation factor 2 OS=Methanoregula boonei (strai... [more]
EF2_METBU6.027e-4744.69Elongation factor 2 OS=Methanococcoides burtonii (... [more]
EF2_HALSA7.872e-4744.49Elongation factor 2 OS=Halobacterium salinarium GN... [more]
EF2_HALS37.872e-4744.49Elongation factor 2 OS=Halobacterium salinarum (st... [more]
EF2_NATPD1.343e-4643.62Elongation factor 2 OS=Natronomonas pharaonis (str... [more]
EF2_SULAC1.754e-4643.38Elongation factor 2 OS=Sulfolobus acidocaldarius G... [more]
EF2_HALMA1.754e-4642.34Elongation factor 2 OS=Haloarcula marismortui GN=f... [more]
EF2_SULTO2.991e-4641.46Elongation factor 2 OS=Sulfolobus tokodaii GN=fusA... [more]
EF2_METTE2.991e-4643.81Elongation factor 2 OS=Methanosarcina thermophila ... [more]
EF2_METS55.102e-4643.84Elongation factor 2 OS=Metallosphaera sedula (stra... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YK14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260199 ID=DY260199; Name=DY260199; organism=Citrus clementina; type=EST; length=1029bp
AGAAATACTGTCCTTGTTGGTAATATTTGAGAATCAGTCAAGATGGTGAA
GTTCACAGCAGAAGAGCTCCGGCGTATTATGGACTTCCCACATAACATCC
GCAATATGTCTGTTATTGCCCATGTTGATCATGGGAAGTCAACCCTTACC
GACTCTCTTGTGGCTGCTGCTGGTATTATCGCCCAAGAAGTTGCTGGCGA
TGTCCGTATGACAGATACTCGTCAGGATGAAGCTGAGCGTGGTATTACAA
TCAAGTCTACTGGTATATCTCTCTACTACGAGATGACTGATGCGGCTTTG
AAGAGCTTCAAGGGAGAGCGTCAAGGGAATGAATACCTCATCAACCTTAT
TGATTCCCCTGGGCACGTCGATTTCTCATCTGAGGTTACAGCTGCCCTTC
GTATCACTGATGGTGCACTTGTGGTCGTAGACTGCATTGAAGGTGTTTGT
GTCCAAACAGAAACTGTGCTTAGACAAGCCCTGGGTGAAAGGATTAGGCC
AGTCTTGACTGTGAACAAGATGGACAGGTGCTTCCTTGAGCTTCAGGTTG
ACGGTGAAGAGGCTTACCAGACTTTCCAGAAAGTGATTGAGAATGCTAAT
GTCATTATGGCTACCTATGAAGATCCCCTCCTTGGCCATGTTCAGGTTTA
CCCTGAAAAGGGAACAGTTGCTTTCTCTGCTGGTTTGCATGGCTGGGCCT
TTACCCTGACAAATTTTGCCAAGATGTATGCCTCCCAGTTCGGAGTTGAT
GAGTCAAAGATGATGGAGAGGCCCGGGGGTGAGAACCTCCTTTGACCCCG
CCTCCAGGAATGGGACCCACCAGAACCACTGGCCCCCCCCCCTTGCAAGC
CTGGGTTTGGTCCCGTTCCCGCCAAGAAACCCCCCAAGCCAAAATCCCCC
ACCTTTTGCCTGAATGAGGGAAAAAAAAAAAACCCGGGGGCCTTAAGTTT
CCAAAAGCCTGGGTGGCCCCCGATGGAAAGTTCCCAAAGAAAAAAGAGAT
TGGAAGGGGTAAAGGGCATTTGGACGAAC
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