DY260199
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_SYNPX (GTP-binding protein lepA OS=Synechococcus sp. (strain WH8102) GN=lepA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.952e-21 Identity = 60/143 (41.96%), Postives = 82/143 (57.34%), Query Frame = 1 Query: 97 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 525 IRN +IAH+DHGKSTL D L+ G +A + + D E ERGITIK + Y TD G +Y++NLID+PGHVDFS EV+ +L+ +GAL+VVD +GV QT + AL + + +NK+D Sbjct: 9 IRNFCIIAHIDHGKSTLADRLLQDTGTVANRDMQE-QFLDNMDLERERGITIKLQAARMNYTATD-----------GQQYVLNLIDTPGHVDFSYEVSRSLQACEGALLVVDASQGVEAQTLANVYLALDNDLEIIPVLNKID 139
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_RICAH (GTP-binding protein lepA OS=Rickettsia akari (strain Hartford) GN=lepA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.952e-21 Identity = 62/144 (43.06%), Postives = 86/144 (59.72%), Query Frame = 1 Query: 97 IRNMSVIAHVDHGKSTLTDSLVA-AAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 525 IRN S+IAH+DHGKSTL D L+ G+ A+E+ V D+ E ERGITIK+ + L Y+ D GN Y +NL+D+PGHVDF+ EV+ +L +G+L+VVD +GV QT + QA+ V +NK+D Sbjct: 7 IRNFSIIAHIDHGKSTLADRLIEHCGGLQAREMRTQV--LDSMDIEKERGITIKAQTVRLVYKAKD-----------GNTYYLNLMDTPGHVDFAYEVSRSLAACEGSLLVVDSTQGVEAQTLANVYQAIEHDHEIVPVLNKID 137
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_RHILO (GTP-binding protein lepA OS=Rhizobium loti GN=lepA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.952e-21 Identity = 57/144 (39.58%), Postives = 87/144 (60.42%), Query Frame = 1 Query: 94 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 525 +IRN S++AH+DHGKSTL D L+ + G + + ++ D+ E ERGITIK+ + L Y + G +Y++NLID+PGHVDF+ EV+ +L +G+L+VVD +GV QT + QA+ V+ +NK+D Sbjct: 7 HIRNFSIVAHIDHGKSTLADRLIQSTGGLELRDMKE-QVLDSMDIERERGITIKAQTVRLKYRANN-----------GEDYILNLIDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTLANVYQAIDNNHEIVVVLNKVD 138
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_RALSO (GTP-binding protein lepA OS=Ralstonia solanacearum GN=lepA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.952e-21 Identity = 65/165 (39.39%), Postives = 91/165 (55.15%), Query Frame = 1 Query: 94 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVI 588 NIRN S+IAH+DHGKSTL D ++ G ++ + ++ D+ E ERGITIK+ +L Y+ D G Y +NLID+PGHVDFS EV+ +L +GAL+VVD +GV QT A+ + V +NK+D D + A Q + VI Sbjct: 3 NIRNFSIIAHIDHGKSTLADRIIQLCGGLSDREM-EAQVLDSMDIEKERGITIKAQTAALSYKARD-----------GKVYNLNLIDTPGHVDFSYEVSRSLSACEGALLVVDASQGVEAQTVANCYTAIELGVEVVPVLNKIDL----PAADPDSAIQEIEDVI 151
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_RALPJ (GTP-binding protein lepA OS=Ralstonia pickettii (strain 12J) GN=lepA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.952e-21 Identity = 65/165 (39.39%), Postives = 91/165 (55.15%), Query Frame = 1 Query: 94 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVI 588 NIRN S+IAH+DHGKSTL D ++ G ++ + ++ D+ E ERGITIK+ +L Y+ D G Y +NLID+PGHVDFS EV+ +L +GAL+VVD +GV QT A+ + V +NK+D D + A Q + VI Sbjct: 3 NIRNFSIIAHIDHGKSTLADRIIQLCGGLSDREM-EAQVLDSMDIEKERGITIKAQTAALSYKARD-----------GKVYNLNLIDTPGHVDFSYEVSRSLSACEGALLVVDASQGVEAQTVANCYTAIELGVEVVPVLNKIDL----PAADPDNAIQEIEDVI 151
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_PSEMY (GTP-binding protein lepA OS=Pseudomonas mendocina (strain ymp) GN=lepA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.952e-21 Identity = 62/166 (37.35%), Postives = 95/166 (57.23%), Query Frame = 1 Query: 94 NIRNMSVIAHVDHGKSTLTDSLVA-AAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVI 588 +IRN S+IAH+DHGKSTL D + G+ A+E+ + ++ D+ E ERGITIK+ ++L+Y+ D G Y +N ID+PGHVDF+ EV+ +L +GAL+VVD +GV Q+ A+ + + + +NKMD Q D + +K+I Sbjct: 6 HIRNFSIIAHIDHGKSTLADRFIQMCGGLAAREM--EAQVLDSMDLERERGITIKAHSVTLHYKAKD-----------GKTYQLNFIDTPGHVDFTYEVSRSLAACEGALLVVDAGQGVEAQSVANCYTAIEQGLEVMPVLNKMDL----PQADPDRVKDEIEKII 154
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_PSEE4 (GTP-binding protein lepA OS=Pseudomonas entomophila (strain L48) GN=lepA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.952e-21 Identity = 62/166 (37.35%), Postives = 95/166 (57.23%), Query Frame = 1 Query: 94 NIRNMSVIAHVDHGKSTLTDSLVA-AAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVI 588 +IRN S+IAH+DHGKSTL D + G+ A+E+ + ++ D+ E ERGITIK+ ++L+Y+ D G Y +N ID+PGHVDF+ EV+ +L +GAL+VVD +GV Q+ A+ + + + +NKMD Q D + +K+I Sbjct: 6 HIRNFSIIAHIDHGKSTLADRFIQMCGGLTAREM--EAQVLDSMDLERERGITIKAHSVTLHYKAQD-----------GKTYQLNFIDTPGHVDFTYEVSRSLAACEGALLVVDAGQGVEAQSVANCYTAIEQGLEVMPVLNKMDL----PQADPDRVKDEIEKII 154
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_PROA2 (GTP-binding protein lepA OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=lepA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.952e-21 Identity = 60/143 (41.96%), Postives = 83/143 (58.04%), Query Frame = 1 Query: 97 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 525 IRN +IAH+DHGKSTL D L+ G + Q ++ D E ERGITIKS I ++++ D G Y++NLID+PGHVDFS EV+ +L +GAL+VVD +GV QT L A+ + + +NK+D Sbjct: 11 IRNFCIIAHIDHGKSTLADRLLEVTGTL-QHNQMTAQVLDDMDLERERGITIKSHAIQMHHKAGD-----------GRAYILNLIDTPGHVDFSYEVSRSLAACEGALLVVDATQGVEAQTIANLYLAVEAGLEIIPVINKID 141
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_MARMM (GTP-binding protein lepA OS=Maricaulis maris (strain MCS10) GN=lepA PE=3 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.952e-21 Identity = 60/146 (41.10%), Postives = 84/146 (57.53%), Query Frame = 1 Query: 88 PHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 525 P IRN S++AH+DHGKSTL D L+ G + Q + ++ D + E ERGITIK+ + L Y D G Y++NLID+PGHVDF+ EV +L +G+L+VVD +GV QT + QA+ V +NK+D Sbjct: 5 PSLIRNFSIVAHIDHGKSTLADRLIQVTGGLTQREMKE-QVLDNMELERERGITIKAQTVRLDYTAKD-----------GKTYVLNLIDTPGHVDFAYEVNRSLAACEGSLLVVDASQGVEAQTLANVYQAIEVNHEIVPVLNKID 138
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_LACCB (GTP-binding protein lepA OS=Lactobacillus casei (strain BL23) GN=lepA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.952e-21 Identity = 58/150 (38.67%), Postives = 87/150 (58.00%), Query Frame = 1 Query: 76 IMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 525 ++D +IRN S+IAH+DHGKSTL D ++ IA+ ++ D E ERGITIK + L+Y+ + G Y+ +LID+PGHVDFS EV+ +L +GAL+VVD +GV QT + A+ + + + +NK+D Sbjct: 6 MLDRQKHIRNFSIIAHIDHGKSTLADRILELTDTIAKRDM-QAQVLDDMALERERGITIKLNAVELHYKA-----------KNGETYIFHLIDTPGHVDFSYEVSRSLAACEGALLVVDATQGVEAQTLANVYLAIDDDLEIIPVINKVD 143 The following BLAST results are available for this feature:
BLAST of DY260199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260199 ID=DY260199; Name=DY260199; organism=Citrus clementina; type=EST; length=1029bpback to top |