DY260199

Overview
NameDY260199
Unique NameDY260199
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1029
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_BACC4 (GTP-binding protein lepA OS=Bacillus cereus (strain B4264) GN=lepA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.550e-21
Identity = 56/143 (39.16%), Postives = 83/143 (58.04%), Query Frame = 1
Query:   97 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 525
            IRN S+IAH+DHGKSTL D ++     + Q      ++ D+   E ERGITIK   + L Y+  D           G EY+++LID+PGHVDF+ EV+ +L   +GA++VVD  +G+  QT   +  AL   +  +  +NK+D
Sbjct:   13 IRNFSIIAHIDHGKSTLADRILEKTNALTQREM-KAQLLDSMDLERERGITIKLNAVQLNYKAKD-----------GEEYILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEILPVINKID 143          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_BACC3 (GTP-binding protein lepA OS=Bacillus cereus (strain 03BB102) GN=lepA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.550e-21
Identity = 56/143 (39.16%), Postives = 83/143 (58.04%), Query Frame = 1
Query:   97 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 525
            IRN S+IAH+DHGKSTL D ++     + Q      ++ D+   E ERGITIK   + L Y+  D           G EY+++LID+PGHVDF+ EV+ +L   +GA++VVD  +G+  QT   +  AL   +  +  +NK+D
Sbjct:   13 IRNFSIIAHIDHGKSTLADRILEKTNALTQREM-KAQLLDSMDLERERGITIKLNAVQLNYKAKD-----------GEEYILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEILPVINKID 143          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_BACC2 (GTP-binding protein lepA OS=Bacillus cereus (strain G9842) GN=lepA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.550e-21
Identity = 56/143 (39.16%), Postives = 83/143 (58.04%), Query Frame = 1
Query:   97 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 525
            IRN S+IAH+DHGKSTL D ++     + Q      ++ D+   E ERGITIK   + L Y+  D           G EY+++LID+PGHVDF+ EV+ +L   +GA++VVD  +G+  QT   +  AL   +  +  +NK+D
Sbjct:   13 IRNFSIIAHIDHGKSTLADRILEKTNALTQREM-KAQLLDSMDLERERGITIKLNAVQLNYKAKD-----------GEEYILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEILPVINKID 143          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_BACC1 (GTP-binding protein lepA OS=Bacillus cereus (strain ATCC 10987) GN=lepA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.550e-21
Identity = 56/143 (39.16%), Postives = 83/143 (58.04%), Query Frame = 1
Query:   97 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 525
            IRN S+IAH+DHGKSTL D ++     + Q      ++ D+   E ERGITIK   + L Y+  D           G EY+++LID+PGHVDF+ EV+ +L   +GA++VVD  +G+  QT   +  AL   +  +  +NK+D
Sbjct:   13 IRNFSIIAHIDHGKSTLADRILEKTNALTQREM-KAQLLDSMDLERERGITIKLNAVQLNYKAKD-----------GEEYILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEILPVINKID 143          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_BACC0 (GTP-binding protein lepA OS=Bacillus cereus (strain AH820) GN=lepA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.550e-21
Identity = 56/143 (39.16%), Postives = 83/143 (58.04%), Query Frame = 1
Query:   97 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 525
            IRN S+IAH+DHGKSTL D ++     + Q      ++ D+   E ERGITIK   + L Y+  D           G EY+++LID+PGHVDF+ EV+ +L   +GA++VVD  +G+  QT   +  AL   +  +  +NK+D
Sbjct:   13 IRNFSIIAHIDHGKSTLADRILEKTNALTQREM-KAQLLDSMDLERERGITIKLNAVQLNYKAKD-----------GEEYILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEILPVINKID 143          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_BACAH (GTP-binding protein lepA OS=Bacillus thuringiensis (strain Al Hakam) GN=lepA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.550e-21
Identity = 56/143 (39.16%), Postives = 83/143 (58.04%), Query Frame = 1
Query:   97 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 525
            IRN S+IAH+DHGKSTL D ++     + Q      ++ D+   E ERGITIK   + L Y+  D           G EY+++LID+PGHVDF+ EV+ +L   +GA++VVD  +G+  QT   +  AL   +  +  +NK+D
Sbjct:   13 IRNFSIIAHIDHGKSTLADRILEKTNALTQREM-KAQLLDSMDLERERGITIKLNAVQLNYKAKD-----------GEEYILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEILPVINKID 143          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_BACAC (GTP-binding protein lepA OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=lepA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.550e-21
Identity = 56/143 (39.16%), Postives = 83/143 (58.04%), Query Frame = 1
Query:   97 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 525
            IRN S+IAH+DHGKSTL D ++     + Q      ++ D+   E ERGITIK   + L Y+  D           G EY+++LID+PGHVDF+ EV+ +L   +GA++VVD  +G+  QT   +  AL   +  +  +NK+D
Sbjct:   13 IRNFSIIAHIDHGKSTLADRILEKTNALTQREM-KAQLLDSMDLERERGITIKLNAVQLNYKAKD-----------GEEYILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEILPVINKID 143          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_ANAVT (GTP-binding protein lepA OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=lepA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.550e-21
Identity = 59/143 (41.26%), Postives = 82/143 (57.34%), Query Frame = 1
Query:   97 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 525
            IRN  +IAH+DHGKSTL D L+ A G + +    + +  D    E ERGITIK     + Y+  D           G +Y++NLID+PGHVDFS EV+ +L   +GAL+VVD  +GV  QT   +  AL   +  +  +NK+D
Sbjct:    9 IRNFCIIAHIDHGKSTLADRLLQATGTVDERQMKE-QFLDNMDLERERGITIKLQAARMNYQAKD-----------GQQYVLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALEHNLEIIPVLNKID 139          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_ANASP (GTP-binding protein lepA OS=Anabaena sp. (strain PCC 7120) GN=lepA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.550e-21
Identity = 59/143 (41.26%), Postives = 82/143 (57.34%), Query Frame = 1
Query:   97 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 525
            IRN  +IAH+DHGKSTL D L+ A G + +    + +  D    E ERGITIK     + Y+  D           G +Y++NLID+PGHVDFS EV+ +L   +GAL+VVD  +GV  QT   +  AL   +  +  +NK+D
Sbjct:    9 IRNFCIIAHIDHGKSTLADRLLQATGTVDERQMKE-QFLDNMDLERERGITIKLQAARMNYQAKD-----------GQQYVLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALEHNLEIIPVLNKID 139          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_ALISL (GTP-binding protein lepA OS=Aliivibrio salmonicida (strain LFI1238) GN=lepA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.550e-21
Identity = 63/145 (43.45%), Postives = 86/145 (59.31%), Query Frame = 1
Query:   94 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIA-QEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 525
            +IRN S+IAH+DHGKSTL+D L+   G ++ +E+A  V   D+   E ERGITIK+  ++L Y   D           G  Y +N ID+PGHVDFS EV+ +L   +GAL+VVD  +GV  QT      AL   +  V  +NK+D
Sbjct:    3 HIRNFSIIAHIDHGKSTLSDRLIQVCGGLSDREMAAQV--LDSMDLERERGITIKAQSVTLNYTAND-----------GETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTALEMDLEVVPILNKID 134          
The following BLAST results are available for this feature:
BLAST of DY260199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
LEPA_BACC42.550e-2139.16GTP-binding protein lepA OS=Bacillus cereus (strai... [more]
LEPA_BACC32.550e-2139.16GTP-binding protein lepA OS=Bacillus cereus (strai... [more]
LEPA_BACC22.550e-2139.16GTP-binding protein lepA OS=Bacillus cereus (strai... [more]
LEPA_BACC12.550e-2139.16GTP-binding protein lepA OS=Bacillus cereus (strai... [more]
LEPA_BACC02.550e-2139.16GTP-binding protein lepA OS=Bacillus cereus (strai... [more]
LEPA_BACAH2.550e-2139.16GTP-binding protein lepA OS=Bacillus thuringiensis... [more]
LEPA_BACAC2.550e-2139.16GTP-binding protein lepA OS=Bacillus anthracis (st... [more]
LEPA_ANAVT2.550e-2141.26GTP-binding protein lepA OS=Anabaena variabilis (s... [more]
LEPA_ANASP2.550e-2141.26GTP-binding protein lepA OS=Anabaena sp. (strain P... [more]
LEPA_ALISL2.550e-2143.45GTP-binding protein lepA OS=Aliivibrio salmonicida... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YK14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260199 ID=DY260199; Name=DY260199; organism=Citrus clementina; type=EST; length=1029bp
AGAAATACTGTCCTTGTTGGTAATATTTGAGAATCAGTCAAGATGGTGAA
GTTCACAGCAGAAGAGCTCCGGCGTATTATGGACTTCCCACATAACATCC
GCAATATGTCTGTTATTGCCCATGTTGATCATGGGAAGTCAACCCTTACC
GACTCTCTTGTGGCTGCTGCTGGTATTATCGCCCAAGAAGTTGCTGGCGA
TGTCCGTATGACAGATACTCGTCAGGATGAAGCTGAGCGTGGTATTACAA
TCAAGTCTACTGGTATATCTCTCTACTACGAGATGACTGATGCGGCTTTG
AAGAGCTTCAAGGGAGAGCGTCAAGGGAATGAATACCTCATCAACCTTAT
TGATTCCCCTGGGCACGTCGATTTCTCATCTGAGGTTACAGCTGCCCTTC
GTATCACTGATGGTGCACTTGTGGTCGTAGACTGCATTGAAGGTGTTTGT
GTCCAAACAGAAACTGTGCTTAGACAAGCCCTGGGTGAAAGGATTAGGCC
AGTCTTGACTGTGAACAAGATGGACAGGTGCTTCCTTGAGCTTCAGGTTG
ACGGTGAAGAGGCTTACCAGACTTTCCAGAAAGTGATTGAGAATGCTAAT
GTCATTATGGCTACCTATGAAGATCCCCTCCTTGGCCATGTTCAGGTTTA
CCCTGAAAAGGGAACAGTTGCTTTCTCTGCTGGTTTGCATGGCTGGGCCT
TTACCCTGACAAATTTTGCCAAGATGTATGCCTCCCAGTTCGGAGTTGAT
GAGTCAAAGATGATGGAGAGGCCCGGGGGTGAGAACCTCCTTTGACCCCG
CCTCCAGGAATGGGACCCACCAGAACCACTGGCCCCCCCCCCTTGCAAGC
CTGGGTTTGGTCCCGTTCCCGCCAAGAAACCCCCCAAGCCAAAATCCCCC
ACCTTTTGCCTGAATGAGGGAAAAAAAAAAAACCCGGGGGCCTTAAGTTT
CCAAAAGCCTGGGTGGCCCCCGATGGAAAGTTCCCAAAGAAAAAAGAGAT
TGGAAGGGGTAAAGGGCATTTGGACGAAC
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