DY260199
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_ACICJ (GTP-binding protein lepA OS=Acidiphilium cryptum (strain JF-5) GN=lepA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.550e-21 Identity = 61/144 (42.36%), Postives = 85/144 (59.03%), Query Frame = 1 Query: 97 IRNMSVIAHVDHGKSTLTDSLVAAAGII-AQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 525 IRN S+IAH+DHGKSTL D L+ G + A+E+ V D E ERGITIK+ + L Y+ D G Y++NL+D+PGHVDF+ EV+ +L +G+L+VVD +GV QT + QA+ V +NK+D Sbjct: 9 IRNFSIIAHIDHGKSTLADRLIQTTGALSAREMTEQV--LDNMDIEKERGITIKAQTVRLNYKAKD-----------GKTYVLNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTLANVYQAIDANHEIVPVLNKID 139
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: GUF1_YEAST (GTP-binding protein GUF1 OS=Saccharomyces cerevisiae GN=GUF1 PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 2.550e-21 Identity = 58/162 (35.80%), Postives = 92/162 (56.79%), Query Frame = 1 Query: 94 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQ 579 N RN S++AHVDHGKSTL+D L+ +I A + ++ D + E ERGITIK+ S++Y K +R G YL++LID+PGHVDF EV+ + GA+++VD +G+ QT A ++ + +NK+D F +++ ++ F+ Sbjct: 45 NYRNFSIVAHVDHGKSTLSDRLLEITHVIDPN-ARNKQVLDKLEVERERGITIKAQTCSMFY----------KDKRTGKNYLLHLIDTPGHVDFRGEVSRSYASCGGAILLVDASQGIQAQTVANFYLAFSLGLKLIPVINKIDLNFTDVKQVKDQIVNNFE 195
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: TYPA_SHIFL (GTP-binding protein typA/bipA OS=Shigella flexneri GN=typA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 3.330e-21 Identity = 51/144 (35.42%), Postives = 80/144 (55.56%), Query Frame = 1 Query: 97 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDR 528 +RN+++IAHVDHGK+TL D L+ +G R+ D+ E ERGITI + ++ + N+Y IN++D+PGH DF EV + + D L+VVD +G QT V ++A ++P++ +NK+DR Sbjct: 5 LRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKW----------------NDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVINKVDR 132
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: TYPA_ECOLI (GTP-binding protein typA/BipA OS=Escherichia coli (strain K12) GN=typA PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 3.330e-21 Identity = 51/144 (35.42%), Postives = 80/144 (55.56%), Query Frame = 1 Query: 97 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDR 528 +RN+++IAHVDHGK+TL D L+ +G R+ D+ E ERGITI + ++ + N+Y IN++D+PGH DF EV + + D L+VVD +G QT V ++A ++P++ +NK+DR Sbjct: 5 LRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKW----------------NDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVINKVDR 132
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: TYPA_ECOL6 (GTP-binding protein typA/bipA OS=Escherichia coli O6 GN=typA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 3.330e-21 Identity = 51/144 (35.42%), Postives = 80/144 (55.56%), Query Frame = 1 Query: 97 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDR 528 +RN+++IAHVDHGK+TL D L+ +G R+ D+ E ERGITI + ++ + N+Y IN++D+PGH DF EV + + D L+VVD +G QT V ++A ++P++ +NK+DR Sbjct: 5 LRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKW----------------NDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVINKVDR 132
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: TYPA_ECO57 (GTP-binding protein typA/bipA OS=Escherichia coli O157:H7 GN=typA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 3.330e-21 Identity = 51/144 (35.42%), Postives = 80/144 (55.56%), Query Frame = 1 Query: 97 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDR 528 +RN+++IAHVDHGK+TL D L+ +G R+ D+ E ERGITI + ++ + N+Y IN++D+PGH DF EV + + D L+VVD +G QT V ++A ++P++ +NK+DR Sbjct: 5 LRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKW----------------NDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVINKVDR 132
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: TYPA_ECO27 (GTP-binding protein typA/bipA OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=typA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 3.330e-21 Identity = 51/144 (35.42%), Postives = 80/144 (55.56%), Query Frame = 1 Query: 97 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDR 528 +RN+++IAHVDHGK+TL D L+ +G R+ D+ E ERGITI + ++ + N+Y IN++D+PGH DF EV + + D L+VVD +G QT V ++A ++P++ +NK+DR Sbjct: 5 LRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKW----------------NDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVINKVDR 132
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_VIBVY (GTP-binding protein lepA OS=Vibrio vulnificus (strain YJ016) GN=lepA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 3.330e-21 Identity = 59/144 (40.97%), Postives = 86/144 (59.72%), Query Frame = 1 Query: 94 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 525 +IRN S+IAH+DHGKSTL+D L+ G ++ + ++ D+ + E ERGITIK+ ++L Y+ D G Y +N ID+PGHVDFS EV+ +L +GAL+VVD +GV QT A+ + V +NK+D Sbjct: 3 HIRNFSIIAHIDHGKSTLSDRLIQVCGGLSDREMAE-QVLDSMELERERGITIKAQSVTLDYKAQD-----------GETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAIEMDLEVVPILNKID 134
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_VIBVU (GTP-binding protein lepA OS=Vibrio vulnificus GN=lepA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 3.330e-21 Identity = 59/144 (40.97%), Postives = 86/144 (59.72%), Query Frame = 1 Query: 94 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 525 +IRN S+IAH+DHGKSTL+D L+ G ++ + ++ D+ + E ERGITIK+ ++L Y+ D G Y +N ID+PGHVDFS EV+ +L +GAL+VVD +GV QT A+ + V +NK+D Sbjct: 3 HIRNFSIIAHIDHGKSTLSDRLIQVCGGLSDREMAE-QVLDSMELERERGITIKAQSVTLDYKAQD-----------GETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAIEMDLEVVPILNKID 134
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: LEPA_SHELP (GTP-binding protein lepA OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=lepA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 3.330e-21 Identity = 63/145 (43.45%), Postives = 87/145 (60.00%), Query Frame = 1 Query: 94 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIA-QEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 525 +IRN S+IAH+DHGKSTL+D L+ G ++ +E+A V D+ E ERGITIK+ ++L Y+ D G Y +N ID+PGHVDFS EV+ +L +GAL+VVD +GV QT AL + V +NK+D Sbjct: 3 HIRNFSIIAHIDHGKSTLSDRLIQECGGLSDREMAAQV--LDSMDLERERGITIKAQSVTLDYKAKD-----------GETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTALDMDLDVVPVLNKID 134 The following BLAST results are available for this feature:
BLAST of DY260199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260199 ID=DY260199; Name=DY260199; organism=Citrus clementina; type=EST; length=1029bpback to top |