DY260199

Overview
NameDY260199
Unique NameDY260199
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1029
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_METAC (Elongation factor 2 OS=Methanosarcina acetivorans GN=fusA PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 5.102e-46
Identity = 101/226 (44.69%), Postives = 143/226 (63.27%), Query Frame = 1
Query:   49 KFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYE-DPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAK 723
            K   E +  +M+ P  IRN+ ++AH+DHGK+TL+D+L+A AG+I++E+AG     D+ ++E  RGITI S+ +S+ +        +F  E    +YLINLID+PGHVDF  +VT A+R  DGA+VVVD +EG   QTETVLRQAL E +RPVL VNK+DR   ELQVD +E      KVI++ N ++     +      +V    GTVAF + L+ WA ++    K
Sbjct:    5 KKMVERVTTLMNDPQRIRNIGIVAHIDHGKTTLSDNLLAGAGMISKELAGKQLFMDSDEEEQARGITIDSSNVSMVH--------TFDNE----DYLINLIDTPGHVDFGGDVTRAMRAVDGAVVVVDAVEGTMPQTETVLRQALREHVRPVLFVNKVDRLINELQVDSQEMQIRLGKVIDHVNKLIKNMNPEKFKAGWKVDAAAGTVAFGSALYNWAISVPMMKK 218          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_PICTO (Elongation factor 2 OS=Picrophilus torridus GN=fusA PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 8.703e-46
Identity = 91/213 (42.72%), Postives = 139/213 (65.26%), Query Frame = 1
Query:   73 RIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLG-HVQVYPEKGTVAFSAGLHGWAFTL 708
            ++++ P  IRN+ + AH+DHGK+TL+D+L+A AG++++++AG   + D  + E  RGITI +   S+ +E+             G EYLINLID+PGHVDF  +VT A+R  DG ++VVD +EGV  QTETV+RQAL E+++PVL +NK+DR   EL+++ EE  + F K+I + N ++  Y  P      QV  + GTVAF +  + WA ++
Sbjct:   13 KLIEIPERIRNIDIAAHIDHGKTTLSDNLIAGAGMMSEDLAGKQLLLDYDEQEQARGITINAANASMVHEV------------DGKEYLINLIDTPGHVDFGGDVTRAMRAVDGTIIVVDSVEGVMPQTETVVRQALKEKVKPVLFINKVDRLINELKLNAEEMQKRFVKIITDVNRLITKYAPPEFSKQWQVNVQAGTVAFGSAYNNWALSV 213          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_METMJ (Elongation factor 2 OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=fusA PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 8.703e-46
Identity = 97/221 (43.89%), Postives = 141/221 (63.80%), Query Frame = 1
Query:   49 KFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGH-VQVYPEKGTVAFSAGLHGWAFTL 708
            K   E +  +MD P  IRN+ ++AH+DHGK+TL+D+L+A AG+I++E+AG     D+ ++E  RGITI ++ +S+ +               G EYLIN+ID+PGHVDF  +VT A+R  DGA+VVVD +EG   QTETVLRQAL E +RPVL +NK+DR   EL+VD +E      KVI+  N ++    + +     ++   KGTVAF + L+ WA ++
Sbjct:    5 KKMVERVTELMDKPDRIRNIGIVAHIDHGKTTLSDNLLAGAGMISEELAGRQLFMDSDEEEQARGITIDASNVSMVHTYG------------GEEYLINMIDTPGHVDFGGDVTRAMRAVDGAVVVVDAVEGTMPQTETVLRQALKEGVRPVLFINKVDRLVNELKVDEQEMQIRLAKVIDKVNKLIKGMNEKMYNDGWKLDAAKGTVAFGSALYNWAVSV 213          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_METMA (Elongation factor 2 OS=Methanosarcina mazei GN=fusA PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.137e-45
Identity = 100/226 (44.25%), Postives = 143/226 (63.27%), Query Frame = 1
Query:   49 KFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYE-DPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAK 723
            K   E +  +M+ P  IRN+ ++AH+DHGK+TL+D+L+A AG+I++E+AG     D+ ++E  RGITI ++ +S+ +        +F  E    +YLINLID+PGHVDF  +VT A+R  DGA+VVVD +EG   QTETVLRQAL E +RPVL VNK+DR   ELQVD +E      KVI++ N ++     +      +V    GTVAF + L+ WA ++    K
Sbjct:    5 KKMVERVTTLMNDPQRIRNIGIVAHIDHGKTTLSDNLLAGAGMISKELAGRQLFMDSDEEEQARGITIDASNVSMVH--------TFDNE----DYLINLIDTPGHVDFGGDVTRAMRAVDGAVVVVDAVEGTMPQTETVLRQALREHVRPVLFVNKVDRLINELQVDSQEMQVRLGKVIDHVNKLIKNMNPEKFKAGWKVDAAAGTVAFGSALYNWAISVPMMKK 218          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_PYRKO (Elongation factor 2 OS=Pyrococcus kodakaraensis GN=fusA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.485e-45
Identity = 95/221 (42.99%), Postives = 140/221 (63.35%), Query Frame = 1
Query:   64 ELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDP-LLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAK 723
            +++ +M  P  IRNM + AH+DHGK+TL+D+L+A AG+I++E+AG   + D  + E  RGITI +  +S+ +              +GN+YLINLID+PGHVDF  +VT A+R  DGA++VVD +EGV  QTETVLRQAL E ++PVL +NK+DR   EL++  ++  + F KVI + N ++  Y  P       V  E G+VAF +  + WA ++    K
Sbjct:   10 KIKELMTQPERIRNMGIAAHIDHGKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHNY------------EGNDYLINLIDTPGHVDFGGDVTRAMRAIDGAIIVVDAVEGVMPQTETVLRQALREYVKPVLFINKVDRLIKELKLTPQQMQERFVKVITDVNRLIRRYAPPEFKDKWLVKVEDGSVAFGSAYYNWALSVPYMKK 218          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_METBF (Elongation factor 2 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=fusA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.485e-45
Identity = 99/226 (43.81%), Postives = 142/226 (62.83%), Query Frame = 1
Query:   49 KFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYE-DPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAK 723
            K   E +  +M+ P  IRN+ ++AH+DHGK+TL+D+L+A AG+I++E+AG     D+ ++E ERGITI S+ +S+ +   +             +YLINLID+PGHVDF  +VT A+R  DGA+VVVD +EG   QTETVLRQAL E +RPVL VNK+DR   EL+VD +E      KVI++ N ++     +      +V    GTVAF + L+ WA ++    K
Sbjct:    5 KKMVERVTMLMNEPTKIRNIGIVAHIDHGKTTLSDNLLAGAGMISKELAGRQLFMDSDEEEQERGITIDSSNVSMVHNFDN------------EDYLINLIDTPGHVDFGGDVTRAMRAVDGAVVVVDAVEGTMPQTETVLRQALREHVRPVLFVNKVDRLINELKVDSQEMQIRLGKVIDHVNKLIKNMNPEKYKEGWRVDAAAGTVAFGSALYNWAISVPMMKK 218          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_SULSO (Elongation factor 2 OS=Sulfolobus solfataricus GN=fusA PE=1 SV=3)

HSP 1 Score: 182.57 bits (462), Expect = 3.307e-45
Identity = 99/246 (40.24%), Postives = 146/246 (59.35%), Query Frame = 1
Query:   55 TAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGHV-QVYPEKGTVAFSAGLHGWAFTL-------TNFAKMYASQFGVDESKMME 768
            T E++  +M     +RN+ +IAHVDHGK+T +D+L+AA+GII+ +VAG+    D    E +RGIT+K+  ISLY+E             +G  Y+INLID+PGHVDFS  VT +LR+ DG++VVVD +EG+  QTETVLRQ+L ER+RP+L +NK+DR   EL++  +E       +I   N ++  Y +P       + P+ G V F +    W F+L        N   +  +    D+SK+ E
Sbjct:    6 TVEQVLSLMKDRTRVRNIGIIAHVDHGKTTTSDTLLAASGIISPKVAGEALALDYLNVEQQRGITVKAANISLYHEA------------EGKGYVINLIDTPGHVDFSGRVTRSLRVLDGSIVVVDAVEGIMTQTETVLRQSLEERVRPILFINKVDRLVKELKLSPQEMLNRLLDIIRQVNNLIDMYGEPEFKEKWMINPQAGNVIFGSAKDKWGFSLPMAQKKGINMKNVIDAYTASDKSKLEE 239          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_SULIY (Elongation factor 2 OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 3.307e-45
Identity = 99/246 (40.24%), Postives = 146/246 (59.35%), Query Frame = 1
Query:   55 TAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGHV-QVYPEKGTVAFSAGLHGWAFTL-------TNFAKMYASQFGVDESKMME 768
            T E++  +M     +RN+ +IAHVDHGK+T +D+L+AA+GII+ +VAG+    D    E +RGIT+K+  ISLY+E             +G  Y+INLID+PGHVDFS  VT +LR+ DG++VVVD +EG+  QTETVLRQ+L ER+RP+L +NK+DR   EL++  +E       +I   N ++  Y +P       + P+ G V F +    W F+L        N   +  +    D+SK+ E
Sbjct:    6 TVEQVLSLMKDRTRVRNIGIIAHVDHGKTTTSDTLLAASGIISPKVAGEALALDYLSVEQQRGITVKAANISLYHEA------------EGKGYVINLIDTPGHVDFSGRVTRSLRVLDGSIVVVDAVEGIMTQTETVLRQSLEERVRPILFINKVDRLVKELKLSPQEMLNRLLDIIRQVNNLIDMYGEPEFKEKWMINPQAGNVIFGSAKDKWGFSLPMAQKKGINMKNVIDAYTASDKSKLEE 239          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_SULIN (Elongation factor 2 OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=fusA PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 3.307e-45
Identity = 99/246 (40.24%), Postives = 146/246 (59.35%), Query Frame = 1
Query:   55 TAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGHV-QVYPEKGTVAFSAGLHGWAFTL-------TNFAKMYASQFGVDESKMME 768
            T E++  +M     +RN+ +IAHVDHGK+T +D+L+AA+GII+ +VAG+    D    E +RGIT+K+  ISLY+E             +G  Y+INLID+PGHVDFS  VT +LR+ DG++VVVD +EG+  QTETVLRQ+L ER+RP+L +NK+DR   EL++  +E       +I   N ++  Y +P       + P+ G V F +    W F+L        N   +  +    D+SK+ E
Sbjct:    6 TVEQVLSLMKDRTRVRNIGIIAHVDHGKTTTSDTLLAASGIISPKVAGEALALDYLSVEQQRGITVKAANISLYHEA------------EGKGYVINLIDTPGHVDFSGRVTRSLRVLDGSIVVVDAVEGIMTQTETVLRQSLEERVRPILFINKVDRLVKELKLSPQEMLNRLLDIIRQVNNLIDMYGEPEFKEKWMINPQAGNVIFGSAKDKWGFSLPMAQKKGINMKNVIDAYTASDKSKLEE 239          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_SULIM (Elongation factor 2 OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 3.307e-45
Identity = 99/246 (40.24%), Postives = 146/246 (59.35%), Query Frame = 1
Query:   55 TAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGHV-QVYPEKGTVAFSAGLHGWAFTL-------TNFAKMYASQFGVDESKMME 768
            T E++  +M     +RN+ +IAHVDHGK+T +D+L+AA+GII+ +VAG+    D    E +RGIT+K+  ISLY+E             +G  Y+INLID+PGHVDFS  VT +LR+ DG++VVVD +EG+  QTETVLRQ+L ER+RP+L +NK+DR   EL++  +E       +I   N ++  Y +P       + P+ G V F +    W F+L        N   +  +    D+SK+ E
Sbjct:    6 TVEQVLSLMKDRTRVRNIGIIAHVDHGKTTTSDTLLAASGIISPKVAGEALALDYLSVEQQRGITVKAANISLYHEA------------EGKGYVINLIDTPGHVDFSGRVTRSLRVLDGSIVVVDAVEGIMTQTETVLRQSLEERVRPILFINKVDRLVKELKLSPQEMLNRLLDIIRQVNNLIDMYGEPEFKEKWMINPQAGNVIFGSAKDKWGFSLPMAQKKGINMKNVIDAYTASDKSKLEE 239          
The following BLAST results are available for this feature:
BLAST of DY260199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF2_METAC5.102e-4644.69Elongation factor 2 OS=Methanosarcina acetivorans ... [more]
EF2_PICTO8.703e-4642.72Elongation factor 2 OS=Picrophilus torridus GN=fus... [more]
EF2_METMJ8.703e-4643.89Elongation factor 2 OS=Methanoculleus marisnigri (... [more]
EF2_METMA1.137e-4544.25Elongation factor 2 OS=Methanosarcina mazei GN=fus... [more]
EF2_PYRKO1.485e-4542.99Elongation factor 2 OS=Pyrococcus kodakaraensis GN... [more]
EF2_METBF1.485e-4543.81Elongation factor 2 OS=Methanosarcina barkeri (str... [more]
EF2_SULSO3.307e-4540.24Elongation factor 2 OS=Sulfolobus solfataricus GN=... [more]
EF2_SULIY3.307e-4540.24Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIN3.307e-4540.24Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIM3.307e-4540.24Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YK14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260199 ID=DY260199; Name=DY260199; organism=Citrus clementina; type=EST; length=1029bp
AGAAATACTGTCCTTGTTGGTAATATTTGAGAATCAGTCAAGATGGTGAA
GTTCACAGCAGAAGAGCTCCGGCGTATTATGGACTTCCCACATAACATCC
GCAATATGTCTGTTATTGCCCATGTTGATCATGGGAAGTCAACCCTTACC
GACTCTCTTGTGGCTGCTGCTGGTATTATCGCCCAAGAAGTTGCTGGCGA
TGTCCGTATGACAGATACTCGTCAGGATGAAGCTGAGCGTGGTATTACAA
TCAAGTCTACTGGTATATCTCTCTACTACGAGATGACTGATGCGGCTTTG
AAGAGCTTCAAGGGAGAGCGTCAAGGGAATGAATACCTCATCAACCTTAT
TGATTCCCCTGGGCACGTCGATTTCTCATCTGAGGTTACAGCTGCCCTTC
GTATCACTGATGGTGCACTTGTGGTCGTAGACTGCATTGAAGGTGTTTGT
GTCCAAACAGAAACTGTGCTTAGACAAGCCCTGGGTGAAAGGATTAGGCC
AGTCTTGACTGTGAACAAGATGGACAGGTGCTTCCTTGAGCTTCAGGTTG
ACGGTGAAGAGGCTTACCAGACTTTCCAGAAAGTGATTGAGAATGCTAAT
GTCATTATGGCTACCTATGAAGATCCCCTCCTTGGCCATGTTCAGGTTTA
CCCTGAAAAGGGAACAGTTGCTTTCTCTGCTGGTTTGCATGGCTGGGCCT
TTACCCTGACAAATTTTGCCAAGATGTATGCCTCCCAGTTCGGAGTTGAT
GAGTCAAAGATGATGGAGAGGCCCGGGGGTGAGAACCTCCTTTGACCCCG
CCTCCAGGAATGGGACCCACCAGAACCACTGGCCCCCCCCCCTTGCAAGC
CTGGGTTTGGTCCCGTTCCCGCCAAGAAACCCCCCAAGCCAAAATCCCCC
ACCTTTTGCCTGAATGAGGGAAAAAAAAAAAACCCGGGGGCCTTAAGTTT
CCAAAAGCCTGGGTGGCCCCCGATGGAAAGTTCCCAAAGAAAAAAGAGAT
TGGAAGGGGTAAAGGGCATTTGGACGAAC
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