DY260199

Overview
NameDY260199
Unique NameDY260199
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1029
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_ARCFU (Elongation factor 2 OS=Archaeoglobus fulgidus GN=fusA PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.800e-44
Identity = 91/221 (41.18%), Postives = 138/221 (62.44%), Query Frame = 1
Query:   61 EELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAK 723
            ++++ +M  P  IRN+ ++AH+DHGK+TL+D+L+A AG+I++E+AG     D  + E ERGITI +  +S+ +E             +G +YLINLID+PGHVDF  +VT A+R  DG +VVVD +EGV  QTETVLRQAL E ++PVL VNK+DR   EL++  ++  +   KVI   N ++           ++    G+ AF + L+ WA ++ +  K
Sbjct:    8 DKIKELMWKPKFIRNIGIVAHIDHGKTTLSDNLLAGAGMISEELAGQQLYLDFDEQEQERGITINAANVSMVHEY------------EGQDYLINLIDTPGHVDFGGDVTRAMRAVDGVIVVVDAVEGVMPQTETVLRQALKENVKPVLFVNKVDRLIKELELTPQQMQERLIKVITEVNKLIKAMRPDKYSEWKIDVANGSAAFGSALYNWAVSVPSQKK 216          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_DESK1 (Elongation factor 2 OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=fusA PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 3.656e-44
Identity = 98/224 (43.75%), Postives = 137/224 (61.16%), Query Frame = 1
Query:   43 MVKFT-AEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGHVQVY-PEKGTVAFSAGLHGWAFTL 708
            MVKF    E+ +IM     IRN+ + AHVDHGK+TL+D+L++AAG+I++++AG     D    E +R +T+K+   SLY+E             +G  YLINLID+PGHVDF S+   ALR+ DGA+VVVD +EGV  QTE  LR AL ER+RPVL +NK+DR   EL++   E  Q   +++ + N ++ATY D       +  P KG VAF +    W  T+
Sbjct:    1 MVKFKQTSEVLKIMGNIEQIRNIGITAHVDHGKTTLSDTLLSAAGLISEKIAGQALALDYLDVEQKRQMTVKAANASLYHEY------------KGKPYLINLIDTPGHVDFQSKTIRALRVIDGAIVVVDAVEGVMTQTEMYLRVALEERVRPVLFINKIDRLIKELRLSPTEIQQRLVQIVRDVNTLIATYADKEFQKAWLLDPMKGQVAFGSARDRWGLTI 212          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_THEAC (Elongation factor 2 OS=Thermoplasma acidophilum GN=fusA PE=3 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 4.776e-44
Identity = 94/222 (42.34%), Postives = 141/222 (63.51%), Query Frame = 1
Query:   61 EELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY-EDPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAK 723
            E+  +I++    IRN+ ++AH+DHGK+TL+D+L+A AG++++E+AG   + D  + E  RGITI            +AA+ S     QG EYLINLID+PGHVDF  +VT A+R  DG +VVVD +EGV  QTETV+RQAL E ++PVL +NK+DR   EL+++ +E  + F K+I + N +++ Y         QV  + G VAF +  + WA ++   A+
Sbjct:    9 EKALKIVEHTELIRNIGIVAHIDHGKTTLSDNLIAGAGMMSEELAGKQLVLDYDEQEQARGITI------------NAAVASMVHTFQGKEYLINLIDTPGHVDFGGDVTRAMRAVDGVIVVVDSVEGVMPQTETVIRQALREHVKPVLFINKIDRLINELRLNSDEMQKRFTKIITDVNRLISKYAPQQFTKEWQVSVQDGRVAFGSAYNNWAISIPAMAE 218          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_META3 (Elongation factor 2 OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=fusA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.776e-44
Identity = 95/222 (42.79%), Postives = 140/222 (63.06%), Query Frame = 1
Query:   61 EELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENAN-VIMATYEDPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAK 723
            E++  +M+    IRN+ + AH+DHGK+TL+D+L+A AG+I++++AGD    D  ++EAERGITI +  +S+ +E             QG  +LINLID+PGHVDF  +VT A+R  DGA+VVV  +EG+  QTETVLRQAL E+++P+L +NK+DR   EL++  EE    F K+I + N +I     +   G   V    G+VAF +  H WA ++    K
Sbjct:    9 EQVVSLMETHDQIRNIGICAHIDHGKTTLSDNLLAGAGMISKDLAGDQLALDFDEEEAERGITIYAANVSMVHEC------------QGKPHLINLIDTPGHVDFGGDVTRAMRAIDGAVVVVCAVEGIMPQTETVLRQALKEKVKPILFINKVDRLLNELKLTPEELQNRFMKIIADVNKLIEKMSPEEFKGKWVVNVMDGSVAFGSAYHNWAISVPYMQK 218          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_METJA (Elongation factor 2 OS=Methanocaldococcus jannaschii GN=fusA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 8.146e-44
Identity = 95/216 (43.98%), Postives = 140/216 (64.81%), Query Frame = 1
Query:   64 ELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENA-NVIMATYEDPLLGHVQVYPEKGTVAFSAGLHGWAFTL 708
            +++ +M+    IRN+ + AH+DHGK+TL+D+L+A AG+I++E+AG+    D  ++EA+RGITI +  +S+ +              +GNEYLINLID+PGHVDF  +VT A+R  DGA+VVV  +EGV  QTETVLRQAL ER++PVL +NK+DR   EL++  EE    F K+I +  N+I     +       V  E G+VAF +  + WA ++
Sbjct:   10 KIKELMEKYDRIRNIGICAHIDHGKTTLSDNLLAGAGMISKELAGEQLALDFDEEEAQRGITIFAANVSMVHTY------------EGNEYLINLIDTPGHVDFGGDVTRAMRAIDGAIVVVCAVEGVMPQTETVLRQALRERVKPVLFINKVDRLINELKLTPEELQSRFIKIINDINNLIRKMAPEEFKDKWLVRVEDGSVAFGSAYNNWAISV 213          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_THESM (Elongation factor 2 OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=fusA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.815e-43
Identity = 92/222 (41.44%), Postives = 139/222 (62.61%), Query Frame = 1
Query:   61 EELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYED-PLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAK 723
            +E++ +M  P  IRNM + AH+DHGK+TL+D+L+A AG+I++E+AG   + D  + E  RGITI +  +S+ +E  D             +YL+NLID+PGHVDF  +VT A+R  DGA++VVD +EGV  QTETVLRQAL E ++PVL +NK+DR   EL+++ ++  + F +VI + N ++  Y          V    G+VAF +  + WA ++    K
Sbjct:    9 KEIKELMLQPERIRNMGIAAHIDHGKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMIHEYGD------------QKYLVNLIDTPGHVDFGGDVTRAMRAIDGAIIVVDAVEGVMPQTETVLRQALREYVKPVLFINKVDRLIKELKLNPQQMQERFVRVITDVNRLIRKYAPAEFKNKWLVNVNDGSVAFGSAYYNWALSVPYMKK 218          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_PYRAR (Elongation factor 2 OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=fusA PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 9.006e-43
Identity = 94/226 (41.59%), Postives = 135/226 (59.73%), Query Frame = 1
Query:   34 SVKMVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDP-LLGHVQVYPEKGTVAFSAGLHGWAFTL 708
            +V++V+   +E+  I   P  IRN   +AHVDHGK+T TDSL+  AG+++ +VAG     D    E  R +T+K+  ISLY+E              G  YL+N +D+PGHVDF+  VT +LR+ DG LVVVD +EGV  QTETV+RQAL E +RPVL +NK+DR   EL++  +E  Q    ++++ N ++  +  P      +V P KG VA  + LH W  T+
Sbjct:    4 AVRIVEKQLDEILAIARNPAQIRNAGTLAHVDHGKTTTTDSLLMGAGLLSPKVAGKALAMDFVAIEQLRQMTVKAANISLYFEYG------------GKPYLVNFVDTPGHVDFTGHVTRSLRVMDGGLVVVDSVEGVMTQTETVVRQALEEYVRPVLFINKIDRLIKELRLSPQEIQQRILTIVKDFNALIDMFAPPEFKDKWKVDPAKGQVALGSALHKWGITI 217          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_PYRAB (Elongation factor 2 OS=Pyrococcus abyssi GN=fusA PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.176e-42
Identity = 88/216 (40.74%), Postives = 137/216 (63.43%), Query Frame = 1
Query:   64 ELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY-EDPLLGHVQVYPEKGTVAFSAGLHGWAFTL 708
            +++ +M  P  IRN+ + AH+DHGK+TL+D+L+A AG+I++E+AG   + D  + E  RGITI +  +S+ +              +G +YLINLID+PGHVDF  +VT A+R  DG ++VVD +EGV  QTETV+RQAL E ++PVL +NK+DR   EL++  ++  + F K+I + N ++  Y  +       V  E G+VAF +  + WA ++
Sbjct:   10 KIKELMLQPERIRNIGIAAHIDHGKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHNY------------EGKDYLINLIDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVKPVLFINKVDRLIRELKLTPQQMMERFSKIIMDVNRLIQRYAPEEYKKQWMVKVEDGSVAFGSAYYNWALSV 213          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_PYRWO (Elongation factor 2 OS=Pyrococcus woesei GN=fusA PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.536e-42
Identity = 88/216 (40.74%), Postives = 137/216 (63.43%), Query Frame = 1
Query:   64 ELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY-EDPLLGHVQVYPEKGTVAFSAGLHGWAFTL 708
            +++ +M  P  IRN+ + AH+DHGK+TL+D+L+A AG+I++E+AG   + D  + E  RGITI +  +S+ +              +G +YLINLID+PGHVDF  +VT A+R  DG ++VVD +EGV  QTETV+RQAL E ++PVL +NK+DR   EL++  ++  + F K+I + N ++  Y  +       V  E G+VAF +  + WA ++
Sbjct:   10 KIKELMLQPERIRNIGIAAHIDHGKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHNY------------EGKDYLINLIDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVKPVLFINKVDRLIRELKLTPQQMMERFSKIIMDVNRLIQRYAPEEYKKKWMVRVEDGSVAFGSAYYNWALSV 213          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_PYRIL (Elongation factor 2 OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=fusA PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.536e-42
Identity = 93/226 (41.15%), Postives = 135/226 (59.73%), Query Frame = 1
Query:   34 SVKMVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDP-LLGHVQVYPEKGTVAFSAGLHGWAFTL 708
            +V++V+   +E+  I   P  IRN   +AHVDHGK+T TDSL+  AG+++ +VAG     D    E  R +T+K+  ISLY+E              G  YLIN +D+PGHVDF+  VT +LR+ DG LVVVD +EGV  QTETV+RQAL E +RPVL +NK+DR   EL++  +E  Q    ++++ N ++  +  P      ++ P KG +A  + LH W  T+
Sbjct:    4 AVRIVEKQLDEILAIARNPAQIRNAGTLAHVDHGKTTTTDSLLMGAGLLSPKVAGKALAMDYVPIEQLRQMTVKAANISLYFEYG------------GKPYLINFVDTPGHVDFTGHVTRSLRVMDGGLVVVDAVEGVMTQTETVVRQALEEYVRPVLFINKIDRLIKELRLSPQEIQQRILTIVKDFNALIEMFAPPEFKDKWKIDPGKGQMAMGSALHKWGITI 217          
The following BLAST results are available for this feature:
BLAST of DY260199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF2_ARCFU2.800e-4441.18Elongation factor 2 OS=Archaeoglobus fulgidus GN=f... [more]
EF2_DESK13.656e-4443.75Elongation factor 2 OS=Desulfurococcus kamchatkens... [more]
EF2_THEAC4.776e-4442.34Elongation factor 2 OS=Thermoplasma acidophilum GN... [more]
EF2_META34.776e-4442.79Elongation factor 2 OS=Methanococcus aeolicus (str... [more]
EF2_METJA8.146e-4443.98Elongation factor 2 OS=Methanocaldococcus jannasch... [more]
EF2_THESM1.815e-4341.44Elongation factor 2 OS=Thermococcus sibiricus (str... [more]
EF2_PYRAR9.006e-4341.59Elongation factor 2 OS=Pyrobaculum arsenaticum (st... [more]
EF2_PYRAB1.176e-4240.74Elongation factor 2 OS=Pyrococcus abyssi GN=fusA P... [more]
EF2_PYRWO1.536e-4240.74Elongation factor 2 OS=Pyrococcus woesei GN=fusA P... [more]
EF2_PYRIL1.536e-4241.15Elongation factor 2 OS=Pyrobaculum islandicum (str... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YK14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260199 ID=DY260199; Name=DY260199; organism=Citrus clementina; type=EST; length=1029bp
AGAAATACTGTCCTTGTTGGTAATATTTGAGAATCAGTCAAGATGGTGAA
GTTCACAGCAGAAGAGCTCCGGCGTATTATGGACTTCCCACATAACATCC
GCAATATGTCTGTTATTGCCCATGTTGATCATGGGAAGTCAACCCTTACC
GACTCTCTTGTGGCTGCTGCTGGTATTATCGCCCAAGAAGTTGCTGGCGA
TGTCCGTATGACAGATACTCGTCAGGATGAAGCTGAGCGTGGTATTACAA
TCAAGTCTACTGGTATATCTCTCTACTACGAGATGACTGATGCGGCTTTG
AAGAGCTTCAAGGGAGAGCGTCAAGGGAATGAATACCTCATCAACCTTAT
TGATTCCCCTGGGCACGTCGATTTCTCATCTGAGGTTACAGCTGCCCTTC
GTATCACTGATGGTGCACTTGTGGTCGTAGACTGCATTGAAGGTGTTTGT
GTCCAAACAGAAACTGTGCTTAGACAAGCCCTGGGTGAAAGGATTAGGCC
AGTCTTGACTGTGAACAAGATGGACAGGTGCTTCCTTGAGCTTCAGGTTG
ACGGTGAAGAGGCTTACCAGACTTTCCAGAAAGTGATTGAGAATGCTAAT
GTCATTATGGCTACCTATGAAGATCCCCTCCTTGGCCATGTTCAGGTTTA
CCCTGAAAAGGGAACAGTTGCTTTCTCTGCTGGTTTGCATGGCTGGGCCT
TTACCCTGACAAATTTTGCCAAGATGTATGCCTCCCAGTTCGGAGTTGAT
GAGTCAAAGATGATGGAGAGGCCCGGGGGTGAGAACCTCCTTTGACCCCG
CCTCCAGGAATGGGACCCACCAGAACCACTGGCCCCCCCCCCTTGCAAGC
CTGGGTTTGGTCCCGTTCCCGCCAAGAAACCCCCCAAGCCAAAATCCCCC
ACCTTTTGCCTGAATGAGGGAAAAAAAAAAAACCCGGGGGCCTTAAGTTT
CCAAAAGCCTGGGTGGCCCCCGATGGAAAGTTCCCAAAGAAAAAAGAGAT
TGGAAGGGGTAAAGGGCATTTGGACGAAC
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