DY260199

Overview
NameDY260199
Unique NameDY260199
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1029
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_PYRHO (Elongation factor 2 OS=Pyrococcus horikoshii GN=fusA PE=3 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 1.536e-42
Identity = 88/216 (40.74%), Postives = 137/216 (63.43%), Query Frame = 1
Query:   64 ELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY-EDPLLGHVQVYPEKGTVAFSAGLHGWAFTL 708
            +++ +M  P  IRN+ + AH+DHGK+TL+D+L+A AG+I++E+AG   + D  + E  RGITI +  +S+ +              +G +YLINLID+PGHVDF  +VT A+R  DG ++VVD +EGV  QTETV+RQAL E ++PVL +NK+DR   EL++  ++  + F K+I + N ++  Y  +       V  E G+VAF +  + WA ++
Sbjct:   10 KIKELMLQPERIRNIGIAAHIDHGKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHNY------------EGKDYLINLIDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVKPVLFINKVDRLIRELKLTPQQMMERFSKIIMDVNRLIQRYAPEEYKKKWMVKVEDGSVAFGSAYYNWALSV 213          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_PYRFU (Elongation factor 2 OS=Pyrococcus furiosus GN=fusA PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.536e-42
Identity = 88/216 (40.74%), Postives = 137/216 (63.43%), Query Frame = 1
Query:   64 ELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY-EDPLLGHVQVYPEKGTVAFSAGLHGWAFTL 708
            +++ +M  P  IRN+ + AH+DHGK+TL+D+L+A AG+I++E+AG   + D  + E  RGITI +  +S+ +              +G +YLINLID+PGHVDF  +VT A+R  DG ++VVD +EGV  QTETV+RQAL E ++PVL +NK+DR   EL++  ++  + F K+I + N ++  Y  +       V  E G+VAF +  + WA ++
Sbjct:   10 KIKELMLQPERIRNIGIAAHIDHGKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHNY------------EGKDYLINLIDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVKPVLFINKVDRLIRELKLTPQQMMERFSKIIMDVNRLIQRYAPEEYKKKWMVRVEDGSVAFGSAYYNWALSV 213          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_PYRCJ (Elongation factor 2 OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=fusA PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.536e-42
Identity = 93/226 (41.15%), Postives = 135/226 (59.73%), Query Frame = 1
Query:   34 SVKMVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDP-LLGHVQVYPEKGTVAFSAGLHGWAFTL 708
            +V++V+   +E+  I   P  IRN   +AHVDHGK+T TDSL+  AG+++ +VAG     D    E  R +T+K+  ISLY+E              G  YLIN +D+PGHVDF+  VT +LR+ DG LVVVD +EGV  QTETV+RQAL E +RPVL +NK+DR   EL++  +E  Q    ++++ N ++  +  P      ++ P KG +A  + LH W  T+
Sbjct:    4 AVRIVEKQLDEILAIARNPAQIRNAGTLAHVDHGKTTTTDSLLMGAGLLSPKVAGKALAMDYVPIEQLRQMTVKAANISLYFEYG------------GKPYLINFVDTPGHVDFTGHVTRSLRVMDGGLVVVDAVEGVMTQTETVVRQALEEYVRPVLFINKIDRLIKELRLSPQEIQQRILSIVKDFNALIDMFAPPEFKDKWKIDPGKGQMAMGSALHKWGITI 217          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_METMP (Elongation factor 2 OS=Methanococcus maripaludis GN=fusA PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.536e-42
Identity = 97/219 (44.29%), Postives = 137/219 (62.56%), Query Frame = 1
Query:   61 EELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVI---MATYEDPLLGHVQVYPEKGTVAFSAGLHGWAFTL 708
            E+++ +M+    IRNM + AH+DHGK+TL+D+L+A AG+I++E+AGD    D  ++EA RGITI +  +S+ +E +            G EYLINLID+PGHVDF  +VT A+R  DGA+VV   +EGV  QTETVLRQAL E+++PVL +NK+DR   EL++  EE    F K+I   N +   MA  E        V    G VAF +  + WA ++
Sbjct:    9 EKVKTLMETHEQIRNMGICAHIDHGKTTLSDNLLAGAGMISKELAGDQLALDFDEEEAARGITIYAANVSMVHEYS------------GKEYLINLIDTPGHVDFGGDVTRAMRAIDGAVVVCCAVEGVMPQTETVLRQALKEKVKPVLFINKVDRLINELKLTPEELQGRFMKIIAEVNKLIEKMAPEEFKKEWLCDV--ANGKVAFGSAYNNWAISV 213          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_METS3 (Elongation factor 2 OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=fusA PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 2.006e-42
Identity = 93/217 (42.86%), Postives = 136/217 (62.67%), Query Frame = 1
Query:   64 ELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY--EDPLLGHVQVYPEKGTVAFSAGLHGWAFTL 708
            +++ +M  P +IRN+ + AH+DHGK+TL+D+L+A AG+I++E+AGD R  D  + E  RGITI +  +S+ +   D             EYLINLID+PGHVDF  +VT A+R  DGA+VVV  +EG+  QTETVLRQAL E ++PVL +NK+DR   EL+++ EE  + F  +   AN ++     ED        + + G+VAF +  H WA  +
Sbjct:   10 KIKDLMYKPDSIRNIGICAHIDHGKTTLSDNLLAGAGMISEELAGDQRFLDFDEQEQARGITIDAANVSMVHNYKD------------EEYLINLIDTPGHVDFGGDVTRAMRAVDGAVVVVCAVEGIMPQTETVLRQALKENVKPVLFINKVDRLINELKLEPEELQKRFINIYMEANKLIKNMAPEDKKEEWAVDFTD-GSVAFGSAYHNWAINV 213          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_METM5 (Elongation factor 2 OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=fusA PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 3.422e-42
Identity = 97/219 (44.29%), Postives = 136/219 (62.10%), Query Frame = 1
Query:   61 EELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVI---MATYEDPLLGHVQVYPEKGTVAFSAGLHGWAFTL 708
            E+++ +M+    IRNM + AH+DHGK+TL+D+L+A AG+I++E+AGD    D  ++EA RGITI +  +S+ +E              G EYLINLID+PGHVDF  +VT A+R  DGA+VV   +EGV  QTETVLRQAL E+++PVL +NK+DR   EL++  EE    F K+I   N +   MA  E        V    G VAF +  + WA ++
Sbjct:    9 EKVKTLMETHDQIRNMGICAHIDHGKTTLSDNLLAGAGMISKELAGDQLALDFDEEEAARGITIYAANVSMVHEYG------------GKEYLINLIDTPGHVDFGGDVTRAMRAIDGAVVVCCAVEGVMPQTETVLRQALKEKVKPVLFINKVDRLINELKLTPEELQGRFMKIIAEVNKLIEKMAPEEFKTEWLCDV--ANGKVAFGSAYNNWAISV 213          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_THENV (Elongation factor 2 OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=fusA PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 4.470e-42
Identity = 93/226 (41.15%), Postives = 135/226 (59.73%), Query Frame = 1
Query:   34 SVKMVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDP-LLGHVQVYPEKGTVAFSAGLHGWAFTL 708
            +V++V+   +E+  I   P  IRN   +AHVDHGK+T +DSL+  AG+++ +VAG     D    E  R +T+K+  ISLY+E              G  YLIN +D+PGHVDF+  VT +LR+ DG LVVVD +EGV  QTETV+RQAL E +RPVL +NK+DR   EL++  +E  Q    ++++ N ++  +  P      +V P KG +A  + LH W  T+
Sbjct:    4 AVRVVEKQLDEILAIARNPAQIRNAGTLAHVDHGKTTTSDSLLMGAGLLSPKVAGKALAMDYVPIEQLRQMTVKAANISLYFEYG------------GKPYLINFVDTPGHVDFTGHVTRSLRVMDGGLVVVDAVEGVMTQTETVVRQALEEYVRPVLFINKIDRLIKELRLSPQEIQQRILTIVKDFNALIDMFAPPEFKDKWKVDPGKGQMAMGSALHKWGITI 217          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_PYRAE (Elongation factor 2 OS=Pyrobaculum aerophilum GN=fusA PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 4.470e-42
Identity = 92/226 (40.71%), Postives = 135/226 (59.73%), Query Frame = 1
Query:   34 SVKMVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDP-LLGHVQVYPEKGTVAFSAGLHGWAFTL 708
            +V++V+   +E+  I   P  IRN   +AHVDHGK+T +DSL+  AG+++ +VAG     D    E  R +T+K+  ISLY+E              G  YLIN +D+PGHVDF+  VT +LR+ DG LVVVD +EGV  QTETV+RQAL E +RPVL +NK+DR   EL++  +E  Q    ++++ N ++  +  P      ++ P KG +A  + LH W  T+
Sbjct:    4 AVRIVEKQLDEILAIAKNPAQIRNAGTLAHVDHGKTTTSDSLLMGAGLLSPKVAGKALAMDYVPIEQLRQMTVKAANISLYFEYG------------GKPYLINFVDTPGHVDFTGHVTRSLRVMDGGLVVVDAVEGVMTQTETVVRQALEEYVRPVLFINKIDRLIKELRLSPQEIQQRILTIVKDFNALIDMFAPPEFKDKWKIDPGKGQMALGSALHKWGITI 217          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_METM6 (Elongation factor 2 OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=fusA PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 4.470e-42
Identity = 99/222 (44.59%), Postives = 138/222 (62.16%), Query Frame = 1
Query:   61 EELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVI---MATYE---DPLLGHVQVYPEKGTVAFSAGLHGWAFTL 708
            E+++ +M+    IRNM + AH+DHGK+TL+D+L+A AG+I++E+AGD    D  ++EA RGITI +  +S+ +E              G EYLINLID+PGHVDF  +VT A+R  DGA+VV   +EGV  QTETVLRQAL E+++PVL +NK+DR   EL++  EE    F K+I   N +   MA  E   D L   V      G VAF +  + WA ++
Sbjct:    9 EKVKTLMEKHDQIRNMGICAHIDHGKTTLSDNLLAGAGMISKELAGDQLALDFDEEEAARGITIYAANVSMVHEYN------------GKEYLINLIDTPGHVDFGGDVTRAMRAIDGAVVVCCAVEGVMPQTETVLRQALKEKVKPVLFINKVDRLINELKLTPEELQGRFMKIIAEVNKLIEKMAPEEFKKDWLCDVV-----TGKVAFGSAYNNWAISV 213          
BLAST of DY260199 vs. ExPASy Swiss-Prot
Match: EF2_METVS (Elongation factor 2 OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=fusA PE=3 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 5.838e-42
Identity = 97/224 (43.30%), Postives = 137/224 (61.16%), Query Frame = 1
Query:   61 EELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVI---MATYEDPLLGHVQVYPEKGTVAFSAGLHGWAFTLTNFAK 723
            E+++ +M+    IRNM + AH+DHGK+TL+D+L+A AG+I++++AGD    D  ++EA RGITI +  +S+ +E              G EYLINLID+PGHVDF  +VT A+R  DGA+VV   +EGV  QTETVLRQAL E+++PVL +NK+DR   EL++  EE    F K+I   N +   MA  E        V    G VAF +  + WA ++    K
Sbjct:    9 EKVKSLMETHDQIRNMGICAHIDHGKTTLSDNLLAGAGMISKDLAGDQLALDFDEEEAARGITIYAANVSMVHEYN------------GKEYLINLIDTPGHVDFGGDVTRAMRAIDGAVVVCCAVEGVMPQTETVLRQALKEKVKPVLFINKVDRLINELKLTPEELQGRFMKIIAEVNKLIEKMAPEEFKKEWLCDVV--TGKVAFGSAYNNWAISVPYMQK 218          
The following BLAST results are available for this feature:
BLAST of DY260199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF2_PYRHO1.536e-4240.74Elongation factor 2 OS=Pyrococcus horikoshii GN=fu... [more]
EF2_PYRFU1.536e-4240.74Elongation factor 2 OS=Pyrococcus furiosus GN=fusA... [more]
EF2_PYRCJ1.536e-4241.15Elongation factor 2 OS=Pyrobaculum calidifontis (s... [more]
EF2_METMP1.536e-4244.29Elongation factor 2 OS=Methanococcus maripaludis G... [more]
EF2_METS32.006e-4242.86Elongation factor 2 OS=Methanobrevibacter smithii ... [more]
EF2_METM53.422e-4244.29Elongation factor 2 OS=Methanococcus maripaludis (... [more]
EF2_THENV4.470e-4241.15Elongation factor 2 OS=Thermoproteus neutrophilus ... [more]
EF2_PYRAE4.470e-4240.71Elongation factor 2 OS=Pyrobaculum aerophilum GN=f... [more]
EF2_METM64.470e-4244.59Elongation factor 2 OS=Methanococcus maripaludis (... [more]
EF2_METVS5.838e-4243.30Elongation factor 2 OS=Methanococcus vannielii (st... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YK14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260199 ID=DY260199; Name=DY260199; organism=Citrus clementina; type=EST; length=1029bp
AGAAATACTGTCCTTGTTGGTAATATTTGAGAATCAGTCAAGATGGTGAA
GTTCACAGCAGAAGAGCTCCGGCGTATTATGGACTTCCCACATAACATCC
GCAATATGTCTGTTATTGCCCATGTTGATCATGGGAAGTCAACCCTTACC
GACTCTCTTGTGGCTGCTGCTGGTATTATCGCCCAAGAAGTTGCTGGCGA
TGTCCGTATGACAGATACTCGTCAGGATGAAGCTGAGCGTGGTATTACAA
TCAAGTCTACTGGTATATCTCTCTACTACGAGATGACTGATGCGGCTTTG
AAGAGCTTCAAGGGAGAGCGTCAAGGGAATGAATACCTCATCAACCTTAT
TGATTCCCCTGGGCACGTCGATTTCTCATCTGAGGTTACAGCTGCCCTTC
GTATCACTGATGGTGCACTTGTGGTCGTAGACTGCATTGAAGGTGTTTGT
GTCCAAACAGAAACTGTGCTTAGACAAGCCCTGGGTGAAAGGATTAGGCC
AGTCTTGACTGTGAACAAGATGGACAGGTGCTTCCTTGAGCTTCAGGTTG
ACGGTGAAGAGGCTTACCAGACTTTCCAGAAAGTGATTGAGAATGCTAAT
GTCATTATGGCTACCTATGAAGATCCCCTCCTTGGCCATGTTCAGGTTTA
CCCTGAAAAGGGAACAGTTGCTTTCTCTGCTGGTTTGCATGGCTGGGCCT
TTACCCTGACAAATTTTGCCAAGATGTATGCCTCCCAGTTCGGAGTTGAT
GAGTCAAAGATGATGGAGAGGCCCGGGGGTGAGAACCTCCTTTGACCCCG
CCTCCAGGAATGGGACCCACCAGAACCACTGGCCCCCCCCCCTTGCAAGC
CTGGGTTTGGTCCCGTTCCCGCCAAGAAACCCCCCAAGCCAAAATCCCCC
ACCTTTTGCCTGAATGAGGGAAAAAAAAAAAACCCGGGGGCCTTAAGTTT
CCAAAAGCCTGGGTGGCCCCCGATGGAAAGTTCCCAAAGAAAAAAGAGAT
TGGAAGGGGTAAAGGGCATTTGGACGAAC
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