DY260204

Overview
NameDY260204
Unique NameDY260204
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1066
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260204 vs. ExPASy Swiss-Prot
Match: PPIB_YARLI (Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia lipolytica GN=CPR2 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.284e-41
Identity = 57/92 (61.96%), Postives = 66/92 (71.74%), Query Frame = 2
Query:  260 GNGTGGQSIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNK-PVVIAD 532
            G+GTGG+SIYG KF DENF  KHT P  LSMANAG  TNGSQFF+ T  T WLDGKHVVFG+V+EG D+V AIE   + +    K  + IAD
Sbjct:   98 GDGTGGESIYGRKFPDENFQLKHTKPYKLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGQDIVDAIENAPTGARSNPKVDITIAD 189          

HSP 2 Score: 78.5666 bits (192), Expect = 1.284e-41
Identity = 40/71 (56.34%), Postives = 45/71 (63.38%), Query Frame = 1
Query:   43 KVFFHMTVGGPPAGRFVMELFADVTPRTAENFPALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFT 255
            KV+F +  G    G+ VM L+ DV P+T ENF ALCTGE G G       YKGS FHRVI  FM QGGDFT
Sbjct:   33 KVYFDIKQGEESLGKIVMGLYGDVVPKTVENFRALCTGETGKG-------YKGSKFHRVIKNFMIQGGDFT 96          
BLAST of DY260204 vs. ExPASy Swiss-Prot
Match: PPIB_NEUCR (Peptidyl-prolyl cis-trans isomerase B OS=Neurospora crassa GN=cpr-2 PE=3 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 4.804e-41
Identity = 52/74 (70.27%), Postives = 60/74 (81.08%), Query Frame = 2
Query:  260 GNGTGGQSIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIE 481
            G+GTGG+SIYG KF DENF  KH+  G+LSMANAG  TNGSQFF+ T  T WLDGKHVVFG+V+EG DVV+ IE
Sbjct:  101 GDGTGGKSIYGDKFPDENFKLKHSKKGLLSMANAGKDTNGSQFFITTVITSWLDGKHVVFGEVLEGYDVVEKIE 174          

HSP 2 Score: 78.5666 bits (192), Expect = 4.804e-41
Identity = 40/71 (56.34%), Postives = 46/71 (64.79%), Query Frame = 1
Query:   43 KVFFHMTVGGPPAGRFVMELFADVTPRTAENFPALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFT 255
            KV+F +  G  P GR VM L+    P+TAENF AL TGEKG G       Y+GS+FHRVI  FM QGGDFT
Sbjct:   36 KVYFDIEQGDKPLGRIVMGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKQFMIQGGDFT 99          
BLAST of DY260204 vs. ExPASy Swiss-Prot
Match: PPIB_SCHMA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma mansoni GN=CYP PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 8.196e-41
Identity = 58/92 (63.04%), Postives = 68/92 (73.91%), Query Frame = 2
Query:  263 NGTGGQSIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIE-KVGSSSGRTNKPVVIADC 535
            +GTGG SIYG +F DENF  +H G G LSMANAGP TNGSQFF+ T KT WLDGKHVVFG+VVEGM++V+ IE +   S  R  K + IA C
Sbjct:  104 DGTGGFSIYGDRFPDENFKLRHVGAGWLSMANAGPDTNGSQFFITTVKTSWLDGKHVVFGKVVEGMNIVRQIESETTDSRDRPVKSIKIASC 195          

HSP 2 Score: 71.2478 bits (173), Expect = 8.196e-41
Identity = 36/71 (50.70%), Postives = 43/71 (60.56%), Query Frame = 1
Query:   43 KVFFHMTVGGPPAGRFVMELFADVTPRTAENFPALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFT 255
            KVFF + V G P  R ++ LF    P+T ENF  L  G +   K G+   YKGS+FHRVI  FM QGGDFT
Sbjct:   33 KVFFDIEVDGKPLARIIIGLFGKTVPKTVENFKQLSIGTQL--KDGRTASYKGSTFHRVIKSFMIQGGDFT 101          
BLAST of DY260204 vs. ExPASy Swiss-Prot
Match: PPIB_ASPOR (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus oryzae GN=cpr2 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.215e-41
Identity = 55/88 (62.50%), Postives = 66/88 (75.00%), Query Frame = 2
Query:  260 GNGTGGQSIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVV 523
            G+GTGG+SIYG KF DENF  +HT  G+LSMANAG  TNGSQFF+ T  T WLDG+HVVFG+V+EG +VV+AIE V    G   + VV
Sbjct:   86 GDGTGGKSIYGEKFKDENFKIRHTKKGLLSMANAGKDTNGSQFFITTVATPWLDGRHVVFGEVLEGYEVVEAIENVPKVPGDKPQQVV 173          

HSP 2 Score: 75.0998 bits (183), Expect = 8.215e-41
Identity = 38/70 (54.29%), Postives = 45/70 (64.29%), Query Frame = 1
Query:   46 VFFHMTVGGPPAGRFVMELFADVTPRTAENFPALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFT 255
            V+F +  G  P GR V+ L+    P+TAENF AL TGEKG G       Y+GS+FHRVI  FM QGGDFT
Sbjct:   22 VYFDIEHGNKPLGRVVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKEFMIQGGDFT 84          
BLAST of DY260204 vs. ExPASy Swiss-Prot
Match: PPIH_RHIOR (Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus oryzae GN=cyp7 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.372e-40
Identity = 51/105 (48.57%), Postives = 71/105 (67.62%), Query Frame = 2
Query:  227 DSCARGETSPAGNGTGGQSIYGS-KFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSS-SGRTNKPVVIADC 535
            D   +G     G+GTG   IYG  +FADENF++KHTG G+LSMAN+GP +NG QFF+     ++LDGKHVVFG++V+G+  ++ IE V +  + R   PV I +C
Sbjct:   71 DFMVQGGDFIKGDGTGAMCIYGGDRFADENFIEKHTGAGLLSMANSGPNSNGCQFFITCDACDFLDGKHVVFGRLVDGLLTLRKIENVATGPNNRPKLPVKITEC 175          

HSP 2 Score: 84.3445 bits (207), Expect = 2.372e-40
Identity = 41/76 (53.95%), Postives = 51/76 (67.11%), Query Frame = 1
Query:   25 SKMPNPKVFFHMTVGGPPAGRFVMELFADVTPRTAENFPALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDF 252
            +++  P VFF +++G  P GR  MELF+D+ PRTAENF  LCTGE    ++G P  YK   FHRVI  FM QGGDF
Sbjct:    6 NQVERPVVFFDISIGDVPVGRMKMELFSDIVPRTAENFRQLCTGE--YKRNGVPQGYKNCLFHRVIKDFMVQGGDF 79          
BLAST of DY260204 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 4.407e-40
Identity = 80/107 (74.77%), Postives = 85/107 (79.44%), Query Frame = 2
Query:  224 PDSCARGETSPAGNGTGGQSIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCRPL 544
            P    +G    AGNGTGG+SIYG KF DENFVKKHTGPGILSM NAG  TNGSQFF+CT KT WLDGKHVVFGQVVEGMDVV+ IEKVGS SGRT+K VV  DC  L
Sbjct:   65 PKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKKHTGPGILSMRNAGSNTNGSQFFICTEKTSWLDGKHVVFGQVVEGMDVVRDIEKVGSDSGRTSKKVVTCDCGQL 171          

HSP 2 Score: 130.183 bits (326), Expect = 2.052e-29
Identity = 60/75 (80.00%), Postives = 64/75 (85.33%), Query Frame = 1
Query:   31 MPNPKVFFHMTVGGPPAGRFVMELFADVTPRTAENFPALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFT 255
            M NPKV+F MTVG   AGR VMEL+AD  P TAENF ALCTGE+GIGKSGKPLHYKGS+FHRVIP FMCQGGDFT
Sbjct:    1 MVNPKVYFDMTVGDKAAGRIVMELYADTVPETAENFRALCTGERGIGKSGKPLHYKGSAFHRVIPKFMCQGGDFT 75          
BLAST of DY260204 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 9.817e-40
Identity = 78/108 (72.22%), Postives = 88/108 (81.48%), Query Frame = 2
Query:  224 PDSCARGETSPAGNGTGGQSIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCRPLS 547
            P    +G    A NGTGG+SIYG+KF DENF+KKHTG GILSMAN+GP TNGSQFF+CT KT WLDGKHVVFGQVV+G+DVVKAIEKVGS SG+T+K V I DC  LS
Sbjct:   65 PGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQLS 172          

HSP 2 Score: 128.257 bits (321), Expect = 7.797e-29
Identity = 58/75 (77.33%), Postives = 63/75 (84.00%), Query Frame = 1
Query:   31 MPNPKVFFHMTVGGPPAGRFVMELFADVTPRTAENFPALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFT 255
            M NP+VFF M++ G P GR  MELFAD TP TAENF ALCTGEKG+GK GKPLH+KGS FHRVIPGFMCQGGDFT
Sbjct:    1 MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFT 75          
BLAST of DY260204 vs. ExPASy Swiss-Prot
Match: PPIB_SCHJA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.156e-39
Identity = 58/92 (63.04%), Postives = 68/92 (73.91%), Query Frame = 2
Query:  263 NGTGGQSIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS-GRTNKPVVIADC 535
            +GTGG SIYG +F DENF  KH G G LSMANAGP TNG+QFF+ T +  WLDGKHVVFG+VVEGM VV+ IE + + S  R  K V IA+C
Sbjct:  104 DGTGGFSIYGERFPDENFKLKHVGAGWLSMANAGPNTNGAQFFITTTQNPWLDGKHVVFGKVVEGMSVVRQIENMQTDSRDRPVKSVKIANC 195          

HSP 2 Score: 69.3218 bits (168), Expect = 1.156e-39
Identity = 36/71 (50.70%), Postives = 42/71 (59.15%), Query Frame = 1
Query:   43 KVFFHMTVGGPPAGRFVMELFADVTPRTAENFPALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFT 255
            KVFF + V   P GR ++ LF    P+T ENF  L  G     K G+   YKGS+FHRVI  FM QGGDFT
Sbjct:   33 KVFFDIEVDEQPLGRIIIGLFGKTVPKTVENFKQLSIGTTL--KDGRTAAYKGSTFHRVIKSFMIQGGDFT 101          
BLAST of DY260204 vs. ExPASy Swiss-Prot
Match: CYP8_CAEEL (Peptidyl-prolyl cis-trans isomerase 8 OS=Caenorhabditis elegans GN=cyn-8 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.287e-39
Identity = 51/87 (58.62%), Postives = 63/87 (72.41%), Query Frame = 2
Query:  260 GNGTGGQSIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 520
            GNGTGG SIYG  F DEN   KH  P +LSMAN GP TNGSQFF+ + +   LDGKH VFG+V++G++VVKAIE +   +G  +KPV
Sbjct:   81 GNGTGGYSIYGRTFDDENLALKHKKPYLLSMANRGPDTNGSQFFITSEEVPHLDGKHCVFGEVIKGVEVVKAIENL--ETGNEDKPV 165          

HSP 2 Score: 78.9518 bits (193), Expect = 4.287e-39
Identity = 40/78 (51.28%), Postives = 47/78 (60.26%), Query Frame = 1
Query:   22 PSKMPNPKVFFHMTVGGPPAGRFVMELFADVTPRTAENFPALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFT 255
            P    N + FF +++ G PAGR V  L+    PRT ENF A CTGE G   +G    Y+GS FHRVI GFM QGGD T
Sbjct:    3 PEVRGNKRAFFDISINGEPAGRIVFSLWNHCCPRTVENFRAFCTGELG-KMNGHYASYQGSVFHRVIKGFMIQGGDIT 79          
BLAST of DY260204 vs. ExPASy Swiss-Prot
Match: PPID_SCHPO (40 kDa peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=wis2 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.240e-38
Identity = 55/92 (59.78%), Postives = 66/92 (71.74%), Query Frame = 2
Query:  260 GNGTGGQSIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADC 535
            GNGTGG+SIYG KF DENF  KH  P +LSMANAGP TNGSQFF+ T  T  LDGKHVVFG+V++G   V+ IE + + +     PVVI +C
Sbjct:   73 GNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLETKNDDPVVPVVIEEC 164          

HSP 2 Score: 66.2402 bits (160), Expect = 1.240e-38
Identity = 33/69 (47.83%), Postives = 43/69 (62.32%), Query Frame = 1
Query:   49 FFHMTVGGPPAGRFVMELFADVTPRTAENFPALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFT 255
            +F +++ G        ELF +V P+T +NF +LC G +   K G+ L YKGS FHRVI  FM QGGDFT
Sbjct:    6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFE---KDGRCLTYKGSRFHRVIKNFMLQGGDFT 71          
The following BLAST results are available for this feature:
BLAST of DY260204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 240
Match NameE-valueIdentityDescription
PPIB_YARLI1.284e-4161.96Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia ... [more]
PPIB_NEUCR4.804e-4170.27Peptidyl-prolyl cis-trans isomerase B OS=Neurospor... [more]
PPIB_SCHMA8.196e-4163.04Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPIB_ASPOR8.215e-4162.50Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIH_RHIOR2.372e-4048.57Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus ... [more]
CYPH_BRANA4.407e-4074.77Peptidyl-prolyl cis-trans isomerase OS=Brassica na... [more]
CP18D_ARATH9.817e-4072.22Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
PPIB_SCHJA1.156e-3963.04Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
CYP8_CAEEL4.287e-3958.62Peptidyl-prolyl cis-trans isomerase 8 OS=Caenorhab... [more]
PPID_SCHPO1.240e-3859.7840 kDa peptidyl-prolyl cis-trans isomerase OS=Schi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YK22FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260204 ID=DY260204; Name=DY260204; organism=Citrus clementina; type=EST; length=1066bp
GTTTTTTTCCCCCTCATCAACCCATCCAAAATGCCAAACCCCAAAGTGTT
CTTCCACATGACCGTCGGCGGTCCGCCCGCCGGCAGGTTCGTGATGGAGC
TCTTCGCCGATGTCACCCCCCGAACCGCCGAGAACTTCCCCGCCCTCTGC
ACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAGCCACTCCACTACAAGGG
CTCGTCCTTCCACCGTGTGATCCCCGGATTCATGTGCCAGGGGGGAGACT
TCACCCGCCGGAAACGGAACCGGAGGCCAATCAATCTACGGCTCAAAATT
CGCCGATGAGAACTTCGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCA
TGGCGAATGCCGGACCCGGAACCAACGGATCTCAGTTCTTCGTCTGTACG
GCCAAGACCGAGTGGCTCGATGGGAAGCACGTTGTGTTCGGTCAAGTCGT
CGAAGGAATGGACGTCGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCG
GAAGGACCAACAAGCCCGTCGTGATCGCTGATTGCCGTCCATTGTCTTAG
ATTTGATCCTGATAATGATCGCCCTCATCCACAGCCGTCTGATCGCGATC
GTGATGGTGATTATGTTATCTATTATTATGTGGCCGTGTCCGTAGGACTT
TTAATCTTTATCTAATTTTCCCGCCATGTTCCTTGTTCCGGTTGGATCGG
GTCTCCCGTGGTGGTTCCTGAAGAACTGTTTTTTATGTCCTTCCATGAGC
CGCCTTTTTAAATAAAACAAGGCCTTGTCCCTGTAAATTAAAAAAAAAAA
AAAAAAAAAAACCCCAACTTCCTTGTACAAAGTTGGGACTAAAAAAAAAA
CCTTGCCTTATCATCTTTTTCCCCCAACCGGGTCCCCATCCCCCCCACTT
AAAATTCCTTTATTTCCCCACCCCCCCTAAACCCCCCCCAAAACCAGTCC
CTAATACACGGGCCCATAGCCCGTTTCCCCGGGCCCCCCCCGCCCCGCTC
TTCCCCAAATCCCCCGCAAGTTTTCCTTCGGCCTAGAATACCAAAAATCT
CTCCCTCGCTCTTCAA
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