DY260204

Overview
NameDY260204
Unique NameDY260204
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1066
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY260204 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLE (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates leucogenys GN=PPIA PE=3 SV=3)

HSP 1 Score: 156.762 bits (395), Expect = 2.047e-37
Identity = 72/107 (67.29%), Postives = 86/107 (80.37%), Query Frame = 2 
Query:  224 PDSCARGETSPAGNGTGGQSIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCRPL 544
            P    +G      NGTGG+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADC  L
Sbjct:   58 PGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164

HSP 2 Score: 98.9821 bits (245), Expect = 5.065e-20
Identity = 49/75 (65.33%), Postives = 52/75 (69.33%), Query Frame = 1 
Query:   31 MPNPKVFFHMTVGGPPAGRFVMELFADVTPRTAENFPALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFT 255
            M NP VFF + V G P GR   ELFAD  P+TAENF AL TGEKG G       YKGS FHR+IPGFMCQGGDFT
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFT 68
[Close]
BLAST of DY260204 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLA (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates lar GN=PPIA PE=3 SV=3)

HSP 1 Score: 156.762 bits (395), Expect = 2.047e-37
Identity = 72/107 (67.29%), Postives = 86/107 (80.37%), Query Frame = 2 
Query:  224 PDSCARGETSPAGNGTGGQSIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCRPL 544
            P    +G      NGTGG+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADC  L
Sbjct:   58 PGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164

HSP 2 Score: 98.9821 bits (245), Expect = 5.065e-20
Identity = 49/75 (65.33%), Postives = 52/75 (69.33%), Query Frame = 1 
Query:   31 MPNPKVFFHMTVGGPPAGRFVMELFADVTPRTAENFPALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFT 255
            M NP VFF + V G P GR   ELFAD  P+TAENF AL TGEKG G       YKGS FHR+IPGFMCQGGDFT
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFT 68
[Close]
BLAST of DY260204 vs. ExPASy Swiss-Prot
Match: PPIA_HUMAN (Peptidyl-prolyl cis-trans isomerase A OS=Homo sapiens GN=PPIA PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 2.047e-37
Identity = 72/107 (67.29%), Postives = 86/107 (80.37%), Query Frame = 2 
Query:  224 PDSCARGETSPAGNGTGGQSIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCRPL 544
            P    +G      NGTGG+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADC  L
Sbjct:   58 PGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164

HSP 2 Score: 98.9821 bits (245), Expect = 5.065e-20
Identity = 49/75 (65.33%), Postives = 52/75 (69.33%), Query Frame = 1 
Query:   31 MPNPKVFFHMTVGGPPAGRFVMELFADVTPRTAENFPALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFT 255
            M NP VFF + V G P GR   ELFAD  P+TAENF AL TGEKG G       YKGS FHR+IPGFMCQGGDFT
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFT 68
[Close]
BLAST of DY260204 vs. ExPASy Swiss-Prot
Match: PPIA_GORGO (Peptidyl-prolyl cis-trans isomerase A OS=Gorilla gorilla gorilla GN=PPIA PE=3 SV=3)

HSP 1 Score: 156.762 bits (395), Expect = 2.047e-37
Identity = 72/107 (67.29%), Postives = 86/107 (80.37%), Query Frame = 2 
Query:  224 PDSCARGETSPAGNGTGGQSIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCRPL 544
            P    +G      NGTGG+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADC  L
Sbjct:   58 PGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164

HSP 2 Score: 98.9821 bits (245), Expect = 5.065e-20
Identity = 49/75 (65.33%), Postives = 52/75 (69.33%), Query Frame = 1 
Query:   31 MPNPKVFFHMTVGGPPAGRFVMELFADVTPRTAENFPALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFT 255
            M NP VFF + V G P GR   ELFAD  P+TAENF AL TGEKG G       YKGS FHR+IPGFMCQGGDFT
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFT 68
[Close]
BLAST of DY260204 vs. ExPASy Swiss-Prot
Match: PPIA_CERAE (Peptidyl-prolyl cis-trans isomerase A OS=Cercopithecus aethiops GN=PPIA PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 2.047e-37
Identity = 72/107 (67.29%), Postives = 86/107 (80.37%), Query Frame = 2 
Query:  224 PDSCARGETSPAGNGTGGQSIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCRPL 544
            P    +G      NGTGG+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADC  L
Sbjct:   58 PGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164

HSP 2 Score: 98.9821 bits (245), Expect = 5.065e-20
Identity = 49/75 (65.33%), Postives = 52/75 (69.33%), Query Frame = 1 
Query:   31 MPNPKVFFHMTVGGPPAGRFVMELFADVTPRTAENFPALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFT 255
            M NP VFF + V G P GR   ELFAD  P+TAENF AL TGEKG G       YKGS FHR+IPGFMCQGGDFT
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFT 68
[Close]
BLAST of DY260204 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 2.047e-37
Identity = 74/108 (68.52%), Postives = 84/108 (77.78%), Query Frame = 2 
Query:  224 PDSCARGETSPAGNGTGGQSIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCRPLS 547
            P+   +G     GNGTGG+SIYG KF DE FV+K   PG+LSMANAGP TNGSQFF+CT  T WLDGKHVVFGQVVEGMDVVKAIEKVG+ +G T+K V +ADC  LS
Sbjct:   65 PEFMCQGGDFTRGNGTGGESIYGEKFPDEKFVRKQPAPGVLSMANAGPNTNGSQFFICTVATPWLDGKHVVFGQVVEGMDVVKAIEKVGTRNGSTSKVVKVADCGQLS 172

HSP 2 Score: 135.191 bits (339), Expect = 6.378e-31
Identity = 61/75 (81.33%), Postives = 67/75 (89.33%), Query Frame = 1 
Query:   31 MPNPKVFFHMTVGGPPAGRFVMELFADVTPRTAENFPALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFT 255
            M NP+VFF MTVGG PAGR VMEL+A+  P+TAENF ALCTGEKG+GKSGKPLHYKGS+FHRVIP FMCQGGDFT
Sbjct:    1 MANPRVFFDMTVGGAPAGRIVMELYANEVPKTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFT 75
[Close]
BLAST of DY260204 vs. ExPASy Swiss-Prot
Match: PPIA_PIG (Peptidyl-prolyl cis-trans isomerase A OS=Sus scrofa GN=PPIA PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 3.492e-37
Identity = 71/104 (68.27%), Postives = 85/104 (81.73%), Query Frame = 2 
Query:  224 PDSCARGETSPAGNGTGGQSIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADC 535
            P    +G      NGTGG+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADC
Sbjct:   58 PGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADC 161

HSP 2 Score: 98.9821 bits (245), Expect = 5.065e-20
Identity = 49/75 (65.33%), Postives = 52/75 (69.33%), Query Frame = 1 
Query:   31 MPNPKVFFHMTVGGPPAGRFVMELFADVTPRTAENFPALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFT 255
            M NP VFF + V G P GR   ELFAD  P+TAENF AL TGEKG G       YKGS FHR+IPGFMCQGGDFT
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFT 68
[Close]
BLAST of DY260204 vs. ExPASy Swiss-Prot
Match: PPIA_BOVIN (Peptidyl-prolyl cis-trans isomerase A OS=Bos taurus GN=PPIA PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 3.492e-37
Identity = 71/104 (68.27%), Postives = 85/104 (81.73%), Query Frame = 2 
Query:  224 PDSCARGETSPAGNGTGGQSIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADC 535
            P    +G      NGTGG+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADC
Sbjct:   58 PGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADC 161

HSP 2 Score: 98.9821 bits (245), Expect = 5.065e-20
Identity = 49/75 (65.33%), Postives = 52/75 (69.33%), Query Frame = 1 
Query:   31 MPNPKVFFHMTVGGPPAGRFVMELFADVTPRTAENFPALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFT 255
            M NP VFF + V G P GR   ELFAD  P+TAENF AL TGEKG G       YKGS FHR+IPGFMCQGGDFT
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFT 68
[Close]
BLAST of DY260204 vs. ExPASy Swiss-Prot
Match: PPIA_MOUSE (Peptidyl-prolyl cis-trans isomerase A OS=Mus musculus GN=Ppia PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 4.560e-37
Identity = 71/107 (66.36%), Postives = 86/107 (80.37%), Query Frame = 2 
Query:  224 PDSCARGETSPAGNGTGGQSIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCRPL 544
            P    +G      NGTGG+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + I+DC  L
Sbjct:   58 PGFMCQGGDFTRHNGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITISDCGQL 164

HSP 2 Score: 98.5969 bits (244), Expect = 6.616e-20
Identity = 49/75 (65.33%), Postives = 52/75 (69.33%), Query Frame = 1 
Query:   31 MPNPKVFFHMTVGGPPAGRFVMELFADVTPRTAENFPALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFT 255
            M NP VFF +T    P GR   ELFAD  P+TAENF AL TGEKG G       YKGSSFHR+IPGFMCQGGDFT
Sbjct:    1 MVNPTVFFDITADDEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFT 68
[Close]
BLAST of DY260204 vs. ExPASy Swiss-Prot
Match: PPIA_FELCA (Peptidyl-prolyl cis-trans isomerase A OS=Felis catus GN=PPIA PE=2 SV=3)

HSP 1 Score: 155.606 bits (392), Expect = 4.560e-37
Identity = 71/104 (68.27%), Postives = 84/104 (80.77%), Query Frame = 2 
Query:  224 PDSCARGETSPAGNGTGGQSIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADC 535
            P    +G      NGTGG+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG V EGM++V+A+E+ GS +G+T+K + IADC
Sbjct:   58 PGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGMVKEGMNIVEAMERFGSRNGKTSKKITIADC 161

HSP 2 Score: 97.0561 bits (240), Expect = 1.925e-19
Identity = 48/75 (64.00%), Postives = 52/75 (69.33%), Query Frame = 1 
Query:   31 MPNPKVFFHMTVGGPPAGRFVMELFADVTPRTAENFPALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFT 255
            M NP VFF + V G P GR   +LFAD  P+TAENF AL TGEKG G       YKGS FHR+IPGFMCQGGDFT
Sbjct:    1 MVNPIVFFDIAVDGEPLGRVSFDLFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFT 68
The following BLAST results are available for this feature:
BLAST of DY260204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 240
Match NameE-valueIdentityDescription
PPIA_HYLLE2.047e-3767.29Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLA2.047e-3767.29Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HUMAN2.047e-3767.29Peptidyl-prolyl cis-trans isomerase A OS=Homo sapi... [more]
PPIA_GORGO2.047e-3767.29Peptidyl-prolyl cis-trans isomerase A OS=Gorilla g... [more]
PPIA_CERAE2.047e-3767.29Peptidyl-prolyl cis-trans isomerase A OS=Cercopith... [more]
CYPH_MAIZE2.047e-3768.52Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN... [more]
PPIA_PIG3.492e-3768.27Peptidyl-prolyl cis-trans isomerase A OS=Sus scrof... [more]
PPIA_BOVIN3.492e-3768.27Peptidyl-prolyl cis-trans isomerase A OS=Bos tauru... [more]
PPIA_MOUSE4.560e-3766.36Peptidyl-prolyl cis-trans isomerase A OS=Mus muscu... [more]
PPIA_FELCA4.560e-3768.27Peptidyl-prolyl cis-trans isomerase A OS=Felis cat... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YK22FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260204 ID=DY260204; Name=DY260204; organism=Citrus clementina; type=EST; length=1066bp
GTTTTTTTCCCCCTCATCAACCCATCCAAAATGCCAAACCCCAAAGTGTT
CTTCCACATGACCGTCGGCGGTCCGCCCGCCGGCAGGTTCGTGATGGAGC
TCTTCGCCGATGTCACCCCCCGAACCGCCGAGAACTTCCCCGCCCTCTGC
ACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAGCCACTCCACTACAAGGG
CTCGTCCTTCCACCGTGTGATCCCCGGATTCATGTGCCAGGGGGGAGACT
TCACCCGCCGGAAACGGAACCGGAGGCCAATCAATCTACGGCTCAAAATT
CGCCGATGAGAACTTCGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCA
TGGCGAATGCCGGACCCGGAACCAACGGATCTCAGTTCTTCGTCTGTACG
GCCAAGACCGAGTGGCTCGATGGGAAGCACGTTGTGTTCGGTCAAGTCGT
CGAAGGAATGGACGTCGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCG
GAAGGACCAACAAGCCCGTCGTGATCGCTGATTGCCGTCCATTGTCTTAG
ATTTGATCCTGATAATGATCGCCCTCATCCACAGCCGTCTGATCGCGATC
GTGATGGTGATTATGTTATCTATTATTATGTGGCCGTGTCCGTAGGACTT
TTAATCTTTATCTAATTTTCCCGCCATGTTCCTTGTTCCGGTTGGATCGG
GTCTCCCGTGGTGGTTCCTGAAGAACTGTTTTTTATGTCCTTCCATGAGC
CGCCTTTTTAAATAAAACAAGGCCTTGTCCCTGTAAATTAAAAAAAAAAA
AAAAAAAAAAACCCCAACTTCCTTGTACAAAGTTGGGACTAAAAAAAAAA
CCTTGCCTTATCATCTTTTTCCCCCAACCGGGTCCCCATCCCCCCCACTT
AAAATTCCTTTATTTCCCCACCCCCCCTAAACCCCCCCCAAAACCAGTCC
CTAATACACGGGCCCATAGCCCGTTTCCCCGGGCCCCCCCCGCCCCGCTC
TTCCCCAAATCCCCCGCAAGTTTTCCTTCGGCCTAGAATACCAAAAATCT
CTCCCTCGCTCTTCAA
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