DY260217

Overview
NameDY260217
Unique NameDY260217
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1063
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260217 vs. ExPASy Swiss-Prot
Match: PRKX_MOUSE (Serine/threonine-protein kinase PRKX OS=Mus musculus GN=Prkx PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.851e-31
Identity = 79/232 (34.05%), Postives = 125/232 (53.88%), Query Frame = 1
Query:   97 LGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQ-IKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIA-KGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLASFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLL 786
            +G GTF +V L +  +TG+                  EQ ++ E +V+K + H  +++L         +Y  M+ V GGELF  +  +GR     +  Y  +++ A+++ HS+ + +RDLKPEN+LLD +G++K+TDFG +      K      T CGTP Y+APEVI  KG+ G   D W+ G++++ +L+ F PF DDN   +Y+KI       P      ++ LI KLL
Sbjct:   52 VGTGTFGRVNLVKE-KTGRQYCALKIMSIPDVIRLKQEQHVQNEKAVLKEINHPFLIKLLWTGHDNRFLYMLMEFVPGGELFTYLRNRGRFSSVASVFYATEIVCAIEYLHSKEIVYRDLKPENILLDREGHIKLTDFGFAK-----KLVDRTWTLCGTPEYLAPEVIQSKGH-GRAVDWWALGILIFEMLSGFPPFFDDNPFGIYQKILACKIDFPRQLDFTSKDLIKKLL 276          
BLAST of DY260217 vs. ExPASy Swiss-Prot
Match: KPC1B_CAEEL (Protein kinase C-like 1B OS=Caenorhabditis elegans GN=pkc-1 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 2.851e-31
Identity = 77/241 (31.95%), Postives = 121/241 (50.21%), Query Frame = 1
Query:   91 RMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMV-KHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKGR-LREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLASFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLLDPNPNSR 807
            ++LG G+F KV LA    T +  A               E    E  ++ +  KH  +  LH    +  +++F M+ V GG+L  +I + R   E  AR Y  ++  A+ F H   V +RDLK +N+LLD +G+ ++ DFG+    E + +D L  T CGTP Y+APE++ +  Y G   D W+ GV++Y ++A   PF+ DN   ++  I   D   P W S EA  ++   +  N   R
Sbjct:  382 KVLGKGSFGKVMLAERKGTDEVYAIKILKKDVIVQDDDVECTMCEKRILSLAAKHPFLTALHSSFQTSDRLFFVMEYVNGGDLMFQIQRARKFDESRARFYAAEVTCALQFLHRNDVIYRDLKLDNILLDAEGHCRLADFGMC--KEGINKDNLTSTFCGTPDYIAPEILQEMEY-GVSVDWWALGVLMYEMMAGQPPFEADNEDDLFEAILNDDVLYPVWLSKEAVNILKAFMTKNAGKR 619          
BLAST of DY260217 vs. ExPASy Swiss-Prot
Match: CDPK1_PLAFK (Calcium-dependent protein kinase 1 OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CPK1 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 3.339e-31
Identity = 78/208 (37.50%), Postives = 117/208 (56.25%), Query Frame = 1
Query:  208 EQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIA-KGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDG---NLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLASFLPFQDDNIVSMYRKIYRG----DFKCPPWFSSEARRLITKLLDPNPNSR 807
            E+I  EIS++K + H +I++L +V   K   Y   +  +GGELF +I  + +  E  A    +Q++S + + H   + HRD+KPEN+LL+      N+K+ DFGLS+F     +D  L    GT  Y+APEV+ KK  +  K D+WSCGVILY+LL  + PF   N   + +K+ +G    DF      S EA+ LI  +L  + N R
Sbjct:  111 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKHSLLNIKIVDFGLSSF---FSKDNKLRDRLGTAYYIAPEVLRKKYNE--KCDVWSCGVILYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISEEAKELIKLMLTYDYNKR 313          

HSP 2 Score: 22.7126 bits (47), Expect = 3.339e-31
Identity = 10/25 (40.00%), Postives = 13/25 (52.00%), Query Frame = 3
Query:   90 AYARPRNLREGVPGKKFADGEKHGH 164
            +Y + R L  G  G+     EKHGH
Sbjct:   55 SYFKVRKLGSGAYGEVLLCREKHGH 79          
BLAST of DY260217 vs. ExPASy Swiss-Prot
Match: CDPK1_PLAF7 (Calcium-dependent protein kinase 1 OS=Plasmodium falciparum (isolate 3D7) GN=CPK1 PE=3 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 3.339e-31
Identity = 78/208 (37.50%), Postives = 117/208 (56.25%), Query Frame = 1
Query:  208 EQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIA-KGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDG---NLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLASFLPFQDDNIVSMYRKIYRG----DFKCPPWFSSEARRLITKLLDPNPNSR 807
            E+I  EIS++K + H +I++L +V   K   Y   +  +GGELF +I  + +  E  A    +Q++S + + H   + HRD+KPEN+LL+      N+K+ DFGLS+F     +D  L    GT  Y+APEV+ KK  +  K D+WSCGVILY+LL  + PF   N   + +K+ +G    DF      S EA+ LI  +L  + N R
Sbjct:  111 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKHSLLNIKIVDFGLSSF---FSKDNKLRDRLGTAYYIAPEVLRKKYNE--KCDVWSCGVILYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISEEAKELIKLMLTYDYNKR 313          

HSP 2 Score: 22.7126 bits (47), Expect = 3.339e-31
Identity = 10/25 (40.00%), Postives = 13/25 (52.00%), Query Frame = 3
Query:   90 AYARPRNLREGVPGKKFADGEKHGH 164
            +Y + R L  G  G+     EKHGH
Sbjct:   55 SYFKVRKLGSGAYGEVLLCREKHGH 79          
BLAST of DY260217 vs. ExPASy Swiss-Prot
Match: Y2070_DICDI (Probable serine/threonine-protein kinase DDB_G0277449 OS=Dictyostelium discoideum GN=DDB_G0277449 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.723e-31
Identity = 82/239 (34.31%), Postives = 118/239 (49.37%), Query Frame = 1
Query:   94 MLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKGRL-REDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLASFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLLDPNPNSR 807
            ++G G F KV+   ++ T K  A                    E  ++K + H  IV LH    ++ K+Y  MD V GG+LF  + K  +  ED  R Y  +LI A++  H   + HRDLKPEN+LLD  G+  +TDFGL+     +K +    +  GT  Y+APE+I +    G   D WS G+++Y ++    PF+  N   M  KI     K P + SS AR LI  LL  +P  R
Sbjct:  133 LVGKGGFGKVFQVVHVDTQKVYALKVIKKNHIIAKKSVVNTLAEKDILKKISHPFIVNLHYAFQNEKKLYLVMDFVNGGQLFYHLQKEAIFSEDQVRFYMAELILALEHLHDSNIVHRDLKPENILLDSQGHCILTDFGLAKL--EVKTNNETFSFAGTLEYMAPEMI-QHATCGKAVDWWSIGILMYDMMIGKPPFEHKNRALMQEKIISEKAKFPKFVSSSARSLINGLLTKDPTKR 368          
BLAST of DY260217 vs. ExPASy Swiss-Prot
Match: ULK1_MOUSE (Serine/threonine-protein kinase ULK1 OS=Mus musculus GN=Ulk1 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.723e-31
Identity = 88/270 (32.59%), Postives = 137/270 (50.74%), Query Frame = 1
Query:   73 GKYELGR--MLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKGR-LREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDG---------NLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLASFLPFQ---DDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLLDPNPNSR---NPYFQDP 828
            GK+E  R  ++GHG FA V+  R+ +    +                  + +EI ++K +KH++IV L++     + +Y  M+   GG+L + +   R L ED  R++ QQ+  A+   HS+G+ HRDLKP+N+LL   G          +K+ DFG   F+ +L+ + +  T CG+P Y+APEVI  + YDG KAD+WS G I+Y  L    PFQ     ++   Y K        P   S+  R+L+  LL  N   R   + +F  P
Sbjct:   12 GKFEFSRKDLIGHGAFAVVFKGRHREK-HDLEVAVKCINKKNLAKSQTLLGKEIKILKELKHENIVALYDFQEMANSVYLVMEYCNGGDLADYLHTMRTLSEDTVRLFLQQIAGAMRLLHSKGIIHRDLKPQNILLSNPGGRRANPSNIRVKIADFG---FARYLQSNMMAATLCGSPMYMAPEVIMSQHYDG-KADLWSIGTIVYQCLTGKAPFQASSPQDLRLFYEKNKTLVPAIPRETSAPLRQLLLALLQRNHKDRMDFDEFFHHP 276          
BLAST of DY260217 vs. ExPASy Swiss-Prot
Match: PXI_DICDI (Probable serine/threonine-protein kinase pXi OS=Dictyostelium discoideum GN=pXi PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.723e-31
Identity = 91/274 (33.21%), Postives = 135/274 (49.27%), Query Frame = 1
Query:   67 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKGRL-REDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGN---LKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLASFLPFQDDNIVSMYRKIYRGDFKCPPW--FSSEARRLITKLLDPNPNSRNPYFQDPGILLVPKVCSPGCG 870
            +H  YE+G  +G+G FA+V+   N  TGK  A                 I +EI +M  + H++I++L EV  + +++   ++LV GGELF+KI +     E  A      +   + + HS+ + H DLKPENLL  ++ +   +K+ DFGL   S+       L +  GT  Y+APE+ S  GY G   D+WS GVI Y+LL  F PF +          Y  +F  P W   S  A+ LI  LL+ +P+ R   F     L  P +    CG
Sbjct:   14 IHKSYEIGSQIGNGKFAQVHSGTNKSTGKKSAIKIMKKSIVEE----SAIIKEIEMMTEINHQNIIKLQEVYETDNEVLLVLELVTGGELFDKIVEREFYTEQDASTLIGTVTKVIQYLHSKDIVHCDLKPENLLYSDNSDQAIIKLCDFGL---SQRCGSGSPLRSLVGTLTYMAPEISSCTGY-GKPVDLWSIGVISYILLCGFPPFDETT-------GYVLEFPSPEWDNISDSAKSLIKGLLNNDPSKR---FTIDQTLKHPWIAGTTCG 269          
BLAST of DY260217 vs. ExPASy Swiss-Prot
Match: PSK1_SCHPO (Serine/threonine-protein kinase psk1 OS=Schizosaccharomyces pombe GN=psk1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.723e-31
Identity = 83/240 (34.58%), Postives = 124/240 (51.67%), Query Frame = 1
Query:   94 MLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXX-EQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKGR-LREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLASFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLLDPNPNSR 807
            +LG G++ KV L +   TG+  A                EQ K E  +++ V+H  I  L+       ++Y  +    GGELF+ +A+ R L EDV   Y  +L  A+   H  G+ +RDLKPEN LLD +G++ +TDFGLS  +E+        +  GT  Y APE++ ++ YD A  D WS G++++ LL    PF  +N   +  KI R     P + +S+AR +I K L  NP  R
Sbjct:   96 VLGRGSYGKVLLVKQKNTGRLFAQKQLKKASIVLRAKGLEQTKNERQILEEVRHPFICRLYYAFQDHDRLYLILQYAPGGELFSHLAEQRMLPEDVVAFYTAELTLALIHLHKLGIVYRDLKPENCLLDAEGHILLTDFGLSKVAEN---GADCRSFVGTEEYCAPEILLEQPYDHA-VDWWSMGILIFDLLTGSPPFTANNHKRIMEKITRAKPNIPFYVTSDARDIINKFLKKNPKQR 331          
BLAST of DY260217 vs. ExPASy Swiss-Prot
Match: PLK1_XENTR (Serine/threonine-protein kinase PLK1 OS=Xenopus tropicalis GN=plk1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.723e-31
Identity = 81/246 (32.93%), Postives = 124/246 (50.41%), Query Frame = 1
Query:   76 KYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKGR-LREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDG-LLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLASFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLLDPNPNSR 807
            +Y  GR LG G FAK Y   +L++ +  A               +++  EI++ + + H+H+V  H        +Y  ++L +   L     + + + E  AR Y +Q I    + HS  V HRDLK  NL L+++  +K+ DFGL+   E+   DG    T CGTP Y+APEV+ KKG+   + DIWS G I+Y LL    PF+   +   Y +I + ++  P   +  A  LI K+L   P SR
Sbjct:   43 RYLRGRFLGKGGFAKCYEITDLESREVFAGKIVPKTMLLKPHQKDKMTMEIAIQRSLDHRHVVGFHGFFEDNDFVYVVLELCRRRSLLELHKRRKAVTEPEARYYLKQTILGCQYLHSNRVIHRDLKLGNLFLNDEMEVKIGDFGLATKVEY---DGERKKTLCGTPNYIAPEVLGKKGH-SFEVDIWSIGCIMYTLLVGKPPFETSCLKETYMRIKKNEYSVPKHINPMATALIQKMLRSEPTSR 284          
BLAST of DY260217 vs. ExPASy Swiss-Prot
Match: KIN1_YEAST (Serine/threonine protein kinase KIN1 OS=Saccharomyces cerevisiae GN=KIN1 PE=1 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 3.723e-31
Identity = 70/197 (35.53%), Postives = 114/197 (57.87%), Query Frame = 1
Query:  220 REISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLASFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLLDPNPNSR 807
            RE S+ +++ H HI  L E+    +  Y   + V GG+L + I + G +RE  AR + + + SA+ + H+  + HRDLK EN+++ +   +K+ DFGLS   +  KQ   LHT CG+  + APE++    Y G + D+WS GV+L+VL+   +PF D+N   ++ KI +G  + P   S E   L++K+L  +P  R
Sbjct:  193 REASLGQILYHPHICRLFEMCTLSNHFYMLFEYVSGGQLLDYIIQHGSIREHQARKFARGIASALIYLHANNIVHRDLKIENIMISDSSEIKIIDFGLSNIYDSRKQ---LHTFCGSLYFAAPELLKANPYTGPEVDVWSFGVVLFVLVCGKVPFDDENSSVLHEKIKQGKVEYPQHLSIEVISLLSKMLVVDPKRR 386          
The following BLAST results are available for this feature:
BLAST of DY260217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PRKX_MOUSE2.851e-3134.05Serine/threonine-protein kinase PRKX OS=Mus muscul... [more]
KPC1B_CAEEL2.851e-3131.95Protein kinase C-like 1B OS=Caenorhabditis elegans... [more]
CDPK1_PLAFK3.339e-3137.50Calcium-dependent protein kinase 1 OS=Plasmodium f... [more]
CDPK1_PLAF73.339e-3137.50Calcium-dependent protein kinase 1 OS=Plasmodium f... [more]
Y2070_DICDI3.723e-3134.31Probable serine/threonine-protein kinase DDB_G0277... [more]
ULK1_MOUSE3.723e-3132.59Serine/threonine-protein kinase ULK1 OS=Mus muscul... [more]
PXI_DICDI3.723e-3133.21Probable serine/threonine-protein kinase pXi OS=Di... [more]
PSK1_SCHPO3.723e-3134.58Serine/threonine-protein kinase psk1 OS=Schizosacc... [more]
PLK1_XENTR3.723e-3132.93Serine/threonine-protein kinase PLK1 OS=Xenopus tr... [more]
KIN1_YEAST3.723e-3135.53Serine/threonine protein kinase KIN1 OS=Saccharomy... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP11YL16FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260217 ID=DY260217; Name=DY260217; organism=Citrus clementina; type=EST; length=1063bp
AAAAAAGACCGCGTGGAGATGGCTACATCAAACAGTAACGGCGGAGGCGA
TGACAGGCCGACGTTGCTACATGGGAAATACGAGCTGGGGCGTATGCTAG
GCCACGGAACCTTCGCGAAGGTGTACCTGGCAAGAAATTTGCAGACGGGG
AAAAGCATGGCCATGAAAGTTGTTGGTAAAGACAAGGTTATCAAGGTGGG
CATGATGGAGCAAATCAAGCGTGAAATCTCTGTCATGAAGATGGTGAAGC
ACAAGCACATAGTTGAGCTACACGAAGTCATGGCAAGTAAGTCCAAGATT
TACTTCGCCATGGACCTCGTCAAAGGCGGCGAGCTGTTCAACAAGATTGC
CAAAGGAAGATTACGAGAAGATGTTGCAAGGGTTTATTTCCAGCAGCTGA
TTTCAGCCGTTGATTTCTGCCACAGCCGCGGCGTTTATCACCGCGACTTG
AAGCCTGAGAATCTCTTGCTAGACGAAGATGGTAACTTGAAGGTCACGGA
TTTTGGGCTGAGTGCTTTCTCTGAGCATTTGAAGCAAGATGGTCTGTTGC
ATACGACGTGTGGGACTCCAGCTTACGTTGCTCCTGAAGTCATAAGCAAG
AAAGGATACGACGGTGCCAAGGCCGATATTTGGTCTTGTGGGGTCATTCT
TTACGTGTTGTTAGCAAGTTTCTTGCCCTTCCAGGATGATAATATCGTGT
CCATGTATCGGAAGATTTACAGGGGAGATTTCAAGTGCCCGCCTTGGTTT
TCATCTGAAGCGAGGAGGTTGATCACCAAGCTTCTCGATCCCAACCCTAA
CTCCAGAAATCCCTATTTCCAAGATCCTGGAATCCTCTTGGTTCCAAAAG
TCTGCTCCCCAGGTTGTGGATACTAACCAAAAGATGAAATTTGAAGCTGA
AAAGTCATCCAAACCACCCGAAAATCCAAATGGCCTTCCTATCCATCCCC
TTTGTCGGAAGGGTTTGATTTTTCCCCCTTTTTTTGAGGGAAAAAAAAAA
ACCGGAAAAAAAAGGAACCTAAAATTTTCCACCCCCCAGGCCCCCCCAGC
CCGTGGGGACCCC
back to top