DY260220

Overview
NameDY260220
Unique NameDY260220
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1040
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10291 contig Ccv1_Contig10291:262..1300. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260220 vs. ExPASy Swiss-Prot
Match: IMPA1_MOUSE (Inositol monophosphatase 1 OS=Mus musculus GN=Impa1 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 9.918e-41
Identity = 70/156 (44.87%), Postives = 102/156 (65.38%), Query Frame = 2
Query:   62 DSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQ-VDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSL 526
            D   + +D AV  A++AGE+IR       +V  K    DLVT TD+  E ++ + +K+++P H FIGEE+ AA   T  T+ PTW +DP+DGTTNFVH FPFV +SIG  + K    G+VY+ + D+++TG  G+GAF NG+ ++VS Q ++ KSL
Sbjct:    3 DPWQECMDYAVILARQAGEMIREALKNEMDVMIKSSPADLVTVTDQKVEKMLMSSIKEKYPCHSFIGEESVAAGEKTVFTESPTWFIDPIDGTTNFVHRFPFVAVSIGFLVNKEMEFGIVYSCVEDKMYTGRKGKGAFCNGQKLQVSQQEDITKSL 158          

HSP 2 Score: 46.2098 bits (108), Expect = 9.918e-41
Identity = 27/97 (27.84%), Postives = 44/97 (45.36%), Query Frame = 3
Query:  528 LATEAGTKRDKPTLDASTNRINSLL-FKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDXXXXXXXXXXXXXXXYDPSGNDFDITPQKVAASN 815
            L TE G+ R   TL    + +  L    +  +R  G+ A+N+C +A G  D +YE+G    WD                D +G  FD+  +++ A+N
Sbjct:  159 LVTELGSSRKPETLRIVLSNMEKLCSIPIHGIRSVGTAAVNMCLVATGGADAYYEMGI-HCWDMAGAGIIVTEAGGVLMDVTGGPFDLMSRRIIAAN 254          
BLAST of DY260220 vs. ExPASy Swiss-Prot
Match: IMPA1_XENLA (Inositol monophosphatase 1 OS=Xenopus laevis GN=impa1 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.255e-37
Identity = 66/149 (44.30%), Postives = 102/149 (68.46%), Query Frame = 2
Query:   89 AVDAAKRAGEIIRNGFYQTKNVEHKGQV---DLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSL 526
            AV  A++AG ++     +  ++  K  +   DLVT TD+  E++I + +K+++P+H FIGEE+ AA   + LTD PTWI+DP+DGTTNFVH FPFV +SIG  + K    GVVY+ + D+++TG  G+G+F NG+ ++VS Q ++ KS+
Sbjct:   13 AVSIARKAGSVVCAALKEDVSIMVKTSLAPADLVTATDQKVEEMIISSIKEKYPSHSFIGEESVAAGAGSTLTDNPTWIIDPIDGTTNFVHRFPFVAVSIGFAVHKQVEFGVVYSCVEDKMYTGRKGKGSFCNGQKLQVSGQKDITKSM 161          

HSP 2 Score: 37.7354 bits (86), Expect = 1.255e-37
Identity = 23/98 (23.47%), Postives = 44/98 (44.90%), Query Frame = 3
Query:  528 LATEAGTKRDKPTLD--ASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDXXXXXXXXXXXXXXXYDPSGNDFDITPQKVAASN 815
            + TE G+ R+   +   + +N    L   +  +R  G+ A+N+C +A G  D +YE+G    WD                D +G  FD+   ++ +++
Sbjct:  162 IITELGSNRNPEFIKTVSLSNMERLLCIPIHGIRAVGTAAVNMCLVATGGADAYYEMGL-HCWDMAAASVIVTEAGGTILDATGGLFDLMSCRIISAS 258          
BLAST of DY260220 vs. ExPASy Swiss-Prot
Match: IMPA1_CAEEL (Inositol monophosphatase ttx-7 OS=Caenorhabditis elegans GN=ttx-7 PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 3.614e-37
Identity = 70/152 (46.05%), Postives = 94/152 (61.84%), Query Frame = 2
Query:   77 FLDTAVDAAKRAGEIIRNGFY--QTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSL 526
            F+D A++  K+AG ++R  F   ++K        DLVTETD+A E L+   L ++F  H+FIGEE+ A     E TD PTWI+DP+DGTTNFVH  P + I +GL I K    G+VYNPI +EL+    G+GAF NG PI+ S    L K +
Sbjct:   13 FVDYAIELVKKAGTLVRTAFDSPESKVDTKSSNTDLVTETDQAVEKLLIEGLSERFKGHRFIGEESVAGGAKIEWTDAPTWIIDPIDGTTNFVHRIPMIAICVGLAIKKQIRAGIVYNPITNELYLAQLGKGAFKNGFPIRASKNQLLSKGV 164          

HSP 2 Score: 38.891 bits (89), Expect = 3.614e-37
Identity = 30/100 (30.00%), Postives = 43/100 (43.00%), Query Frame = 3
Query:  573 ASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDXXXXXXXXXXXXXXXYDPSGNDFDITPQKV--AASNPPVKDAFMRLCHNQNEP 866
            A +N  N ++  VR  R  GS A+N+  +A G  D + E G    WD                DP+G+ FD+  +KV  A +    +D    L H   EP
Sbjct:  185 AQSNMRNQVMAGVRGHRSFGSGAINMVMVAQGSCDGYVEYGIHA-WDVAAPSIIVTEAGGVVTDPTGSPFDVMSRKVLCAGTAELGRDLSACLTHVDFEP 283          
BLAST of DY260220 vs. ExPASy Swiss-Prot
Match: IMPA1_DICDI (Inositol monophosphatase OS=Dictyostelium discoideum GN=impa1 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.560e-34
Identity = 76/168 (45.24%), Postives = 111/168 (66.07%), Query Frame = 2
Query:   56 QNDSLAKFLDTAVDAAKRAGE-IIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKS-LPRNRGWNKT 553
            +N +L ++L +AVD  K  G  I++N   ++K +E+KG +DLVT+TDKA E+ I   L  ++P  K +GEE+T   G     +EPTW++DP+DGTTNFVH FP  C+SI L+I K  +V  +Y P++DELFT   G GAF NG+ I VSS   L +S +  N G++++
Sbjct:    2 ENITLDQYLQSAVDVVKEIGPMILKNYNSRSKQIEYKGAIDLVTDTDKAVEEHIIKTLTTKYPHTKILGEESTKD-GIYNWGNEPTWVIDPIDGTTNFVHRFPLFCVSIALSINKEIVVACLYAPVLDELFTATKGGGAFLNGESISVSSVEHLSQSIISTNVGYDRS 168          
BLAST of DY260220 vs. ExPASy Swiss-Prot
Match: IMPA2_RAT (Inositol monophosphatase 2 OS=Rattus norvegicus GN=Impa2 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 5.019e-33
Identity = 72/149 (48.32%), Postives = 99/149 (66.44%), Query Frame = 2
Query:   83 DTAVDAAKRAGEIIRNGFYQTKNVEHK-GQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSL 526
            + AV  A RAG+IIR    + K+V  K    DLVTETD   EDLI + L+++FP+H+FI EE TA+     LT  PTWI+DP+DGT NFVH FP V +SIG  + +    GV+++   + L+TG  GQGAF NG+ ++VS +T+L K+L
Sbjct:   23 EVAVQLALRAGQIIRKALTEEKHVSTKTSAADLVTETDHRVEDLIVSELRKRFPSHRFIAEEATASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVHQELEFGVIHHCTEERLYTGRRGQGAFCNGQRLQVSRETDLAKAL 171          
BLAST of DY260220 vs. ExPASy Swiss-Prot
Match: IMPA2_MOUSE (Inositol monophosphatase 2 OS=Mus musculus GN=Impa2 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 6.556e-33
Identity = 72/149 (48.32%), Postives = 98/149 (65.77%), Query Frame = 2
Query:   83 DTAVDAAKRAGEIIRNGFYQTKNVEHK-GQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSL 526
            + AV  A RAG+IIR    + K V  K    DLVTETD   EDLI + L+++FP+H+FI EE TA+     LT  PTWI+DP+DGT NFVH FP V +SIG  + +    GV+++   + L+TG  GQGAF NG+ ++VS +T+L K+L
Sbjct:   23 EVAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHRVEDLIVSELRKRFPSHRFIAEEATASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVHQELEFGVIHHCTEERLYTGRRGQGAFCNGQRLQVSRETDLAKAL 171          
BLAST of DY260220 vs. ExPASy Swiss-Prot
Match: IMPA2_HUMAN (Inositol monophosphatase 2 OS=Homo sapiens GN=IMPA2 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.907e-32
Identity = 71/147 (48.30%), Postives = 96/147 (65.31%), Query Frame = 2
Query:   89 AVDAAKRAGEIIRNGFYQTKNVEHK-GQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSL 526
            AV  A RAG+IIR    + K V  K    DLVTETD   EDLI + L+++FP+H+FI EE  A+     LT  PTWI+DP+DGT NFVH FP V +SIG  + +    GV+Y+   + L+TG  G+GAF NG+ ++VS +T+L K+L
Sbjct:   23 AVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKAL 169          
BLAST of DY260220 vs. ExPASy Swiss-Prot
Match: SUHB_SYNY3 (Inositol-1-monophosphatase OS=Synechocystis sp. (strain PCC 6803) GN=suhB PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.980e-31
Identity = 66/155 (42.58%), Postives = 89/155 (57.42%), Query Frame = 2
Query:   68 LAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQV-DLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEP-TWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSL 526
            L  +L+ A +A   AG  I + + + + ++ KG+  DLVTE D+  E +I   +K++ P H  + EE+    G     D P  W +DPLDGTTNF H +P  C+SIGL I  IP VGVVYNP   ELF      GA  N +PI+VS+   L KSL
Sbjct:   14 LQTWLEIATEAVLAAGAEIFSLWGKVQQIQEKGRAGDLVTEADRQAEAIILEIIKRRCPDHAILAEES----GQLGQVDNPFCWAIDPLDGTTNFAHSYPVSCVSIGLLIQDIPTVGVVYNPFRQELFRAATSLGATLNRRPIQVSTTASLDKSL 164          

HSP 2 Score: 40.4318 bits (93), Expect = 1.980e-31
Identity = 21/50 (42.00%), Postives = 29/50 (58.00%), Query Frame = 3
Query:  564 TLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWD 713
            TLD +      L    + +R SGS A++L  +ACGRLD ++E G   PWD
Sbjct:  176 TLDNNYPEFCYLTHLTQGVRRSGSAAIDLIDVACGRLDGYWERGI-NPWD 224          
BLAST of DY260220 vs. ExPASy Swiss-Prot
Match: INM1_YEAST (Inositol monophosphatase 1 OS=Saccharomyces cerevisiae GN=INM1 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.279e-28
Identity = 72/161 (44.72%), Postives = 99/161 (61.49%), Query Frame = 2
Query:   65 SLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKG---QVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLPRNR 538
            S+ KFL     A ++ G II++     K+ + K     VD+VT  DK  E LI+  +K Q+PT KFIGEE+    G T +TD+PT+I+DP+DGTTNFVH FPF C S+GLT+ K P+VGV+YNP ++ L +   G G   N K     S+ E + SL  N+
Sbjct:    7 SIEKFLCEL--ATEKVGPIIKSKSGTQKDYDLKTGSRSVDIVTAIDKQVEKLIWESVKTQYPTFKFIGEESYVK-GETVITDDPTFIIDPIDGTTNFVHDFPFSCTSLGLTVNKEPVVGVIYNPHINLLVSASKGNGMRVNNKDYDYKSKLESMGSLILNK 164          
BLAST of DY260220 vs. ExPASy Swiss-Prot
Match: SUHB_RHILO (Inositol-1-monophosphatase OS=Rhizobium loti GN=suhB PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.447e-28
Identity = 63/152 (41.45%), Postives = 89/152 (58.55%), Query Frame = 2
Query:   80 LDTAVDAAKRAGEIIRNGFYQTKN--VEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTD-EPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSL 526
            L+  V AA +AG  +   F + +N  V  KG  D V++ D+  ED+IF  L +  P + F+ EE     GA E  D +  WIVDPLDGTTNF+HG P   +SI L      + GV+YNP MDEL+T   G GAF N + ++V+ + +LV ++
Sbjct:    7 LNVMVQAAMKAGRSLSRDFGEVQNLQVSLKGPGDYVSQADRKAEDIIFAELSKARPGYGFLMEER----GAVEGEDSQHRWIVDPLDGTTNFLHGIPLFAVSIALERQGQIVAGVIYNPAMDELYTTERGGGAFMNDRRLRVAGRIKLVDTV 154          

HSP 2 Score: 35.8094 bits (81), Expect = 5.447e-28
Identity = 22/85 (25.88%), Postives = 37/85 (43.53%), Query Frame = 3
Query:  588 INSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDXXXXXXXXXXXXXXXYDPSGNDFDITPQKVAASNPPVKDAFMR 842
            + +++ +V  +R  GS AL+L  +A GR+D F+E G    WD                D  G    +    V A N  ++ A ++
Sbjct:  174 LRNVMAEVSGVRRLGSAALDLAYVAAGRMDGFWETGLSA-WDIAAGLLLIREAGGFVSDMDGGQDMLDNGSVVAGNEVIQRALLK 257          
The following BLAST results are available for this feature:
BLAST of DY260220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
IMPA1_MOUSE9.918e-4144.87Inositol monophosphatase 1 OS=Mus musculus GN=Impa... [more]
IMPA1_XENLA1.255e-3744.30Inositol monophosphatase 1 OS=Xenopus laevis GN=im... [more]
IMPA1_CAEEL3.614e-3746.05Inositol monophosphatase ttx-7 OS=Caenorhabditis e... [more]
IMPA1_DICDI1.560e-3445.24Inositol monophosphatase OS=Dictyostelium discoide... [more]
IMPA2_RAT5.019e-3348.32Inositol monophosphatase 2 OS=Rattus norvegicus GN... [more]
IMPA2_MOUSE6.556e-3348.32Inositol monophosphatase 2 OS=Mus musculus GN=Impa... [more]
IMPA2_HUMAN1.907e-3248.30Inositol monophosphatase 2 OS=Homo sapiens GN=IMPA... [more]
SUHB_SYNY31.980e-3142.58Inositol-1-monophosphatase OS=Synechocystis sp. (s... [more]
INM1_YEAST1.279e-2844.72Inositol monophosphatase 1 OS=Saccharomyces cerevi... [more]
SUHB_RHILO5.447e-2841.45Inositol-1-monophosphatase OS=Rhizobium loti GN=su... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YL21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260220 ID=DY260220; Name=DY260220; organism=Citrus clementina; type=EST; length=1040bp
CGTTCTTCTCCTCCTTTTTTTAATCCTGTATAATAAAAAATATACCCATA
TGGCACAAAATGATTCCCTTGCAAAGTTCTTGGACACTGCAGTTGATGCA
GCTAAGAGGGCTGGCGAGATAATCCGTAATGGGTTCTATCAAACCAAAAA
TGTGGAGCATAAAGGCCAGGTGGATTTGGTCACAGAAACTGATAAAGCAT
GTGAGGATCTCATATTTAATCATCTCAAGCAGCAATTTCCCACGCATAAG
TTCATTGGAGAAGAAACTACCGCTGCTTGTGGTGCCACAGAGTTGACCGA
TGAACCCACATGGATTGTCGATCCTCTTGATGGAACAACTAACTTTGTGC
ATGGGTTTCCCTTTGTGTGTATCTCTATCGGTCTTACAATTGGAAAGATT
CCTATTGTCGGGGTTGTCTACAATCCAATAATGGATGAGCTTTTTACTGG
AGTCCATGGACAAGGTGCATTTTTTAATGGAAAACCTATAAAAGTATCAT
CTCAAACTGAACTAGTAAAGTCTCTCCCTCGCAACAGAGGCTGGAACAAA
ACGTGATAAGCCAACTCTGGATGCTTCTACAAATAGAATCAATAGCTTGC
TATTCAAGGTGAGATCCCTTCGGATGAGTGGCTCCTGTGCATTGAATCTT
TGTGGAATTGCATGCGGAAGGCTTGATCTGTTTTATGAACTCGGATTTGG
AGGTCCATGGGATGTGGCAGCTGGTGTTGTGATTGTTGAAGAAGCTGGAG
GACTTGTTTATGATCCATCCGGTAACGATTTTGATATCACCCCTCAAAAA
GTTGCAGCTTCCAACCCCCCCGTCAAGGATGCTTTTATGAGGCTTTGCCA
CAATCAAAATGAACCAGCCTTCCAAAAACTTCCCGAAATATCCTGAAAGT
TACTTATTAACCATTAAGGCCCAAAAAATTCCACTTTCCCCCAACCCCCA
AAAAAAAAAGTACCTCTTGATTCTACCCCCCCCGTAGGGGTTTAACCACA
AAACCCTTTTGTAATTATTAATTTAAAAGAAATTTTCAAA
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