DY260220

Overview
NameDY260220
Unique NameDY260220
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1040
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10291 contig Ccv1_Contig10291:262..1300. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260220 vs. ExPASy Swiss-Prot
Match: SUHB_ECOLI (Inositol-1-monophosphatase OS=Escherichia coli (strain K12) GN=suhB PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.037e-27
Identity = 60/148 (40.54%), Postives = 85/148 (57.43%), Query Frame = 2
Query:   80 LDTAVDAAKRAGEIIRNGFYQTKNVE--HKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPT-WIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTEL 514
            L+ AV AA++AG +I   +     VE   KG  D VT  DKA E +I + +++ +P H  I EE+    G  E TD+   W++DPLDGTTNF+   P   +SI + I     V VVY+P+ +ELFT   GQGA  NG  ++ S+  +L
Sbjct:    5 LNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEES----GELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDL 148          

HSP 2 Score: 40.0466 bits (92), Expect = 2.037e-27
Identity = 26/99 (26.26%), Postives = 42/99 (42.42%), Query Frame = 3
Query:  582 NRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDXXXXXXXXXXXXXXXYDPSGNDFDITPQKVAASNPPVKDAFMRLCHNQNEPAFQK 878
            N +  L  +    R +GS AL+L  +A GR+D F+E+G   PWD                D +G    +    + A NP V  A +    ++   A ++
Sbjct:  170 NIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGL-RPWDFAAGELLVREAGGIVSDFTGGHNYMLTGNIVAGNPRVVKAMLANMRDELSDALKR 267          
BLAST of DY260220 vs. ExPASy Swiss-Prot
Match: SUHB_ECOL6 (Inositol-1-monophosphatase OS=Escherichia coli O6 GN=suhB PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.037e-27
Identity = 60/148 (40.54%), Postives = 85/148 (57.43%), Query Frame = 2
Query:   80 LDTAVDAAKRAGEIIRNGFYQTKNVE--HKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPT-WIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTEL 514
            L+ AV AA++AG +I   +     VE   KG  D VT  DKA E +I + +++ +P H  I EE+    G  E TD+   W++DPLDGTTNF+   P   +SI + I     V VVY+P+ +ELFT   GQGA  NG  ++ S+  +L
Sbjct:    5 LNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEES----GELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDL 148          

HSP 2 Score: 40.0466 bits (92), Expect = 2.037e-27
Identity = 26/99 (26.26%), Postives = 42/99 (42.42%), Query Frame = 3
Query:  582 NRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDXXXXXXXXXXXXXXXYDPSGNDFDITPQKVAASNPPVKDAFMRLCHNQNEPAFQK 878
            N +  L  +    R +GS AL+L  +A GR+D F+E+G   PWD                D +G    +    + A NP V  A +    ++   A ++
Sbjct:  170 NIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGL-RPWDFAAGELLVREAGGIVSDFTGGHNYMLTGNIVAGNPRVVKAMLANMRDELSDALKR 267          
BLAST of DY260220 vs. ExPASy Swiss-Prot
Match: SUHB_ECO57 (Inositol-1-monophosphatase OS=Escherichia coli O157:H7 GN=suhB PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.037e-27
Identity = 60/148 (40.54%), Postives = 85/148 (57.43%), Query Frame = 2
Query:   80 LDTAVDAAKRAGEIIRNGFYQTKNVE--HKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPT-WIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTEL 514
            L+ AV AA++AG +I   +     VE   KG  D VT  DKA E +I + +++ +P H  I EE+    G  E TD+   W++DPLDGTTNF+   P   +SI + I     V VVY+P+ +ELFT   GQGA  NG  ++ S+  +L
Sbjct:    5 LNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEES----GELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDL 148          

HSP 2 Score: 40.0466 bits (92), Expect = 2.037e-27
Identity = 26/99 (26.26%), Postives = 42/99 (42.42%), Query Frame = 3
Query:  582 NRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDXXXXXXXXXXXXXXXYDPSGNDFDITPQKVAASNPPVKDAFMRLCHNQNEPAFQK 878
            N +  L  +    R +GS AL+L  +A GR+D F+E+G   PWD                D +G    +    + A NP V  A +    ++   A ++
Sbjct:  170 NIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGL-RPWDFAAGELLVREAGGIVSDFTGGHNYMLTGNIVAGNPRVVKAMLANMRDELSDALKR 267          
BLAST of DY260220 vs. ExPASy Swiss-Prot
Match: SUHB_SALTY (Inositol-1-monophosphatase OS=Salmonella typhimurium GN=suhB PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.494e-27
Identity = 57/147 (38.78%), Postives = 82/147 (55.78%), Query Frame = 2
Query:   80 LDTAVDAAKRAGEIIRNGFYQTKNVE--HKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTEL 514
            L  AV AA++AG +I   +     VE   KG  D VT  DKA E +I + +++ +P H  I EE+    G  +   +  W++DPLDGTTNF+   P   +SI + I     V VVY+P+ +ELFT   GQGA  NG  ++ S+  +L
Sbjct:    5 LTIAVRAARKAGNVIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEESGEHVGTDQ---DVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDL 148          

HSP 2 Score: 40.817 bits (94), Expect = 4.494e-27
Identity = 27/99 (27.27%), Postives = 42/99 (42.42%), Query Frame = 3
Query:  582 NRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDXXXXXXXXXXXXXXXYDPSGNDFDITPQKVAASNPPVKDAFMRLCHNQNEPAFQK 878
            N I  L  +    R +GS AL+L  +A GR+D F+E+G   PWD                D +G    +    + A NP V  A +    ++   A ++
Sbjct:  170 NIIGKLFTECADFRRTGSAALDLAYVAAGRVDGFFEIGL-RPWDFAAGELLVREAGGIVSDFTGGHNYMMTGNIVAGNPRVVKAMLANMRDELSDALKR 267          
BLAST of DY260220 vs. ExPASy Swiss-Prot
Match: SUHB_AQUAE (Inositol-1-monophosphatase OS=Aquifex aeolicus GN=suhB PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 5.375e-27
Identity = 63/153 (41.18%), Postives = 90/153 (58.82%), Query Frame = 2
Query:   62 DSLAKFLDTAVDAAKRAGEIIRNGFYQTK--NVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTEL 514
            ++L K+L+ A  AA   G++++  F + K  N+E KG+ D V+  DK  E+ I   + + FP H+ +GEE     GA     E  W +DPLDGT N+++GFP   +S+GL  G+ PIVG VY P  D+L+ G  G GA+ NGK IKV     L
Sbjct:    2 ENLKKYLEVAKIAALAGGQVLKENFGKVKKENIEEKGEKDFVSYVDKTSEERIKEVILKFFPDHEVVGEEM----GAEGSGSEYRWFIDPLDGTKNYINGFPIFAVSVGLVKGEEPIVGAVYLPYFDKLYWGAKGLGAYVNGKRIKVKDNESL 150          
BLAST of DY260220 vs. ExPASy Swiss-Prot
Match: SUHB_PASMU (Inositol-1-monophosphatase OS=Pasteurella multocida GN=suhB PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 5.850e-27
Identity = 59/148 (39.86%), Postives = 88/148 (59.46%), Query Frame = 2
Query:   80 LDTAVDAAKRAGEIIRNGFYQTKNVEH--KGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPT-WIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTEL 514
            L+ A+ AA++AG +I  G+ +  +++   K   D VT  DKA E+ I   +++ +P H  I EE+    GA E  D    W++DPLDGTTNFV G P   +SI + +     VGVVY+PI +ELFT V G+GA  N   ++V ++ +L
Sbjct:    5 LNIAIRAARKAGNVIAKGYERRDDLQTTLKSTNDYVTNIDKASEEAIIEVIRKSYPDHTIITEES----GALEGKDSDIQWVIDPLDGTTNFVKGLPHFSVSIAIRVKGRTEVGVVYDPIRNELFTAVRGEGAKINDMRLRVENKRDL 148          

HSP 2 Score: 36.1946 bits (82), Expect = 5.850e-27
Identity = 22/79 (27.85%), Postives = 36/79 (45.57%), Query Frame = 3
Query:  588 INSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDXXXXXXXXXXXXXXXYDPSGNDFDITPQKVAASNPPV 824
            +N+L+      R  GS AL+LC +A GR+D ++E+G    WD                D +G    +T   + A+ P +
Sbjct:  172 MNNLIQDCADFRRMGSAALDLCYVAAGRVDGYFEVGVKA-WDIAAGDLIVREAGGLVCDFNGGHSYLTSGHLVAAAPRI 249          
BLAST of DY260220 vs. ExPASy Swiss-Prot
Match: SUHB_HAEIN (Inositol-1-monophosphatase OS=Haemophilus influenzae GN=suhB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 9.912e-27
Identity = 62/152 (40.79%), Postives = 87/152 (57.24%), Query Frame = 2
Query:   80 LDTAVDAAKRAGEIIRNGFYQTKNVE--HKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPT-WIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSL 526
            L+ A+ AA++AG +I   + +   +E   KG  D VT  DKA E  I   +++ +P H  I EET    GA E  D    WI+DPLDGT NF+ G P   +SI + +     VGVVY+PI +ELFT V G+GA  N   ++V S+ E+  S+
Sbjct:    5 LNIAIRAARKAGNVIAKNYERRDAIESTQKGINDYVTNVDKASEAEIIEVIRKSYPDHTIITEET----GAIEGKDSDVQWIIDPLDGTRNFMTGLPHFSVSIAVRVKNRTEVGVVYDPIRNELFTAVRGEGAKLNEVRLRVDSKREIQGSI 152          

HSP 2 Score: 36.1946 bits (82), Expect = 9.912e-27
Identity = 22/62 (35.48%), Postives = 34/62 (54.84%), Query Frame = 3
Query:  528 LATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWD 713
            LAT    K+ K  + A    +N+L+      R +GS AL+LC +A  R+D ++E+G    WD
Sbjct:  153 LATGFPFKQPK-LMPAQFAMMNALIEDAADFRRTGSAALDLCYVASNRIDGYFEMGLKA-WD 212          
BLAST of DY260220 vs. ExPASy Swiss-Prot
Match: INM2_YEAST (Inositol monophosphatase 2 OS=Saccharomyces cerevisiae GN=INM2 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 2.043e-26
Identity = 65/139 (46.76%), Postives = 91/139 (65.47%), Query Frame = 2
Query:  170 VDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELV-KSLPRNRGWNKT**ANSGCFYK 583
            VDLVT  DK  E +I  +L  ++P+ KFIGEET    G T++T+ PT+IVDP+DGTTNF+HG+P+ C S+GL     P+VGVV+NP +++LF    G GAF N + IKVS +  ++ KSL    G ++    + G F K
Sbjct:   45 VDLVTALDKQIESIIKENLTAKYPSFKFIGEETYVK-GVTKITNGPTFIVDPIDGTTNFIHGYPYSCTSLGLAEMGKPVVGVVFNPHLNQLFHASKGNGAFLNDQEIKVSKRPLILQKSLIALEGGSERTEGSQGNFDK 182          
BLAST of DY260220 vs. ExPASy Swiss-Prot
Match: SUHB_XYLFA (Inositol-1-monophosphatase OS=Xylella fastidiosa GN=suhB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.383e-25
Identity = 49/143 (34.27%), Postives = 81/143 (56.64%), Query Frame = 2
Query:   92 VDAAKRAGEIIRNGF--YQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTEL 514
            V AA+ AG ++       +T +V  K ++D  ++ D+  E +I   LK+ +P +  +GEE     G  +      W++DPLDGT+N++ GFP  CISI L     P   V+++P+ +ELFT   G GA  N + I+V+++ +L
Sbjct:   10 VKAARSAGNVLLRHINKLETLHVIQKSRMDYASDVDEMAEKVIVKELKRAYPEYGILGEE-----GGLQGNHRIMWVIDPLDGTSNYLRGFPHYCISIALVENGEPTDAVIFDPLRNELFTASRGAGAILNERKIRVANRKDL 147          

HSP 2 Score: 41.9726 bits (97), Expect = 1.383e-25
Identity = 20/54 (37.04%), Postives = 31/54 (57.41%), Query Frame = 3
Query:  552 RDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWD 713
            R++    A    +++LL +   +R SGS AL+L  +ACGR D ++E G    WD
Sbjct:  159 RERSRAHAQLKCVDALLMQAEDIRRSGSAALDLAYVACGRADAYFEAGI-KVWD 211          
BLAST of DY260220 vs. ExPASy Swiss-Prot
Match: SUHB_XYLFT (Inositol-1-monophosphatase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=suhB PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.343e-25
Identity = 48/143 (33.57%), Postives = 81/143 (56.64%), Query Frame = 2
Query:   92 VDAAKRAGEIIRNGF--YQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTEL 514
            V AA+ AG ++       +T +V  K ++D  ++ D+  E +I   LK+ +P +  +GEE     G  +      W++DPLDGT+N++ GFP  C+SI L     P   V+++P+ +ELFT   G GA  N + I+V+++ +L
Sbjct:   10 VKAARSAGNVLLRHINKLETLHVIQKSRMDYASDVDEMAEKVIVKELKRAYPDYGILGEE-----GGLQGNHRIMWVIDPLDGTSNYLRGFPHYCVSIALVENGEPTDAVIFDPLRNELFTASRGAGAVLNERKIRVANRKDL 147          

HSP 2 Score: 41.9726 bits (97), Expect = 2.343e-25
Identity = 20/54 (37.04%), Postives = 31/54 (57.41%), Query Frame = 3
Query:  552 RDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWD 713
            R++    A    +++LL +   +R SGS AL+L  +ACGR D ++E G    WD
Sbjct:  159 RERSRAHAQLKCVDALLMQAEDIRRSGSAALDLAYVACGRADAYFEAGI-KVWD 211          
The following BLAST results are available for this feature:
BLAST of DY260220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
SUHB_ECOLI2.037e-2740.54Inositol-1-monophosphatase OS=Escherichia coli (st... [more]
SUHB_ECOL62.037e-2740.54Inositol-1-monophosphatase OS=Escherichia coli O6 ... [more]
SUHB_ECO572.037e-2740.54Inositol-1-monophosphatase OS=Escherichia coli O15... [more]
SUHB_SALTY4.494e-2738.78Inositol-1-monophosphatase OS=Salmonella typhimuri... [more]
SUHB_AQUAE5.375e-2741.18Inositol-1-monophosphatase OS=Aquifex aeolicus GN=... [more]
SUHB_PASMU5.850e-2739.86Inositol-1-monophosphatase OS=Pasteurella multocid... [more]
SUHB_HAEIN9.912e-2740.79Inositol-1-monophosphatase OS=Haemophilus influenz... [more]
INM2_YEAST2.043e-2646.76Inositol monophosphatase 2 OS=Saccharomyces cerevi... [more]
SUHB_XYLFA1.383e-2534.27Inositol-1-monophosphatase OS=Xylella fastidiosa G... [more]
SUHB_XYLFT2.343e-2533.57Inositol-1-monophosphatase OS=Xylella fastidiosa (... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YL21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260220 ID=DY260220; Name=DY260220; organism=Citrus clementina; type=EST; length=1040bp
CGTTCTTCTCCTCCTTTTTTTAATCCTGTATAATAAAAAATATACCCATA
TGGCACAAAATGATTCCCTTGCAAAGTTCTTGGACACTGCAGTTGATGCA
GCTAAGAGGGCTGGCGAGATAATCCGTAATGGGTTCTATCAAACCAAAAA
TGTGGAGCATAAAGGCCAGGTGGATTTGGTCACAGAAACTGATAAAGCAT
GTGAGGATCTCATATTTAATCATCTCAAGCAGCAATTTCCCACGCATAAG
TTCATTGGAGAAGAAACTACCGCTGCTTGTGGTGCCACAGAGTTGACCGA
TGAACCCACATGGATTGTCGATCCTCTTGATGGAACAACTAACTTTGTGC
ATGGGTTTCCCTTTGTGTGTATCTCTATCGGTCTTACAATTGGAAAGATT
CCTATTGTCGGGGTTGTCTACAATCCAATAATGGATGAGCTTTTTACTGG
AGTCCATGGACAAGGTGCATTTTTTAATGGAAAACCTATAAAAGTATCAT
CTCAAACTGAACTAGTAAAGTCTCTCCCTCGCAACAGAGGCTGGAACAAA
ACGTGATAAGCCAACTCTGGATGCTTCTACAAATAGAATCAATAGCTTGC
TATTCAAGGTGAGATCCCTTCGGATGAGTGGCTCCTGTGCATTGAATCTT
TGTGGAATTGCATGCGGAAGGCTTGATCTGTTTTATGAACTCGGATTTGG
AGGTCCATGGGATGTGGCAGCTGGTGTTGTGATTGTTGAAGAAGCTGGAG
GACTTGTTTATGATCCATCCGGTAACGATTTTGATATCACCCCTCAAAAA
GTTGCAGCTTCCAACCCCCCCGTCAAGGATGCTTTTATGAGGCTTTGCCA
CAATCAAAATGAACCAGCCTTCCAAAAACTTCCCGAAATATCCTGAAAGT
TACTTATTAACCATTAAGGCCCAAAAAATTCCACTTTCCCCCAACCCCCA
AAAAAAAAAGTACCTCTTGATTCTACCCCCCCCGTAGGGGTTTAACCACA
AAACCCTTTTGTAATTATTAATTTAAAAGAAATTTTCAAA
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