DY260221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260221 vs. ExPASy Swiss-Prot
Match: RUB3_ARATH (NEDD8-like protein RUB3 OS=Arabidopsis thaliana GN=RUB3 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.402e-16 Identity = 41/76 (53.95%), Postives = 57/76 (75.00%), Query Frame = 2 Query: 281 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYHIQKESPLHLVLRLRGG 508 M+I VKTLT K I +E+E +DTI+ +K +I++KEGIPP QR+++ GKQL D T Y++++ S LHLVL LRGG Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76 HSP 2 Score: 85.1149 bits (209), Expect = 6.960e-16 Identity = 40/76 (52.63%), Postives = 55/76 (72.37%), Query Frame = 2 Query: 53 MQIFVKTPTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 280 M+I VKT T K I +E+E +DTI+ +K +I++KEGIPP R+++ GKQL D T YN+++ S LHLVL LRGG Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76
BLAST of DY260221 vs. ExPASy Swiss-Prot
Match: RUB1_YEAST (NEDD8-like protein RUB1 OS=Saccharomyces cerevisiae GN=RUB1 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 3.124e-16 Identity = 41/76 (53.95%), Postives = 57/76 (75.00%), Query Frame = 2 Query: 281 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYHIQKESPLHLVLRLRGG 508 M + VKTLTGK I++E++ SD + ++K +++KEGIPP QQRLIF GKQ++D T+ D H+ + LHLVL LRGG Sbjct: 1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76 HSP 2 Score: 78.5666 bits (192), Expect = 6.514e-14 Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = 2 Query: 53 MQIFVKTPTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 280 M + VKT TGK I++E++ SD + ++K +++KEGIPP Q RLIF GKQ++D T+ D ++ + LHLVL LRGG Sbjct: 1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76
BLAST of DY260221 vs. ExPASy Swiss-Prot
Match: UBD_HUMAN (Ubiquitin D OS=Homo sapiens GN=UBD PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.451e-13 Identity = 48/156 (30.77%), Postives = 80/156 (51.28%), Query Frame = 2 Query: 59 IFVKTPTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL----RGGMQIFVKTL--TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYHIQKESPLHLVLRLRGG 508 + V++ +T + D++ +K ++ K +P L+ K L+ R+L+ Y I KE T+HL L++ + +F+ K L+V S ++ VKA I+ K GI P+ Q + GK+LEDG+ +ADY I+K + L L GG Sbjct: 10 VHVRSEEWDLMTFDANPYDSVKKIKEHVRSKTKVPVQDQVLLLGSKILKPRRSLSSYGIDKEKTIHLTLKVVKPSDEELPLFLVESGDEAKRHLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGNLLFLACYCIGG 165
BLAST of DY260221 vs. ExPASy Swiss-Prot
Match: UCRP_MOUSE (Ubiquitin cross-reactive protein OS=Mus musculus GN=Isg15 PE=1 SV=4) HSP 1 Score: 75.485 bits (184), Expect = 5.515e-13 Identity = 48/149 (32.21%), Postives = 76/149 (51.01%), Query Frame = 2 Query: 65 VKTPTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQPRLIFAGKQLEDGRTLADYNIQKESTLHLVLR-LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYHIQKESPLHLVLRLRGG 508 VK G + V +S T+ +K +I K G+P Q RL L+DG TL+ + ST+ LV++ + I V+ G + EV + T+D +K K+ +E + DQ L F G+ +ED L +Y ++ + + LRLRGG Sbjct: 7 VKMLGGNDFLVSVTNSMTVSELKKQIAQKIGVPAFQQRLAHQTAVLQDGLTLSSLGLGPSSTVMLVVQNCSEPLSILVRNERGHSNIYEVFLTQTVDTLKKKVSQREQVHEDQFWLSFEGRPMEDKELLGEYGLKPQCTVIKHLRLRGG 155
BLAST of DY260221 vs. ExPASy Swiss-Prot
Match: UCRP_HUMAN (Interferon-induced 17 kDa protein OS=Homo sapiens GN=ISG15 PE=1 SV=5) HSP 1 Score: 70.0922 bits (170), Expect = 2.317e-11 Identity = 49/151 (32.45%), Postives = 78/151 (51.66%), Query Frame = 2 Query: 65 VKTPTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQPRLIF--AGKQLEDGRTLADYNIQKESTLHLVL-RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYHIQKESPLHLVLRLRGG 508 VK G + + SS ++ +KA+I K G+ Q RL +G L+D LA + ST+ LV+ + + I V+ G++ T EV + T+ ++K ++ EG+ D L F GK LED L +Y ++ S + + LRLRGG Sbjct: 7 VKMLAGNEFQVSLSSSMSVSELKAQITQKIGVHAFQQRLAVHPSGVALQDRVPLASQGLGPGSTVLLVVDKCDEPLSILVRNNKGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEYGLKPLSTVFMNLRLRGG 157
BLAST of DY260221 vs. ExPASy Swiss-Prot
Match: UBD_RAT (Ubiquitin D OS=Rattus norvegicus GN=Ubd PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.741e-11 Identity = 43/154 (27.92%), Postives = 74/154 (48.05%), Query Frame = 2 Query: 65 VKTPTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL------RGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYHIQKESPLHLVLRLRGG 508 V++ +T + SD + + I+ + + L+ K L+ R L+ Y I KE+T+HL L++ + + G+ L V S ++ VK I++ +PP +Q + GK+LEDG+ +ADY+I+ S L L GG Sbjct: 8 VRSEQWPLMTFDTTMSDKVKKINEHIRSQTKVSVQDQILLLDSKILKPHRALSSYGIDKENTIHLTLKVVKPSDEELPLSLVESGDEGQRHLLRVRRSSSVAQVKEMIENVTAVPPKKQIVNCNGKRLEDGKIMADYNIKSGSLLFLTAHCIGG 161 The following BLAST results are available for this feature:
BLAST of DY260221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 96
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260221 ID=DY260221; Name=DY260221; organism=Citrus clementina; type=EST; length=1004bpback to top |