DY260225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260225 vs. ExPASy Swiss-Prot
Match: EIF3A_DANRE (Eukaryotic translation initiation factor 3 subunit A OS=Danio rerio GN=eif3a PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 2.105e-45 Identity = 84/164 (51.22%), Postives = 115/164 (70.12%), Query Frame = 1 Query: 4 LDVLYLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLLNLNKYRDQRDRPDLSSPESLQLYLDTRFEQLKVATDLPLWQEAFYSVEDIHGLMCMVKKTPKPSLLVVYY 495 LD+ L+ + PE ++LS VSGE +DR+DR L+TPW KFLWE+YR L++LRNNSK+E LY A +AF+FC QY R EFR+LC+ +R HL + ++ +Q +L++PES ++L+TR QL A + LWQEAF +VEDIHGL + KK PKP L+ YY Sbjct: 113 LDIEDLDNIQTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSKVERLYHDIAQQAFKFCLQYTRKAEFRKLCDNLRMHLGQIQRHHNQSTAINLNNPESQSMHLETRLVQLDSAISMELWQEAFKAVEDIHGLFALSKKPPKPQLMANYY 276 HSP 2 Score: 29.6462 bits (65), Expect = 2.105e-45 Identity = 11/39 (28.21%), Postives = 24/39 (61.54%), Query Frame = 2 Query: 500 KLTEIFWISSSHLYHAYAWFKLFTPPKTYNKNLSPKDLQ 616 K++ +FW S + L+H+ +L+ + KNL+ +++Q Sbjct: 278 KVSTVFWKSGNALFHSCTLHRLYHLSREMRKNLTQEEMQ 316
BLAST of DY260225 vs. ExPASy Swiss-Prot
Match: EIF3A_HUMAN (Eukaryotic translation initiation factor 3 subunit A OS=Homo sapiens GN=EIF3A PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.742e-45 Identity = 83/164 (50.61%), Postives = 115/164 (70.12%), Query Frame = 1 Query: 4 LDVLYLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLLNLNKYRDQRDRPDLSSPESLQLYLDTRFEQLKVATDLPLWQEAFYSVEDIHGLMCMVKKTPKPSLLVVYY 495 LD+ L+ + PE ++LS VSGE +DR+DR L+TPW KFLWE+YR L++LRNNS++E LY A +AF+FC QY R EFR+LC+ +R HL + ++ +Q +L++PES ++L+TR QL A + LWQEAF +VEDIHGL + KK PKP L+ YY Sbjct: 113 LDIEDLDNIQTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERLYHDIAQQAFKFCLQYTRKAEFRKLCDNLRMHLSQIQRHHNQSTAINLNNPESQSMHLETRLVQLDSAISMELWQEAFKAVEDIHGLFSLSKKPPKPQLMANYY 276 HSP 2 Score: 30.0314 bits (66), Expect = 2.742e-45 Identity = 12/39 (30.77%), Postives = 23/39 (58.97%), Query Frame = 2 Query: 500 KLTEIFWISSSHLYHAYAWFKLFTPPKTYNKNLSPKDLQ 616 K++ +FW S + L+HA +L+ + KNL+ ++Q Sbjct: 278 KVSTVFWKSGNALFHASTLHRLYHLSREMRKNLTQDEMQ 316
BLAST of DY260225 vs. ExPASy Swiss-Prot
Match: EIF3A_RAT (Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus GN=Eif3a PE=2 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 2.742e-45 Identity = 83/164 (50.61%), Postives = 115/164 (70.12%), Query Frame = 1 Query: 4 LDVLYLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLLNLNKYRDQRDRPDLSSPESLQLYLDTRFEQLKVATDLPLWQEAFYSVEDIHGLMCMVKKTPKPSLLVVYY 495 LD+ L+ + PE ++LS VSGE +DR+DR L+TPW KFLWE+YR L++LRNNS++E LY A +AF+FC QY R EFR+LC+ +R HL + ++ +Q +L++PES ++L+TR QL A + LWQEAF +VEDIHGL + KK PKP L+ YY Sbjct: 113 LDIEDLDNIQTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERLYHDIAQQAFKFCLQYTRKAEFRKLCDNLRMHLSQIQRHHNQSTAINLNNPESQSMHLETRLVQLDSAISMELWQEAFKAVEDIHGLFSLSKKPPKPQLMANYY 276 HSP 2 Score: 30.0314 bits (66), Expect = 2.742e-45 Identity = 12/39 (30.77%), Postives = 23/39 (58.97%), Query Frame = 2 Query: 500 KLTEIFWISSSHLYHAYAWFKLFTPPKTYNKNLSPKDLQ 616 K++ +FW S + L+HA +L+ + KNL+ ++Q Sbjct: 278 KVSTVFWKSGNALFHASTLHRLYHLSREMRKNLTQDEMQ 316
BLAST of DY260225 vs. ExPASy Swiss-Prot
Match: EIF3A_XENTR (Eukaryotic translation initiation factor 3 subunit A OS=Xenopus tropicalis GN=eif3a PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 3.573e-45 Identity = 83/164 (50.61%), Postives = 114/164 (69.51%), Query Frame = 1 Query: 4 LDVLYLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLLNLNKYRDQRDRPDLSSPESLQLYLDTRFEQLKVATDLPLWQEAFYSVEDIHGLMCMVKKTPKPSLLVVYY 495 LD+ L+ + PE ++LS VSGE +DR+DR L+TPW KFLWE+YR L++LRNNSK+E LY A +AF+FC Y R EFR+LC+ +R HL + ++ +Q +L++PES ++L+TR QL A + LWQEAF +VEDIHGL + KK PKP L+ YY Sbjct: 113 LDIEDLDNIQTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSKVERLYHDIAQQAFKFCLLYTRKAEFRKLCDNLRMHLSQIQRHHNQSTAINLNNPESQSMHLETRLVQLDSAISMELWQEAFKAVEDIHGLFALSKKPPKPQLMANYY 276 HSP 2 Score: 30.8018 bits (68), Expect = 3.573e-45 Identity = 12/39 (30.77%), Postives = 24/39 (61.54%), Query Frame = 2 Query: 500 KLTEIFWISSSHLYHAYAWFKLFTPPKTYNKNLSPKDLQ 616 K++ +FW S + L+HA +L+ + KNL+ +++Q Sbjct: 278 KVSTVFWKSGNTLFHASTLHRLYHLSREMRKNLTQEEMQ 316
BLAST of DY260225 vs. ExPASy Swiss-Prot
Match: EIF3A_NEMVE (Eukaryotic translation initiation factor 3 subunit A OS=Nematostella vectensis GN=v1g190699 PE=3 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 1.121e-43 Identity = 83/164 (50.61%), Postives = 120/164 (73.17%), Query Frame = 1 Query: 4 LDVLYLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLLNLNKYRDQRDRPDLSSPESLQLYLDTRFEQLKVATDLPLWQEAFYSVEDIHGLMCMVKKTPKPSLLVVYY 495 +D+ L+ + PE L+LS+VSGE +DR+DR +TPW KFLWE YR VLE+LRNN ++E LY TA +AF+FC +Y R TEFR+LC+ +RNHL K++ Q + +L++P+S+Q++L+TR QL A + LWQEAF +VED++GLM + K+ PKP ++ YY Sbjct: 121 VDIEDLDQIQTPESLLLSFVSGEDTQDRTDRVKLTPWVKFLWEAYRNVLELLRNNVRVEKLYHETAQQAFKFCLKYTRRTEFRKLCDNLRNHLNVTLKHQGQPNSVNLNNPDSIQMHLETRLAQLDSAISMELWQEAFKAVEDVYGLMQLSKRPPKPQVMANYY 284
BLAST of DY260225 vs. ExPASy Swiss-Prot
Match: EIF3A_CANAL (Eukaryotic translation initiation factor 3 subunit A OS=Candida albicans GN=TIF32 PE=3 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 7.150e-43 Identity = 80/168 (47.62%), Postives = 110/168 (65.48%), Query Frame = 1 Query: 19 LEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLLNLNKYRDQR----DRPDLSSPESLQLYLDTRFEQLKVATDLPLWQEAFYSVEDIHGLMCMVKKTPKPSLLVVYYAEANR 510 LE + PE ++LS VS DR++RELVTPW +FLWE +R VL+ILRNNSKLE Y+ ++AF+FC + R EFRRLCE++R H+ ++ + + DLS E++Q YLD RF QL +A L LWQE+F SV+D+H L+ KK PKP+++ YY R Sbjct: 155 LETAQTPESILLSAVSNTDSADRTERELVTPWLRFLWEAFRAVLDILRNNSKLEITYSAIVNQAFKFCLNFNRKAEFRRLCELLRTHMQSVTTQTTTKTSGHNAIDLSDAETVQRYLDQRFAQLNIAVKLELWQESFRSVDDVHSLITASKKAPKPNMMANYYENLAR 322 HSP 2 Score: 28.1054 bits (61), Expect = 7.150e-43 Identity = 12/22 (54.55%), Postives = 14/22 (63.64%), Query Frame = 2 Query: 503 LTEIFWISSSHLYHAYAWFKLF 568 L IF +S + LYHA AW K F Sbjct: 320 LARIFAVSDNTLYHAAAWNKFF 341
BLAST of DY260225 vs. ExPASy Swiss-Prot
Match: EIF3A_DEBHA (Eukaryotic translation initiation factor 3 subunit A OS=Debaryomyces hansenii GN=TIF32 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.501e-42 Identity = 80/167 (47.90%), Postives = 109/167 (65.27%), Query Frame = 1 Query: 19 LEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLLNLN---KYRDQRDRPDLSSPESLQLYLDTRFEQLKVATDLPLWQEAFYSVEDIHGLMCMVKKTPKPSLLVVYYAEANR 510 LEA + PE ++LS VS DR++RELV PW +FLWE R VL+ILRNNSKLE Y+ ++AFQFC ++ R EFRRLCE++R H+ ++ K + DLS E++Q YLD RF QL ++ L LWQE+F SV+D+H L+ KK P+P ++ YY R Sbjct: 127 LEAAQTPESILLSAVSNADSADRTERELVNPWLRFLWEALRAVLDILRNNSKLEVTYSAIVNQAFQFCLKFNRKAEFRRLCELLRGHMQSVTTQIKPTGSMNAIDLSDSETVQRYLDQRFAQLNISVKLELWQESFRSVDDVHTLITASKKAPRPVMMANYYENLGR 293 HSP 2 Score: 27.7202 bits (60), Expect = 3.501e-42 Identity = 12/22 (54.55%), Postives = 14/22 (63.64%), Query Frame = 2 Query: 503 LTEIFWISSSHLYHAYAWFKLF 568 L IF +S + LYHA AW K F Sbjct: 291 LGRIFAVSGNSLYHAAAWNKFF 312
BLAST of DY260225 vs. ExPASy Swiss-Prot
Match: EIF3A_CULQU (Eukaryotic translation initiation factor 3 subunit A OS=Culex quinquefasciatus GN=eIF3-S10 PE=3 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 4.550e-42 Identity = 78/164 (47.56%), Postives = 104/164 (63.41%), Query Frame = 1 Query: 4 LDVLYLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLLNLNKYRDQRDRPDLSSPESLQLYLDTRFEQLKVATDLPLWQEAFYSVEDIHGLMCMVKKTPKPSLLVVYY 495 LD+ L+ PE +++S V GE +DRSDR ++ PW KFLWE+Y LE+L+ NS E LY A AF FC +Y R EFR+LCE +R HL +++K Q +S PE+ QL LDTR QL A + LW EA+ ++EDIHGLM + KKTP P + +YY Sbjct: 115 LDIDDLDNLATPESILMSAVCGEDAQDRSDRTILLPWVKFLWESYGQCLELLKVNSHCENLYHDIAKMAFAFCLKYNRKMEFRKLCEKLRKHLDDISKVSSQTANVSISKPETQQLNLDTRLNQLDCAIQMELWLEAYKAIEDIHGLMTLSKKTPMPKTMALYY 278 HSP 2 Score: 34.2686 bits (77), Expect = 4.550e-42 Identity = 14/39 (35.90%), Postives = 24/39 (61.54%), Query Frame = 2 Query: 500 KLTEIFWISSSHLYHAYAWFKLFTPPKTYNKNLSPKDLQ 616 KL +FW + + L+HA A KLF + KN++ +++Q Sbjct: 280 KLAMVFWKAGNQLFHAAALLKLFQLSRDMKKNVTQEEIQ 318
BLAST of DY260225 vs. ExPASy Swiss-Prot
Match: EIF3A_PICGU (Eukaryotic translation initiation factor 3 subunit A OS=Pichia guilliermondii GN=TIF32 PE=3 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 4.562e-42 Identity = 80/167 (47.90%), Postives = 109/167 (65.27%), Query Frame = 1 Query: 19 LEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLLNLN---KYRDQRDRPDLSSPESLQLYLDTRFEQLKVATDLPLWQEAFYSVEDIHGLMCMVKKTPKPSLLVVYYAEANR 510 LE + PE +++S VS DR++RELVTPW +FLWE +R VL+ILRNNSK E Y+ ++AFQFC ++ R EFRRLCE++R H+ + K + DLS E++Q YLD RF QL ++ L LWQE+F SV+D+H L+ KKTPKP ++ YY R Sbjct: 127 LETSQTPESILMSAVSNTDTADRTERELVTPWLRFLWEAFRAVLDILRNNSKTEVTYSTIVNQAFQFCFRFNRKAEFRRLCELLRAHIQTVTTQPKTAGTTNAIDLSDSETIQRYLDQRFSQLNISVKLELWQESFRSVDDVHTLITASKKTPKPVMMANYYENLAR 293 HSP 2 Score: 26.5646 bits (57), Expect = 4.562e-42 Identity = 11/22 (50.00%), Postives = 14/22 (63.64%), Query Frame = 2 Query: 503 LTEIFWISSSHLYHAYAWFKLF 568 L IF +S + L+HA AW K F Sbjct: 291 LARIFAVSDNGLFHAAAWNKFF 312
BLAST of DY260225 vs. ExPASy Swiss-Prot
Match: EIF3A_AEDAE (Eukaryotic translation initiation factor 3 subunit A OS=Aedes aegypti GN=eIF3-S10 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.930e-42 Identity = 78/164 (47.56%), Postives = 104/164 (63.41%), Query Frame = 1 Query: 4 LDVLYLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLLNLNKYRDQRDRPDLSSPESLQLYLDTRFEQLKVATDLPLWQEAFYSVEDIHGLMCMVKKTPKPSLLVVYY 495 LD+ L+ PE +++S V GE +DRSDR ++ PW KFLWE+Y LE+L+ NS E LY A AF FC +Y R EFR+LCE +R HL +++K Q +S PE+ QL LDTR QL A + LW EA+ ++EDIHGLM + KKTP P + +YY Sbjct: 115 LDIDDLDNLATPESILMSAVCGEDAQDRSDRTILLPWVKFLWESYCQCLELLKVNSHCENLYHDIAKMAFGFCLKYNRKMEFRKLCEKLRKHLEDISKVSSQTANVSISKPETQQLNLDTRLNQLDCAIQMELWLEAYKAIEDIHGLMTLSKKTPMPKTMALYY 278 HSP 2 Score: 34.2686 bits (77), Expect = 5.930e-42 Identity = 14/39 (35.90%), Postives = 24/39 (61.54%), Query Frame = 2 Query: 500 KLTEIFWISSSHLYHAYAWFKLFTPPKTYNKNLSPKDLQ 616 KL +FW + + L+HA A KLF + KN++ +++Q Sbjct: 280 KLAMVFWKAGNQLFHAAALLKLFQLSRDMKKNVTQEEIQ 318 The following BLAST results are available for this feature:
BLAST of DY260225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260225 ID=DY260225; Name=DY260225; organism=Citrus clementina; type=EST; length=1065bpback to top |