DY260225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260225 vs. ExPASy Swiss-Prot
Match: EIF3A_VANPO (Eukaryotic translation initiation factor 3 subunit A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=TIF32 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 8.900e-33 Identity = 75/161 (46.58%), Postives = 99/161 (61.49%), Query Frame = 1 Query: 19 LEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHL--LNLNKYRDQRDRPDLSSPESLQLYLDTRFEQLKVATDLPLWQEAFYSVEDIHGLMCMVKKTPKPSLLVVYY 495 LE PE+L+ S ++ + E+VT W KF WE+YR VL+++RNNS+LE YA +R QFC +Y R EF+RL E++R HL N + + + DLS E+LQ YLD RF QL V+ L LW EAF S+ED++ LM M K TPK S L YY Sbjct: 122 LEGGVTPENLLKSVYIQDQSVAGFNDEVVTSWLKFTWESYRAVLDLVRNNSQLEITYAGVVNRTMQFCLKYNRKNEFKRLAEMLRQHLDAANYQQSKIGSNIVDLSDSETLQRYLDQRFLQLNVSVKLELWHEAFRSIEDVYHLMKMSKHTPKSSTLANYY 282
BLAST of DY260225 vs. ExPASy Swiss-Prot
Match: EIF3A_CRYNE (Eukaryotic translation initiation factor 3 subunit A OS=Cryptococcus neoformans GN=TIF32 PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.589e-32 Identity = 73/156 (46.79%), Postives = 101/156 (64.74%), Query Frame = 1 Query: 34 RPEDLMLS-YVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCE-IIRNHLLNLNKYRDQRDRPDLSSPESLQLYLDTRFEQLKVATDLPLWQEAFYSVEDIHGLMCMVKKTPKPSLLVVYY 495 +P LML +V ++R +R L+ P KF W++Y L+I ++N +LE +Y AHRAF FCK ++R +FRRLCE +R L N KY Q+ +LS PE+L +LDTRF QL+ A +L LWQEAF S+ED+HGL+ K T KPS++ YY Sbjct: 132 QPASLMLDCFVDSAGDRERIERRLIAPAQKFCWDSYDICLDIAKSNDRLEVIYQSIAHRAFHFCKIHQRKADFRRLCEQRLRKDLANAAKYSHQQHAINLSDPETLGRFLDTRFLQLETAVELELWQEAFRSIEDVHGLIAGRKGT-KPSMMANYY 286
BLAST of DY260225 vs. ExPASy Swiss-Prot
Match: EIF3A_YEAST (Eukaryotic translation initiation factor 3 subunit A OS=Saccharomyces cerevisiae GN=TIF32 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 3.739e-31 Identity = 66/161 (40.99%), Postives = 98/161 (60.87%), Query Frame = 1 Query: 19 LEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHL--LNLNKYRDQRDRPDLSSPESLQLYLDTRFEQLKVATDLPLWQEAFYSVEDIHGLMCMVKKTPKPSLLVVYY 495 LE PE+L++S ++ + E +T W +F WE+YR VL++LRNN+ LE Y+ + FC +Y+R EF+RL E++R HL N + + + DLS ++LQ YLD RF+Q+ V+ L LW EA+ S+ED+ LM + K+ PKPS L YY Sbjct: 123 LEGGVTPENLLISVYESDQSVAGFNDEAITSWLRFTWESYRAVLDLLRNNALLEITYSGVVKKTMHFCLKYQRKNEFKRLAEMLRQHLDAANYQQSKSGNNLVDLSDADTLQRYLDQRFQQVDVSVKLELWHEAYRSIEDVFHLMKISKRAPKPSTLANYY 283
BLAST of DY260225 vs. ExPASy Swiss-Prot
Match: EIF3A_CANGA (Eukaryotic translation initiation factor 3 subunit A OS=Candida glabrata GN=TIF32 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.219e-29 Identity = 62/161 (38.51%), Postives = 95/161 (59.01%), Query Frame = 1 Query: 19 LEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLLNLNKYRDQ--RDRPDLSSPESLQLYLDTRFEQLKVATDLPLWQEAFYSVEDIHGLMCMVKKTPKPSLLVVYY 495 LE PE+L+ S + + E + W +F WE+YRT L++LRNNS+LE Y+ R QFC +++R EF+RL E++R HL N ++ + ++ DLS ++LQ YLD RF+ + + L LW EA+ + ED++ LM M + PK S L Y+ Sbjct: 123 LEGGVTPENLLSSVYEADHSVAGFNDEALNSWMRFSWESYRTALDLLRNNSQLEITYSGVVSRTMQFCLKHQRKNEFKRLAEMLRQHLDTANYHQSKFGSNQVDLSDADTLQRYLDQRFQLVDASVKLGLWHEAYKAAEDVYHLMKMTTRKPKSSTLANYF 283 HSP 2 Score: 24.2534 bits (51), Expect = 7.219e-29 Identity = 9/22 (40.91%), Postives = 12/22 (54.55%), Query Frame = 2 Query: 503 LTEIFWISSSHLYHAYAWFKLF 568 L +IF +S + H AW K F Sbjct: 286 LVQIFLVSGDQILHTLAWKKYF 307
BLAST of DY260225 vs. ExPASy Swiss-Prot
Match: EIF3A_DICDI (Eukaryotic translation initiation factor 3 subunit A OS=Dictyostelium discoideum GN=eif3a PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 3.273e-17 Identity = 39/143 (27.27%), Postives = 75/143 (52.45%), Query Frame = 1 Query: 100 LVTPWFKFLWETYRTVLEILR-----------NNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLLNLNKYRDQRDRPDLSSPESLQLYLDTRFEQLKVATDLPLWQEAFYSVEDIHGLMCMVKKTPKPSLLVVYY 495 L+ + K+L+E Y+ ++E+L ++SK ++ + +A +C +Y+R +F L E+ R+ + L K + S +++ +++ RF QL VA L L+ A+ S+EDI+ ++ + PKP +L YY Sbjct: 136 LLFSYMKYLFEAYKAMIEVLTRQNTKFEHTKFDHSKFDSTLLKISTQALNYCSKYQRKPDFMVLTELFRSSIEQLFK---------VPSLDTVNTHIEIRFHQLTVAISLGLYLIAYKSIEDINIMLFSLLVKPKPVVLATYY 269 HSP 2 Score: 43.5134 bits (101), Expect = 3.273e-17 Identity = 17/39 (43.59%), Postives = 26/39 (66.67%), Query Frame = 2 Query: 500 KLTEIFWISSSHLYHAYAWFKLFTPPKTYNKNLSPKDLQ 616 KL +++WI+++HL HAYA +K + K YN N + D Q Sbjct: 271 KLAQVYWITNAHLLHAYALYKHYVYNKNYNMNFTQADSQ 309 The following BLAST results are available for this feature:
BLAST of DY260225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260225 ID=DY260225; Name=DY260225; organism=Citrus clementina; type=EST; length=1065bpback to top |