DY260226
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 4.626e-45 Identity = 109/268 (40.67%), Postives = 140/268 (52.24%), Query Frame = 2 Query: 98 CGSRVVCGERDTGHGTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTG--GWPDAPGGEYAWGYCYIRQVSRPASDYCY--RYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDL----PCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPLK*TPARLPGYGPTTNITHRGIQLRPRWE*TPYPTVLGSFPPFGGRLGFRPADILVATNQR 877 C C + +G G D G L +++RE F+ +L +RND CPARGFY YDAFI AAK+FPAF +G++ RKRE+AAF AQT ETTG GW AP G Y WGYCY R+++ +DYC PC QY GRGP+QLTWN NY +CG A+GVDLLNNPDL P P+ + R+PG+G TNI + G++ W +G + + LG + L NQR Sbjct: 52 CKKENGCQSQCSGSGGDTGGLDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWA-APDGPYTWGYCYNRELN--PADYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSDQ-----AAGRVPGFGLITNIINGGLECGQGWN-AKVEDRIGFYKRYCDTLGVGYGNNLDCYNQR 310
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 7.892e-45 Identity = 109/270 (40.37%), Postives = 141/270 (52.22%), Query Frame = 2 Query: 98 CGSRV-VCGE---RDTGHGTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYC--PCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDLPCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPLK*TPA-RLPGYGPTTNITHRGIQLRPRWE*TPYPTVLGSFPPFGGRLGFRPADILVATNQRP*G 886 CGS CG+ + GG L ++S + F ++L +RND C + FY YDAF+ AAKAFP F N G+ +KREIAAF QT ETTGGWP AP G YAWGYC++R+ + S YC PC QY+GRGPIQ++WN NY +CG A+GVDLLNNPDL + + T G P A RLPGYG TNI + G++ R + + +G + + G D L +QRP G Sbjct: 44 CGSTSEYCGDGCQSQCSGSSGGGTLSSLISGDTFNNMLKHRNDNACQGKPFYTYDAFLSAAKAFPNFANKGDTATKKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLRE--QNPSTYCQASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDL--VATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLEC-GRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDCYSQRPFG 308
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.758e-44 Identity = 108/267 (40.45%), Postives = 138/267 (51.69%), Query Frame = 2 Query: 95 NCGSRVVCGERDTGHGTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDL----PCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPLK*TPARLPGYGPTTNITHRGIQLRPRWE*TPYPTVLGSFPPFGGRLGFRPADILVATNQR 877 NC S+ G G GG+LG +S MF+ +L +RN+ C + FY Y+AFI AA++FP FG SG+ RKREIAAFFAQT ETTGGW AP G YAWGYC++R+ P DYC PC +Y GRGPIQ++ N NY CG A+GVDLLNNPDL P + P++ + RLPG+G TNI + G++ R +G + + LG P D L NQR Sbjct: 61 NCQSQCPGGGPGPG---PGGDLGSAISNSMFDQMLKHRNENSCQGKNFYSYNAFINAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNP-GDYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSADR-----AANRLPGFGVITNIINGGLEC-GRGTDNRVQDRIGFYRRYCSILGVTPGDNLDCVNQR 317
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.999e-44 Identity = 109/260 (41.92%), Postives = 137/260 (52.69%), Query Frame = 2 Query: 131 TGHGTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTG--GWPDAPGGEYAWGYCYIRQVSRPASDYCYR--YCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDL----PCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPLK*TPARLPGYGPTTNITHRGIQLRPRWE*TPYPTVLGSFPPFGGRLGFRPADILVATNQRP*G 886 +G G L ++SRE F +L +RND CPARGFY YDAFI AA++FPAF +G++ RKREIAAF AQT ETTG GW AP G YAWGYCY R+++ P S YC PC QY GRGP+QL+WN NY +CG A+GVDLLNNPDL P P++ + R+PGYG TNI + G++ W +G + + LG + L NQ P G Sbjct: 65 SGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELN-PPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDR-----AAGRVPGYGVITNIINGGLECGKGWN-AQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFG 316
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.095e-44 Identity = 73/167 (43.71%), Postives = 97/167 (58.08%), Query Frame = 2 Query: 86 SAQNCGSRVVCGERDTGHGTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC---YRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDL 577 +A +R G G+ + I+S +++ L +++D CPARGFY Y +F+ AA FP F +G RKRE+AAF AQ ETTGGW AP G YAWG CY +++ P S YC + PC YHGRGPIQ++WN NY G+ALG D L NP++ Sbjct: 25 AASGAEARWYGGGGGGGYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEIN-PQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEI 190 HSP 2 Score: 51.2174 bits (121), Expect = 5.095e-44 Identity = 19/33 (57.58%), Postives = 25/33 (75.76%), Query Frame = 1 Query: 604 FQSAIWFWMTAPAPKPSCHQVLTDEWKPSPLEV 702 FQ+A+WFWMT KPSCHQV+ E++P P +V Sbjct: 199 FQTALWFWMTPRDTKPSCHQVMVGEYRPGPADV 231
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 178.718 bits (452), Expect = 5.115e-44 Identity = 107/259 (41.31%), Postives = 132/259 (50.97%), Query Frame = 2 Query: 119 GERDTGHGTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVS-RPASDYCYRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDLPCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPP--LK*TPARLPGYGPTTNITHRGIQLRPRWE*TPYPTVLGSFPPFGGRLGFRPADILVATNQRP*G 886 G D G D G L I+ + F+ LL +RND RCPA GFY Y+AFI AAK FP FGN+G++ MRKREIAAF QT ETTGGWPDAP G YAWGYCY+++++ +P D Y C QY GRGPIQL+WN NY CG+ L + LL P+L + GN P R+PGYG TNI + GI+ +G + + LG L QRP G Sbjct: 76 GGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEINCQPYCDPSSNY-QCVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLLQEPEL---VETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFYKKYCDSLGTTYGSNLDCYQQRPFG 330
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.140e-43 Identity = 107/261 (41.00%), Postives = 139/261 (53.26%), Query Frame = 2 Query: 116 CGERDTGHGTDGGELGKILSREMFEDLLPYRNDVRCPARG-FYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDLPCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPP-LK*TPARLPGYGPTTNITHRGIQLRPRWE*TPYPTVLGSFPPFGGRLGFRPADILVATNQRP*G 886 C + G G+LG ++S MF+ +L +RND C +G FY Y+AFI AA +FP FG +G+ T RKREIAAFFAQT ETTGGWP AP G YAWGYC++R+ P DYC PC +Y GRGPIQ++ N NY CG A+GVDLLNNPDL + + T P + R+PG+G TNI + G++ + + +G + + G LG P D L NQR G Sbjct: 54 CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSP-GDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDL--VATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSD-SRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFG 310
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.488e-43 Identity = 103/244 (42.21%), Postives = 132/244 (54.10%), Query Frame = 2 Query: 158 LGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCY--RYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDLPCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHP-PLK*TPARLPGYGPTTNITHRGIQLRPRWE*TPYPTVLGSFPPFGGRLGFRPADILVATNQRP 880 +G I+ R++FE LL +RND CPARGFY Y+AF+ AA AFPAFG +GN RKRE+AAF QT ETTGGWP AP G ++WGYC+ +Q P SDYC PC +Y+GRGPIQL++N NY G A+GVDLL+NPDL ++ + T P P R PGYG TNI + G++ + +G + + G G L NQRP Sbjct: 89 VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCF-KQEQNPPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDL--VATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPD-DRVANRIGFYQRYCGAFGIGTGGNLDCYNQRP 328
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 4.330e-43 Identity = 108/260 (41.54%), Postives = 135/260 (51.92%), Query Frame = 2 Query: 131 TGHGTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTG--GWPDAPGGEYAWGYCYIRQVSRPASDYCYR--YCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDL----PCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPLK*TPARLPGYGPTTNITHRGIQLRPRWE*TPYPTVLGSFPPFGGRLGFRPADILVATNQRP*G 886 +G G L ++SRE F +L +RND CPARGFY YDAFI AA++FPAF +G++ RKREIAAF AQT ETTG GW AP G YAWGYCY R+++ P S YC PC QY GRGP+QL+WN NY +CG A+GVDLLNNPDL P P++ + R GYG TNI + G++ W +G + + LG + L NQ P G Sbjct: 43 SGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELN-PPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDR-----AAGRATGYGVITNIINGGLECGKGWN-AQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFG 294
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 7.386e-43 Identity = 107/261 (41.00%), Postives = 138/261 (52.87%), Query Frame = 2 Query: 140 GTDGGELGKILSREMFEDLLPYRNDVRCPARG-FYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDLPCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPL--K*TPA-------RLPGYGPTTNITHRGIQLRPRWE*TPYPTVLGSFPPFGGRLGFRPADILVATNQRP*G 886 G G+LG ++S MF+ +L +RND C +G FY Y+AFI AA +FP FG +G+ T RKREIAAFFAQT ETTGGW AP G YAWGYC++R+ P DYC PC +Y GRGPIQ++ N NY CG A+GVDLLNNPDL T P H + + P+ R+PG+G TNI + G++ + + +G + + G LG P D L NQR G Sbjct: 60 GGSPGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSP-GDYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDL----------VATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLECGHGSD-SRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFG 308 The following BLAST results are available for this feature:
BLAST of DY260226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260226 ID=DY260226; Name=DY260226; organism=Citrus clementina; type=EST; length=1079bpback to top |