DY260226
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.260e-42 Identity = 103/257 (40.08%), Postives = 137/257 (53.31%), Query Frame = 2 Query: 140 GTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCP-LPGQ-YHGRGPIQLTWNCNYLRCGEALGVDLLNNPDLPCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPL--K*TPA-------RLPGYGPTTNITHRGIQLRPRWE*TPYPTVLGSFPPFGGRLGFRPADILVATNQR 877 G G++ I+S MF+ +L +RND C + FY Y+AFI AA++F FG +G+ T RKRE+AAFFAQT ETTGGW AP G YAWGYCY+R+ P S YC + P PGQ Y+GRGPIQ+++N NY CG A+G +LLNNPDL T P H + + TP+ RLPGYG TNI + G++ + +G + + LG P D + NQ+ Sbjct: 79 GPSTGDISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPS-YCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDL----------VATNAVVSFKSAIWFWMTAQSPKPSCHDVITGRWTPSAADRAANRLPGYGVITNIINGGLECGHGSD-ARVQDRIGFYRRYCSILGVSPGDNIDCGNQK 323
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 2.149e-42 Identity = 107/269 (39.78%), Postives = 139/269 (51.67%), Query Frame = 2 Query: 116 CGERDTGHGTDGGELGKILSREMFEDLLPYRNDVRCPARG-FYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDLPCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPL--K*TPA-------RLPGYGPTTNITHRGIQLRPRWE*TPYPTVLGSFPPFGGRLGFRPADILVATNQRP*G 886 C + G G+LG ++S MF+ +L +RND C + FY Y+AFI AA +FP FG +G+ T RKREIAAF AQT ETTGGWP AP G YAWGYC++R+ P DYC PC +Y GRGPIQ++ N NY CG A+GVDLLNNPDL T P H + + P+ R+PG+G TNI + G++ + + +G + + G LG P D L NQR G Sbjct: 54 CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSP-GDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDL----------VATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSD-SRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFG 310
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 2.807e-42 Identity = 103/264 (39.02%), Postives = 137/264 (51.89%), Query Frame = 2 Query: 116 CGERDTGHGTDGGELGKILSREMFEDLLPYRNDVRCPARG-FYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDL----PCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPLK*TPARLPGYGPTTNITHRGIQLRPRWE*TPYPTVLGSFPPFGGRLGFRPADILVATNQRP*G 886 C + G G+LG ++S MF+ +L +RND C + FY Y+AF+ AA +FP FG +G+ T RKREIAAF AQT ETTGGWP AP G YAWGYC++R+ P DYC PC +Y GRGPIQ++ N NY CG A+GVDLLNNPDL P + P+ + R+PG+G TNI + G++ + + +G + + G LG P + L NQR G Sbjct: 58 CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSP-GDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQ-----AANRVPGFGVITNIINGGLECGHGSD-SRVQDRIGFYRRYCGILGVSPGENLDCGNQRSFG 314
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 4.788e-42 Identity = 93/216 (43.06%), Postives = 121/216 (56.02%), Query Frame = 2 Query: 134 GHGTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYC--PCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDL----PCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPLK*TPARLPGYGPTTNITHRGIQ 763 G G GG + ++S+E+FE LL +RND CPARGFY YDA + AA AFP F +G++ RKRE+AAF QT ETTGGW AP G Y+WGYC+ ++ AS YC PC +Y GRGPIQL++N NY GEA+G DLLNNP+L P + P++G+ R+PGYG TNI + G++ Sbjct: 78 GGGGGGGAVEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATAS-YCVPSAEWPCAPDKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDI-----AAGRVPGYGVITNIINGGLE 287
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.251e-41 Identity = 72/148 (48.65%), Postives = 96/148 (64.86%), Query Frame = 2 Query: 140 GTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGV--DLLNNPDL 577 GT G I++RE+FE +L +RN+ CPA+GFY YDAFI AA +FP FG +G++T RK+EIAAFF QT ET GG G + GYC+++Q+ + SD +Y+GRGPIQLT NY R G+ +GV +L+NNPDL Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQ--SD------------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDL 150 HSP 2 Score: 50.8322 bits (120), Expect = 2.251e-41 Identity = 19/34 (55.88%), Postives = 24/34 (70.59%), Query Frame = 1 Query: 592 PVPIFQSAIWFWMTAPAPKPSCHQVLTDEWKPSP 693 P+ F++AIWFWMT KPSCH V+ +W PSP Sbjct: 155 PIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSP 188
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.179e-40 Identity = 91/233 (39.06%), Postives = 121/233 (51.93%), Query Frame = 2 Query: 83 GSAQNCGSRVVCGERDTGHGTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVS-RPASDYCYR--YCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDL---PCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPLK*TPARLPGYGPTTNITHRGIQ 763 G C G G G + I+SR +F+ +L +RND CPA+ FY YDAF+ AA AFP+F +G+ RKRE+AAF AQT ETTGGW AP G Y+WGYC+ + + SDYC + PC +Y+GRGPIQ+++N NY G+A+G +LL+NPDL T NGN R+PGYG TNI + G++ Sbjct: 54 GCQSQCSGSCGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGNDQ----AAGRVPGYGVVTNIINGGVE 282
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 3.431e-40 Identity = 85/211 (40.28%), Postives = 118/211 (55.92%), Query Frame = 2 Query: 143 TDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDL----PCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPLK*TPARLPGYGPTTNITHRGIQ 763 T GG++G+++ +F+ +L YRND RC GFY YDAFI AA++F FG +G++ +K+E+AAF AQT ETTGGWP AP G YAWGYC++ + + + PC +Y+GRGPIQLT N NY G+A+ DL+NNPDL P + P+ + + R+PGYG TNI + GI+ Sbjct: 75 TGGGDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPKDWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADS-----SAGRVPGYGVITNIINGGIE 280
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 3.431e-40 Identity = 102/271 (37.64%), Postives = 137/271 (50.55%), Query Frame = 2 Query: 116 CGERDTGHGTDGGE-LGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDLPCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPL--K*TPA-------RLPGYGPTTNITHRGIQLRPRWE*TPYPTVLGSFPPFGGRLGFRPADILVATNQRP*GPN 892 CG T + GG + I+S +F+ +L +RND C A+GFY YDAF+ AA A+P F +G+ KRE+AAF AQT ETTGGWP AP G Y+WGYC+ + + A YC PC +Y+GRGPIQ+T+N NY G+A+G DLLNNPDL T P H + + TP+ R+PGYG TNI + G++ + +G + + LG D L NQRP P+ Sbjct: 61 CGGGPTPPSSGGGSGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDL----------VASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGAD-DKVADRIGFYKRYCDMLGVSYGDNLDCYNQRPYPPS 320
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.304e-39 Identity = 96/246 (39.02%), Postives = 130/246 (52.85%), Query Frame = 2 Query: 158 LGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDLPCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPLK*T-PARLPGYGPTTNITHRGIQLRPRWE*TPYPTVLGSFPPFGGRLGFRPADILVATNQRP*G 886 + ++S+ +FE +L +RND C A+GFY Y+AFI A K F AFG +G+ R +EIAAF AQT ETTGGW AP G Y+WGYCY R+ P DYC + PC +Y GRGPIQ+++N NY G A+GV+LLNNPDL + + T P + + P R+PG+G TNI + G++ +G + + LG P + L NQRP G Sbjct: 5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSP-GDYCASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDL--VANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSN-ALMDNRIGFYRRYCQILGVDPGNNLDCANQRPFG 246
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.304e-39 Identity = 99/253 (39.13%), Postives = 129/253 (50.99%), Query Frame = 2 Query: 140 GTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDL----PCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPLK*TPARLPGYGPTTNITHRGIQLRPRWE*TPYPTVLGSFPPFGGRLGFRPADILVATNQRP 880 GT G + I+S F+ +L +RND C A+GFY YDAF+ AA AFP FG +G+ RKR++AAF AQT ETTGGW AP G +AWGYC+ +Q A+DYC PC +Y+GRGPIQL+ N NY G A+GVDLL NPDL P K P+ + R PG+G TNI + G++ + + +G + + LG D L NQRP Sbjct: 19 GTAHGSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCF-KQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADR-----AAGRAPGFGVITNIINGGLEC-GHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRP 264 The following BLAST results are available for this feature:
BLAST of DY260226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260226 ID=DY260226; Name=DY260226; organism=Citrus clementina; type=EST; length=1079bpback to top |