DY260226
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 6.471e-39 Identity = 92/216 (42.59%), Postives = 119/216 (55.09%), Query Frame = 2 Query: 149 GGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDLPCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPL--K*TPA-------RLPGYGPTTNITHRGIQ 763 GG + I+SR +F+ +L +RND C A+GFY YDAF+ AA AFP FG +G+ RKRE+AAF AQT ETTGGW AP G +AWGYC+ +Q S+YC PC Y+GRGPIQL+ N NY G A+GVDLL NPDL T P +H + + +P+ R+PG+G TNI + GI+ Sbjct: 77 GGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCF-KQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDL----------VATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIE 281
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 160.229 bits (404), Expect = 1.883e-38 Identity = 98/247 (39.68%), Postives = 128/247 (51.82%), Query Frame = 2 Query: 98 CGSRVVCGE----RDTGHG----------TDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDLPCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPL--K*TPA-------RLPGYGPTTNITHRGIQ 763 CGS CG+ + +G G + GG + I+SR +F+ +L +RND C A+GFY YDAF+ AA AF FG +G RKRE+AAF AQT ETTGGW AP G +AWGYC+ +Q S+YC PC Y+GRGPIQL+ N NY G A+GVDLL NPDL T P +H + + +P+ R+PG+G TNI + GI+ Sbjct: 43 CGSTPYCGDGCQSQCSGCGGGSTPVTPTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCF-KQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDL----------VATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIE 278
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 4.194e-38 Identity = 93/231 (40.26%), Postives = 121/231 (52.38%), Query Frame = 2 Query: 86 SAQNCGSRVVCGERDTGHGTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPAS-DYCYRYC--PCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDLPCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPLK*TPA-RLPGYGPTTNITHRGIQ 763 SA CG G G+ G + I+SR +F+ +L +RND CPA FY YDAF+ AA AFP F +G + KRE+AAF AQT ETTGGW AP G YAWGYC+ + A DYC + PC +Y+GRGPIQL++N NY G+A+G DLL +PDL + ++ T P A R+PGYG TNI + G++ Sbjct: 61 SAAGCGG----GGPTPPSGSGGSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDL--VASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLE 285
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.813e-37 Identity = 70/140 (50.00%), Postives = 90/140 (64.29%), Query Frame = 2 Query: 158 LGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDL 577 +G I++ ++F ++L RND RCPA GFY YDAFI AA +FP FG SG++T R++EIAAFF QT ETTGG A + GYC++RQ SD +Y+GRGPIQLT NY + G A+ DL+NNPDL Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ--NDQSD------------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDL 150 HSP 2 Score: 41.5874 bits (96), Expect = 6.813e-37 Identity = 16/29 (55.17%), Postives = 19/29 (65.52%), Query Frame = 1 Query: 604 FQSAIWFWMTAPAPKPSCHQVLTDEWKPS 690 F++AIWFWMT KPS H V+ W PS Sbjct: 159 FKTAIWFWMTPQDNKPSSHDVIIGSWTPS 187
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 4.340e-35 Identity = 83/204 (40.69%), Postives = 107/204 (52.45%), Query Frame = 2 Query: 158 LGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDL----PCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPLK*TPARLPGYGPTTNITHRG 757 +G I++R MFE +L +R D C FY YDAFI+AA FP FG +GN+ R+RE+AAFF QT ETTGGW AP G +AWGYC + +++ P Y+GRGPIQLT NY G+ALG+DL+NNPDL P + P+ + + RLPGYG TNI + G Sbjct: 27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEIT-------------PSDPPYYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDR-----SSGRLPGYGMATNIINGG 211
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.813e-34 Identity = 83/209 (39.71%), Postives = 106/209 (50.72%), Query Frame = 2 Query: 149 GGELG--KILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYC--PCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDLPCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPLK*TPARLPGYGPTTNITHRGIQ 763 GG G +++ + FE +LP+R+D CPARGFY Y AF+ AA AFPAF +G+ RKRE+AAF AQT T+ GG Y+WGYCY ++V SD+C PC YH RGP+Q+ +N NY GEA+G DLL NP+L + P R PGYG TTNI G+Q Sbjct: 92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQ 292
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.813e-34 Identity = 83/209 (39.71%), Postives = 106/209 (50.72%), Query Frame = 2 Query: 149 GGELG--KILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYC--PCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDLPCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPLK*TPARLPGYGPTTNITHRGIQ 763 GG G +++ + FE +LP+R+D CPARGFY Y AF+ AA AFPAF +G+ RKRE+AAF AQT T+ GG Y+WGYCY ++V SD+C PC YH RGP+Q+ +N NY GEA+G DLL NP+L + P R PGYG TTNI G+Q Sbjct: 92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQ 292
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 8.185e-34 Identity = 96/257 (37.35%), Postives = 133/257 (51.75%), Query Frame = 2 Query: 140 GTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGV--DLLNNPDLPCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPLK*TPA-------RLPGYGPTTNITHRGIQ--LRPRWE*TPYPTVLGSFPPFGGRLGFRPADILVATNQR 877 GT G I++RE+FE +L +RN+ CPA+GFY YDAFI AA +FP FG +G++T RK+EIAAFF QT ET GG G + GYC++RQ+ + SD +Y+GRGPIQLT NY R G+ +GV DL+NNPDL A + P+ N + TP+ R+PGYG TNI + G++ + P T + +G + + G L + L NQ+ Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQ--SD------------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDL--------VATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPN---TAVESRIGFYRRYCGMLNVPTGENLDCNNQK 248
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 5.306e-33 Identity = 86/221 (38.91%), Postives = 117/221 (52.94%), Query Frame = 2 Query: 140 GTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDLPCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPL------K*TPA-------RLPGYGPTTNITHRGIQ 763 G+ ++G I++ ++F ++L RND RCPA+GFY YDAFI AA +FP FG +G++T RK+EIAAFF QT ETTGG A G +A GYC++R+ ++ S ++GRGPIQLT NY G+A+G DL+NNPDL + GN P + TP+ R PGYG TNI + GI+ Sbjct: 13 GSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVREGNQMGSG-------------FYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFW--------------MTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIE 205
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 2.229e-31 Identity = 84/209 (40.19%), Postives = 112/209 (53.59%), Query Frame = 2 Query: 140 GTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDLPCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPLK*TPA-RLPGYGPTTNITHRGIQ 763 GT +G I++ ++F+ +L RND RC A FY YDAFI AA +FP FG +G++T RK+EIAAFF QT ETTGG +P G YA GYC++R+ ++ + Y+GRGPIQLT NY G+A+ DL+NNPDL + + T P T A R+PGYG TNI + GI+ Sbjct: 20 GTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLREGNQ-------------MGNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDL--VATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIE 212 The following BLAST results are available for this feature:
BLAST of DY260226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260226 ID=DY260226; Name=DY260226; organism=Citrus clementina; type=EST; length=1079bpback to top |