DY260226
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 8.471e-31 Identity = 90/247 (36.44%), Postives = 125/247 (50.61%), Query Frame = 2 Query: 158 LGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDLPCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPLK*TPA-------RLPGYGPTTNITHRGIQLRPRWE*TPYPTVLGSFPPFGGRLGFRPADILVATNQR 877 +G I++ ++F ++L RND RCPA GFY YDAFI AA +FP FG +G++T R++EIAAFF QT ETTGG A + GYC++RQ SD +Y+GRGPIQLT NY + G A+G +L+NNPDL + P++ + + TP+ R+PGYG TNI + GI+ +G + + G L P + L NQR Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ--NDQSD------------RYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDL--------VATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRN-DAVEDRIGYYRRYCGMLNVAPGENLDCYNQR 248
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.887e-30 Identity = 80/216 (37.04%), Postives = 110/216 (50.93%), Query Frame = 2 Query: 158 LGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDLPCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPL------K*TPA-------RLPGYGPTTNITHRGIQ 763 +G ++++ +F +LP R++ +CPARGFY YDAFI AA +FPAFG SG + +RE+AAFF QT ETTGG ++ WGYC+ ++++ S Y+GRGPIQLT NY G ALG+DL+ NPDL + GN P + TP+ R+PGYG TNI + GI+ Sbjct: 32 VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGG-TRGSSDQFQWGYCFKEEINKATSP------------PYYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFW--------------MTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIE 220
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 115.931 bits (289), Expect = 5.193e-30 Identity = 60/150 (40.00%), Postives = 87/150 (58.00%), Query Frame = 2 Query: 131 TGHGTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRY-CPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDL 577 +G+ T +++ +F+ + +R D CP++GFY Y +F+ AA++FPAFG G+ RKRE+AAF A T+G D +AWG C+I + +D+C PC +Y RGPIQLT N NY G+A+G DL+ NPDL Sbjct: 121 SGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVE-NPHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDL 267 HSP 2 Score: 36.5798 bits (83), Expect = 5.193e-30 Identity = 12/26 (46.15%), Postives = 19/26 (73.08%), Query Frame = 1 Query: 592 PVPIFQSAIWFWMTAPAPKPSCHQVL 669 P+ F++A+WFWM+ KPSCH ++ Sbjct: 272 PIISFKTALWFWMSQHDNKPSCHDIV 297
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 7.171e-30 Identity = 62/136 (45.59%), Postives = 84/136 (61.76%), Query Frame = 2 Query: 173 SREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPD 574 + MFE +LP RN+ CP +GFY YDA+ A + +P FG +G++ RKRE+AAFFAQT ET+G + WGYC + +++ P SDYC P Y+GRGP+QL WN NY CG LG +LL+ P+ Sbjct: 68 TESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELN-PNSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNYGECGNYLGQNLLDEPE 202
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 6.070e-29 Identity = 86/252 (34.13%), Postives = 110/252 (43.65%), Query Frame = 2 Query: 134 GHGTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDLPCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPLK*TPA-RLPGYGPTTNITHRGIQLRPRWE*TPYPTVLGSFPPFGGRLGFRPADILVATNQRP*G 886 G G G L I+ MF+D+L YRND +CPA GFY Y+AFI AAK FP FGN+G++ MRKREIAAF QT ET G WP A G +Y WGYC++ N NY CG+ L + LL P+L + ++ T P + A R+PGYG TNI + GI+ +G + + LG L QRP G Sbjct: 77 GGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHM---------------------------------NYNYGLCGDDLNLPLLQEPEL--VETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYCDSLGTTYGSNLDCYQQRPFG 293
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 9.692e-27 Identity = 79/211 (37.44%), Postives = 103/211 (48.82%), Query Frame = 2 Query: 158 LGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDLPCXXXXXXXXXXXXXXXXXXXXXXXXATKSLPTNGNHPPL--K*TPA-------RLPGYGPTTNITHRGIQ 763 + ++S +FE +L +R GFY YDAFI AAK+FPAF +G+ +RKRE+AAF AQT ETTGGWP AP G Y G SD Y GRGPIQ+++N NY G+A+GVDLL NPDL T P +H + + +P+ R+PGYG TNI G++ Sbjct: 1 VSSVISSSLFEKMLLHR--------GFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPYELG---------STSD-------------YFGRGPIQISYNYNYGAAGKAIGVDLLRNPDL----------VTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVE 171
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.880e-22 Identity = 59/162 (36.42%), Postives = 85/162 (52.47%), Query Frame = 2 Query: 98 CGSRVVCGERDTGHGTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC---YRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPD 574 CG+ G D T+ + I++ E F L+ +D C A+GFY DAF+ AA +P+FG +G+ KREIAAFFA ET +CYI ++ P+ +YC PC Y+GRGP+Q++WN NY G+++G D L +PD Sbjct: 49 CGTGCQAGPCDVP-ATNDVSVASIVTPEFFAALVAQADD-GCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPD 195 HSP 2 Score: 23.8682 bits (50), Expect = 1.880e-22 Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 592 PVPIFQSAIWFW 627 PV FQ+A+W+W Sbjct: 201 PVLAFQTALWYW 212
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 6.134e-20 Identity = 59/167 (35.33%), Postives = 82/167 (49.10%), Query Frame = 2 Query: 98 CGSRVVCGERDTGHGTD----GGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC---YRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDL 577 CG+ G + GT GG +G I+++ F ++ C + FY D+FI AA FP F NS + +REIA FA ET +CYI +++ + DYC R PC Y GRGPIQL+WN NY CG++L ++LL P+L Sbjct: 48 CGTGCRSGPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGG-GCAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHETGH-------------FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPEL 196 HSP 2 Score: 24.6386 bits (52), Expect = 6.134e-20 Identity = 7/18 (38.89%), Postives = 11/18 (61.11%), Query Frame = 1 Query: 592 PVPIFQSAIWFWMTAPAP 645 P F++ +WFWM + P Sbjct: 201 PTVAFRTGLWFWMNSVRP 218
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.478e-19 Identity = 55/152 (36.18%), Postives = 75/152 (49.34%), Query Frame = 2 Query: 134 GHGTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASD-YCYR----YCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPD 574 G G G + I+S+ F+ ++ + CP + FY AF+ A P FGN G+ KREIAAFFA ETT C+I + D YC + PC +Y+GRGP+QL+WN NY G+A+G D L NP+ Sbjct: 79 GTGGGGSSVSDIVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTN-------------LCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPE 214 HSP 2 Score: 24.2534 bits (51), Expect = 8.478e-19 Identity = 7/10 (70.00%), Postives = 10/10 (100.00%), Query Frame = 1 Query: 604 FQSAIWFWMT 633 F++A+WFWMT Sbjct: 224 FKAAMWFWMT 233
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.436e-18 Identity = 50/154 (32.47%), Postives = 75/154 (48.70%), Query Frame = 2 Query: 119 GERDTGHGTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC---YRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNP 571 G G G G + +++ F + C + FY AF+ A K +P F + G++ KREIAAFFA ET +CYI ++++ ++ YC R PC +Y+GRGP+Q++WN NY G A+G D L +P Sbjct: 56 GRGGGGSGGGGANVASVVTSSFFNGIKNQAGS-GCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHET-------------GHFCYISEINK-SNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDP 194 HSP 2 Score: 24.2534 bits (51), Expect = 1.436e-18 Identity = 19/74 (25.68%), Postives = 31/74 (41.89%), Query Frame = 1 Query: 595 VPIFQSAIWFWMTAPAPKPSCHQVL------TDEWKPSPLEVNPRPPSRIRSHHQYYPPWNSIAAQVGMNAVPH 798 V F++A+WFWM S H V+ T LE P+++ + YY Q+G++ P+ Sbjct: 202 VVAFKAALWFWMN------SVHGVVPQGFGATTRAMQRALECGGNNPAQMNARVGYY---RQYCRQLGVDPGPN 266 The following BLAST results are available for this feature:
BLAST of DY260226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260226 ID=DY260226; Name=DY260226; organism=Citrus clementina; type=EST; length=1079bpback to top |