DY260226
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 4.115e-18 Identity = 56/156 (35.90%), Postives = 79/156 (50.64%), Query Frame = 2 Query: 116 CGERDTGHGTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCY--RYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPDL 577 C + G GT + I+++E F D + + CP + FY F+EA A+P FG + RKREIAA+FA ET CYI + A++YC + PC +Y GRGP+QL+WN NY+ G+ L D LN+PD+ Sbjct: 34 CWDPCEGDGTL--TVSDIVTQE-FWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHET-------------GHLCYIEERDGHANNYCQESQQYPCNPNKEYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDI 173 HSP 2 Score: 21.9422 bits (45), Expect = 4.115e-18 Identity = 5/13 (38.46%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 592 PVPIFQSAIWFWM 630 P+ F++++WFW+ Sbjct: 178 PIISFKTSLWFWI 190
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 9.013e-18 Identity = 50/167 (29.94%), Postives = 73/167 (43.71%), Query Frame = 2 Query: 83 GSAQNCGSRVVCGERDTGHGTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC---YRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPD 574 G G G G G + + E F + + + C + FY +F+ AA+++ F N KREIAAFFA ET CYI +++ DYC + PC +Y+GRGP+Q++WN NY G+ +G D L +PD Sbjct: 58 GPCWGSGGEAAAGMAGRKAGAGAGVSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPD 211 HSP 2 Score: 29.261 bits (64), Expect = 9.013e-18 Identity = 16/58 (27.59%), Postives = 27/58 (46.55%), Query Frame = 1 Query: 592 PVPIFQSAIWFWMTAPAPKPSCHQVLTDEWKPS------PLEVNPRPPSRIRSHHQYY 747 P F++A+WFWM + HQV++ + + LE N + P + + YY Sbjct: 217 PTISFKTALWFWMN------NVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYY 268
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.359e-17 Identity = 48/150 (32.00%), Postives = 74/150 (49.33%), Query Frame = 2 Query: 134 GHGTDGGELGKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC---YRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPD 574 G G+ G + +++ F + C + FY AF+ A A+P F + G E KREIAAFFA ET +CYI ++++ ++ YC R PC +Y+GRGP+Q++WN NY G +G + L +P+ Sbjct: 72 GGGSGGANVANVVTDAFFNGIKNQAGS-GCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHET-------------GHFCYISEINK-SNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPN 206 HSP 2 Score: 23.8682 bits (50), Expect = 7.359e-17 Identity = 14/54 (25.93%), Postives = 25/54 (46.30%), Query Frame = 1 Query: 604 FQSAIWFWMTAPAPKPSCHQVLTDEWKPS------PLEVNPRPPSRIRSHHQYY 747 F++A+WFWM + H V+ + + LE N P+++ + YY Sbjct: 216 FKTALWFWMN------NVHGVMPQGFGATIRAINGALECNGNNPAQMNARVGYY 263
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.560e-17 Identity = 42/121 (34.71%), Postives = 60/121 (49.59%), Query Frame = 2 Query: 221 CPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC---YRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPD 574 C + FY +F+ AA ++ F KREIAAFFA ET CYI +++ + DYC + PC +Y+GRGP+Q++WN NY G+ +G D L +PD Sbjct: 107 CAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHETGH-------------MCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPD 214 HSP 2 Score: 28.4906 bits (62), Expect = 9.560e-17 Identity = 16/58 (27.59%), Postives = 26/58 (44.83%), Query Frame = 1 Query: 592 PVPIFQSAIWFWMTAPAPKPSCHQVLTDEWKPS------PLEVNPRPPSRIRSHHQYY 747 P F++A+WFWM + HQV+ + + LE N + P + + YY Sbjct: 220 PTISFKTALWFWMN------NVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYY 271
BLAST of DY260226 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.104e-16 Identity = 62/189 (32.80%), Postives = 80/189 (42.33%), Query Frame = 2 Query: 86 SAQNCG-SRVVC---------GERDTGHGTDGGEL------------GKILSREMFEDLLPYRNDVRCPARGFYPYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC----YRYCPCPLPGQYHGRGPIQLTWNCNYLRCGEALGVDLLNNPD 574 SAQNCG + +C GE G G G IL+ + ++ + D C + FY DAF+ A ++ FG G+E KREIAA FA ET +CYI ++ + DYC PC YHGRGPIQL+WN NY G A D L P+ Sbjct: 22 SAQNCGCAEGLCCSQYGYCGTGEDYCGTGCQQGPCTTASPPPSNNVNADILTADFLNGIID-QADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHETGH-------------FCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPE 196 HSP 2 Score: 23.483 bits (49), Expect = 2.104e-16 Identity = 12/48 (25.00%), Postives = 22/48 (45.83%), Query Frame = 1 Query: 604 FQSAIWFWMTAPAPKPSCHQVLTDEWKPSPLEVNPRPPSRIRSHHQYY 747 F++A+W+WM P + T LE + P+ +++ YY Sbjct: 206 FKTALWYWMQHVRPVINQGFGATIRAINGALECDGANPTTVQARVNYY 253 The following BLAST results are available for this feature:
BLAST of DY260226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260226 ID=DY260226; Name=DY260226; organism=Citrus clementina; type=EST; length=1079bpback to top |