DY260228
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260228 vs. ExPASy Swiss-Prot
Match: NLTP3_BRANA (Non-specific lipid-transfer protein 3 OS=Brassica napus GN=LTP3 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.970e-20 Identity = 50/116 (43.10%), Postives = 73/116 (62.93%), Query Frame = 2 Query: 32 LVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 379 LV LVL C++ + ++T A ++C TV +L+ CI Y++ G V T CC+GV +L N AR+T DRQ C CL A + + + AAGLP CG+NIPY+IS +T+C+ V+ Sbjct: 4 LVKLSCLVLACMIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANAL--PTINVARAAGLPKACGVNIPYKISKTTNCNSVK 117
BLAST of DY260228 vs. ExPASy Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.970e-20 Identity = 52/113 (46.02%), Postives = 70/113 (61.95%), Query Frame = 2 Query: 50 LVLVCLMGSAFVS----TKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 376 LVLV L+ + ++ T A ++C V + +SPC+SY G + CC+GVR+L +AA +TADR+T C CLK IS G AA +P KCG++IPY ISPS DCS V Sbjct: 6 LVLVALVAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAATTTADRRTACNCLKNVAGSIS--GLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116
BLAST of DY260228 vs. ExPASy Swiss-Prot
Match: NLTP2_TOBAC (Non-specific lipid-transfer protein 2 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.878e-20 Identity = 48/93 (51.61%), Postives = 65/93 (69.89%), Query Frame = 2 Query: 101 VTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 379 ++C V + L+PC+ Y+ G + + CC GV+ L AA+S +DR+T CTCLK A + I +G AAGLPG CG+NIPY+ISPSTDCS+VQ Sbjct: 25 LSCGQVQSGLAPCLPYLQGRGPLGS-CCGGVKGLLGAAKSLSDRKTACTCLKSAANAIK--GIDMGKAAGLPGACGVNIPYKISPSTDCSKVQ 114
BLAST of DY260228 vs. ExPASy Swiss-Prot
Match: NLTP_SPIOL (Non-specific lipid-transfer protein OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 5.065e-20 Identity = 51/108 (47.22%), Postives = 71/108 (65.74%), Query Frame = 2 Query: 53 VLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 376 VL+C++ +A + +A +TC V + L+PCI Y+ GG + CC G++ L AA +T DR+T C CLK A + I Y G AAGLPG CG++IPY ISPST+C+ V Sbjct: 13 VLLCIVVAAPYA-EAGITCGMVSSKLAPCIGYLK-GGPLGGGCCGGIKALNAAAATTPDRKTACNCLKSAANAIKGINY--GKAAGLPGMCGVHIPYAISPSTNCNAV 116
BLAST of DY260228 vs. ExPASy Swiss-Prot
Match: NLTPB_BRAOT (Non-specific lipid-transfer protein B OS=Brassica oleracea var. italica GN=WAX9B PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 6.616e-20 Identity = 50/116 (43.10%), Postives = 70/116 (60.34%), Query Frame = 2 Query: 32 LVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 379 LV LVL C++ + ++T A ++C TV +L+ CI Y++ G + CC GV L N AR+T DRQ C CL A + S+ AAGLP CG+NIPY+IS ST+C+ V+ Sbjct: 4 LVKLSCLVLACMIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAAN--SFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of DY260228 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUPE (Non-specific lipid-transfer protein 1 OS=Prunus persica PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 6.616e-20 Identity = 49/96 (51.04%), Postives = 64/96 (66.67%), Query Frame = 2 Query: 101 VTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQ---AVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 379 +TC V + L+PCI YV GGAV CCNG+R + N AR+T DRQ C CLKQ +V G++ AA LPGKCG++IPY+IS ST+C+ V+ Sbjct: 1 ITCGQVSSALAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNN-----AAALPGKCGVHIPYKISASTNCATVK 91
BLAST of DY260228 vs. ExPASy Swiss-Prot
Match: NLTP2_BRANA (Non-specific lipid-transfer protein 2 OS=Brassica napus GN=LTP2 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 8.640e-20 Identity = 51/119 (42.86%), Postives = 72/119 (60.50%), Query Frame = 2 Query: 23 LMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 379 LMKL LVL C++ + +++ A ++C TV ++PCI Y++ G + CC GV L N AR+T DRQ C CL A + S+ AAGLP CG+NIPY+IS ST+C+ V+ Sbjct: 4 LMKLAC---LVLACMIVAGPITSNAALSCGTVSGYVAPCIGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAAN--SFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of DY260228 vs. ExPASy Swiss-Prot
Match: NLTP1_SORBI (Non-specific lipid-transfer protein 1 OS=Sorghum bicolor GN=LTP1 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 8.640e-20 Identity = 53/125 (42.40%), Postives = 77/125 (61.60%), Query Frame = 2 Query: 5 MASFVMLMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYV-SYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 376 MA + + +V ++VL A +++A ++C V + ++ C+SY G A + CC+GVR+L +AAR+TADR+ C CLK A GIS G AA +P KCG+++PY IS STDCSRV Sbjct: 1 MARLAVAIAVVAAVVVVL------AATTSEAAISCGQVSSAIALCLSYARGQGFAPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGIS--GLNAGNAASIPSKCGVSVPYTISTSTDCSRV 117
BLAST of DY260228 vs. ExPASy Swiss-Prot
Match: NLTP_DAUCA (Non-specific lipid-transfer protein OS=Daucus carota GN=EP2 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.474e-19 Identity = 48/99 (48.48%), Postives = 64/99 (64.65%), Query Frame = 2 Query: 86 STKAQVTCRTVVNDLSPCISYV--SYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 376 + +A +TC V L+PC+ Y+ V CCN VR L NAAR+T D++T C CLKQ + + T L AAGLP +CG+NIPY+ISP+TDC+RV Sbjct: 23 NAEAVLTCGQVTGALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAARTTLDKRTACGCLKQTANAV--TGLNLNAAAGLPARCGVNIPYKISPTTDCNRV 119
BLAST of DY260228 vs. ExPASy Swiss-Prot
Match: NLTP1_BRANA (Non-specific lipid-transfer protein 1 OS=Brassica napus GN=LTP1 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.474e-19 Identity = 49/116 (42.24%), Postives = 70/116 (60.34%), Query Frame = 2 Query: 32 LVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 379 LV LVL C++ + ++T A ++C TV +L+ CI Y++ G + CC GV L N AR+T DRQ C CL A + ++ AAGLP CG+NIPY+IS ST+C+ V+ Sbjct: 4 LVKLSCLVLACMIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAAN--AFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117 The following BLAST results are available for this feature:
BLAST of DY260228 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260228 ID=DY260228; Name=DY260228; organism=Citrus clementina; type=EST; length=1066bpback to top |