DY260234

Overview
NameDY260234
Unique NameDY260234
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1119
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1A_MOUSE (Casein kinase I isoform alpha OS=Mus musculus GN=Csnk1a1 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 1.154e-38
Identity = 74/105 (70.48%), Postives = 86/105 (81.90%), Query Frame = 2
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILK 316
            QSR  D+ESLGYVLMYF R SLPWQGLKA TKKQKY+KISEKKM TP+EVLCK +P+EF  Y +YCR LRFE+ PDY YL++LFR LF    +Q+DY FDWT+LK
Sbjct:  198 QSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302          
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1A_HUMAN (Casein kinase I isoform alpha OS=Homo sapiens GN=CSNK1A1 PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 1.154e-38
Identity = 74/105 (70.48%), Postives = 86/105 (81.90%), Query Frame = 2
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILK 316
            QSR  D+ESLGYVLMYF R SLPWQGLKA TKKQKY+KISEKKM TP+EVLCK +P+EF  Y +YCR LRFE+ PDY YL++LFR LF    +Q+DY FDWT+LK
Sbjct:  198 QSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302          
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1A_CHICK (Casein kinase I isoform alpha OS=Gallus gallus GN=CSNK1A1 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.154e-38
Identity = 74/105 (70.48%), Postives = 86/105 (81.90%), Query Frame = 2
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILK 316
            QSR  D+ESLGYVLMYF R SLPWQGLKA TKKQKY+KISEKKM TP+EVLCK +P+EF  Y +YCR LRFE+ PDY YL++LFR LF    +Q+DY FDWT+LK
Sbjct:  198 QSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302          
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1A_BOVIN (Casein kinase I isoform alpha OS=Bos taurus GN=CSNK1A1 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.154e-38
Identity = 74/105 (70.48%), Postives = 86/105 (81.90%), Query Frame = 2
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILK 316
            QSR  D+ESLGYVLMYF R SLPWQGLKA TKKQKY+KISEKKM TP+EVLCK +P+EF  Y +YCR LRFE+ PDY YL++LFR LF    +Q+DY FDWT+LK
Sbjct:  198 QSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302          
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1_PLAYO (Casein kinase I OS=Plasmodium yoelii yoelii GN=CK1 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.968e-38
Identity = 71/102 (69.61%), Postives = 88/102 (86.27%), Query Frame = 2
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWT 307
            QSR  D+E+LGYVLMYFLRGSLPWQGLKA +KK KYDKI EKK+ T +EVLC++   EF +Y +YCRSLRFED+PDY+YL+RL +DLFIREG+ +D++FDWT
Sbjct:  190 QSRRDDIEALGYVLMYFLRGSLPWQGLKAISKKDKYDKIMEKKISTSVEVLCRNTSFEFVTYLNYCRSLRFEDRPDYTYLRRLLKDLFIREGFTYDFLFDWT 291          
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1_PLAF7 (Casein kinase I OS=Plasmodium falciparum (isolate 3D7) GN=CK1 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.968e-38
Identity = 71/102 (69.61%), Postives = 88/102 (86.27%), Query Frame = 2
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWT 307
            QSR  D+E+LGYVLMYFLRGSLPWQGLKA +KK KYDKI EKK+ T +EVLC++   EF +Y +YCRSLRFED+PDY+YL+RL +DLFIREG+ +D++FDWT
Sbjct:  190 QSRRDDIEALGYVLMYFLRGSLPWQGLKAISKKDKYDKIMEKKISTSVEVLCRNASFEFVTYLNYCRSLRFEDRPDYTYLRRLLKDLFIREGFTYDFLFDWT 291          
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1_PLAF4 (Casein kinase I OS=Plasmodium falciparum (isolate Dd2) GN=CK1 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.968e-38
Identity = 71/102 (69.61%), Postives = 88/102 (86.27%), Query Frame = 2
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWT 307
            QSR  D+E+LGYVLMYFLRGSLPWQGLKA +KK KYDKI EKK+ T +EVLC++   EF +Y +YCRSLRFED+PDY+YL+RL +DLFIREG+ +D++FDWT
Sbjct:  190 QSRRDDIEALGYVLMYFLRGSLPWQGLKAISKKDKYDKIMEKKISTSVEVLCRNASFEFVTYLNYCRSLRFEDRPDYTYLRRLLKDLFIREGFTYDFLFDWT 291          
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1A_DROME (Casein kinase I isoform alpha OS=Drosophila melanogaster GN=CkIalpha PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.968e-38
Identity = 72/105 (68.57%), Postives = 89/105 (84.76%), Query Frame = 2
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILK 316
            QSR  D+ESLGYV+MYF RG LPWQG+KA TK+QKY+KISEKKM TPIEVLCK  P+EF+ Y +YCRSLRFE++PDY YL++LFR LF    +Q+DY++DWT+LK
Sbjct:  201 QSRRDDMESLGYVMMYFNRGVLPWQGMKANTKQQKYEKISEKKMSTPIEVLCKGSPAEFSMYLNYCRSLRFEEQPDYMYLRQLFRILFRTLNHQYDYIYDWTMLK 305          
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1AL_HUMAN (Casein kinase I isoform alpha-like OS=Homo sapiens GN=CSNK1A1L PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 9.767e-38
Identity = 72/105 (68.57%), Postives = 85/105 (80.95%), Query Frame = 2
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILK 316
            QSR  D+ESLGYV MYF R SLPWQGL+A TKKQKY+KISEKKM TP+EVLCK +P+EF  Y +YCR LRFE+ PDY YL++LFR LF    +Q+DY FDWT+LK
Sbjct:  198 QSRRDDMESLGYVFMYFNRTSLPWQGLRAMTKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEVPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302          
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: HHP2_SCHPO (Casein kinase I homolog hhp2 OS=Schizosaccharomyces pombe GN=hhp2 PE=2 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 3.711e-37
Identity = 71/106 (66.98%), Postives = 86/106 (81.13%), Query Frame = 2
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKY 319
            QSR  DLESLGYVL+YF RGSLPWQGL+A TK+QKY +I + K+ TP+EVLCK  P EF +Y  Y R L F +KP+Y+YL++LFRDL IR+GYQ+DYVFDW ILKY
Sbjct:  191 QSRRDDLESLGYVLLYFCRGSLPWQGLQADTKEQKYQRIRDTKIGTPLEVLCKGLPEEFITYMCYTRQLSFTEKPNYAYLRKLFRDLLIRKGYQYDYVFDWMILKY 296          
The following BLAST results are available for this feature:
BLAST of DY260234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
KC1A_MOUSE1.154e-3870.48Casein kinase I isoform alpha OS=Mus musculus GN=C... [more]
KC1A_HUMAN1.154e-3870.48Casein kinase I isoform alpha OS=Homo sapiens GN=C... [more]
KC1A_CHICK1.154e-3870.48Casein kinase I isoform alpha OS=Gallus gallus GN=... [more]
KC1A_BOVIN1.154e-3870.48Casein kinase I isoform alpha OS=Bos taurus GN=CSN... [more]
KC1_PLAYO1.968e-3869.61Casein kinase I OS=Plasmodium yoelii yoelii GN=CK1... [more]
KC1_PLAF71.968e-3869.61Casein kinase I OS=Plasmodium falciparum (isolate ... [more]
KC1_PLAF41.968e-3869.61Casein kinase I OS=Plasmodium falciparum (isolate ... [more]
KC1A_DROME1.968e-3868.57Casein kinase I isoform alpha OS=Drosophila melano... [more]
KC1AL_HUMAN9.767e-3868.57Casein kinase I isoform alpha-like OS=Homo sapiens... [more]
HHP2_SCHPO3.711e-3766.98Casein kinase I homolog hhp2 OS=Schizosaccharomyce... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YM20FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260234 ID=DY260234; Name=DY260234; organism=Citrus clementina; type=EST; length=1119bp
GCAAAGCAGAACATATGATCTGGAATCTCTTGGATATGTGCTTATGTATT
TTCTCAGGGGAAGTCTTCCCTGGCAGGGATTGAAAGCCCGTACCAAAAAG
CAGAAATATGACAAGATTAGTGAAAAGAAGATGCTTACTCCTATTGAGGT
CCTTTGCAAATCTTATCCTTCAGAATTCACATCATACTTCCACTATTGCC
GGTCATTGCGGTTTGAAGATAAACCAGATTATTCATACTTGAAAAGGCTT
TTCCGCGATCTGTTTATACGAGAAGGTTATCAGTTCGACTATGTTTTTGA
TTGGACTATATTGAAGTATCCGCAGACGGGCTCCAGTTCAAGATCACGAC
CAAGCGGGAAACCAAATTTGAACCCTGCAGGACCATCAGCTGAAAGAGTA
GAGAGGCCTTCAGGACAAGAGGTTCGAGATAGATTCGCTGGTGGAATTGA
GGCCTTTGCAAGACGGAATACATCTGGTCATGGTCTGCATGGTGATCACT
CAAGGCACAAATCTTCAGATGATGTGCCATCATCAAAGGATGTGCAACCT
GATTCAGAAAGGCCTCGCTCCTTGTCTCGAAACAGTAGTTCTTTAAAGAG
GGCTATCATGTCAGGTGGCCGACCAAGCTCATCTGGTGACCATAGTGATA
ATCGGGTCCAGCAGACTGGTCCTCGGCCTCCGGCGTGGTCGTTCTGTCTA
CTACCCCAAAGGGCTCACCTGGGTATGAATCCAATCATCCTCCCTTCCCC
CGTGGTGCAACCCCCAAAATTGGCCCTGATGGAGCCCCTCCGAACTTTAA
CCCCCCCGACATTGGTTTCAGGAAAAAGAAAAAAACCACCAAACTACCGG
GGAAAAGGGATTTTTCCCCCCCAAAAAAAAAAATTTTCTTTGTTTCCTCC
CACCCCAAACCCCCCGCCCCGAAAAGGTTTTCCCCCCTTTTTTTATTGGG
GCACCCTATTTGGGCCCCCCCCCCCCGGCCCCCCCCCCCCCCAAAACCAA
AAAAAACCTCTTGGACTTTTTTCCGGGGATTTCTCCCCTTTTTCTTACCC
GCCCCCCCCCCCCCAAAAAGAAAAAAAACCAAAAGAAGAATTTTTCCCCC
CCCAGGGAATTTTTTTTCC
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