DY260234

Overview
NameDY260234
Unique NameDY260234
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1119
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1_DICDI (Casein kinase I OS=Dictyostelium discoideum GN=cak1-1 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 4.103e-36
Identity = 66/105 (62.86%), Postives = 87/105 (82.86%), Query Frame = 2
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILK 316
            QSR  DLESLGYVLMYF RGSLPWQGLKA TK+ KY+KI +KK  T I+ LC+ +PSEF ++ +Y R L+FEDKPD+ YL++L R++F+REGY++DY+FDW I++
Sbjct:  190 QSRRDDLESLGYVLMYFNRGSLPWQGLKAYTKRDKYEKICDKKAQTKIDTLCQGFPSEFATFLNYTRFLKFEDKPDFLYLRKLLREMFVREGYRYDYMFDWVIVR 294          
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1A_CAEEL (Casein kinase I isoform alpha OS=Caenorhabditis elegans GN=kin-19 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 6.999e-36
Identity = 70/105 (66.67%), Postives = 83/105 (79.05%), Query Frame = 2
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILK 316
            QSR  D+ESLGYVLMYF RG+LPWQGLKA TKKQKY+KISEKKM T +E LCK +P+EF  Y  Y R LRF++ PDY YL++LFR LF    +Q+DY FDWT+LK
Sbjct:  197 QSRRDDMESLGYVLMYFNRGTLPWQGLKAATKKQKYEKISEKKMTTSVEHLCKGFPAEFPMYLSYTRGLRFDESPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 301          
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: DCO_DROME (Discs overgrown protein kinase OS=Drosophila melanogaster GN=dco PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 1.194e-35
Identity = 66/106 (62.26%), Postives = 86/106 (81.13%), Query Frame = 2
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKY 319
            QSR  DLESLGYVLMYF  G+LPWQGLKA  K+QKY++ISEKK+ T I VLCK +PSEF +Y ++CR + F+ +PDY +L++LFR+LF R G+ +DYVFDW +LK+
Sbjct:  190 QSRRDDLESLGYVLMYFNLGALPWQGLKAANKRQKYERISEKKLSTSIVVLCKGFPSEFVNYLNFCRQMHFDQRPDYCHLRKLFRNLFHRLGFTYDYVFDWNLLKF 295          
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1B_BOVIN (Casein kinase I isoform beta OS=Bos taurus GN=CSNK1B PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.941e-34
Identity = 68/105 (64.76%), Postives = 79/105 (75.24%), Query Frame = 2
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILK 316
            QSR  D+ES+GYVLMYF RGSLPWQGLKA T KQK +KISE KM TP++VLCK +P EF  Y  YC  L FE+ PDY YL++LFR LF +  YQ DY FDW +LK
Sbjct:  198 QSRRDDMESIGYVLMYFNRGSLPWQGLKAATLKQKCEKISEMKMTTPVDVLCKGFPIEFAMYLKYCLRLSFEEAPDYRYLRQLFRLLFRKLSYQHDYAFDWIVLK 302          
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: HRR25_YEAST (Casein kinase I homolog HRR25 OS=Saccharomyces cerevisiae GN=HRR25 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 6.551e-34
Identity = 65/106 (61.32%), Postives = 82/106 (77.36%), Query Frame = 2
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKY 319
            QSR  DLESLGYVL+YF +GSLPWQGLKA TKKQKYD+I EKK+   +E LC   P EF  Y  YC++L+F++KPDY +L RLF+DL I+  Y  D++FDWT+L+Y
Sbjct:  190 QSRRDDLESLGYVLIYFCKGSLPWQGLKATTKKQKYDRIMEKKLNVSVETLCSGLPLEFQEYMAYCKNLKFDEKPDYLFLARLFKDLSIKLEYHNDHLFDWTMLRY 295          
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KIN20_CAEEL (Casein kinase I isoform delta OS=Caenorhabditis elegans GN=kin-20 PE=2 SV=3)

HSP 1 Score: 144.05 bits (362), Expect = 1.459e-33
Identity = 65/106 (61.32%), Postives = 80/106 (75.47%), Query Frame = 2
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKY 319
            QSR  D+ESLGYV MYF RG+LPWQGLKA TK+QKY+ ISEKK+ T ++ LC  YP  F  Y +YCRSL FE++PDY YL+ LFR LF R+ + +DYVFDW   K+
Sbjct:  371 QSRRDDIESLGYVFMYFNRGTLPWQGLKAVTKRQKYELISEKKISTRVDDLCAGYPEAFAQYLNYCRSLGFEEQPDYGYLRNLFRTLFHRQQFCYDYVFDWNTYKF 476          
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1G3_RAT (Casein kinase I isoform gamma-3 OS=Rattus norvegicus GN=Csnk1g3 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 3.595e-32
Identity = 62/101 (61.39%), Postives = 77/101 (76.24%), Query Frame = 2
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDW 304
            QSR  DLE+LG++ MYFLRGSLPWQGLKA T K++Y KI + K  TPIEVLC+++P E  +Y  Y R L F +KPDY YL++LF DLF R+GY FDY +DW
Sbjct:  226 QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 326          
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1G3_PONAB (Casein kinase I isoform gamma-3 OS=Pongo abelii GN=CSNK1G3 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 3.595e-32
Identity = 62/101 (61.39%), Postives = 77/101 (76.24%), Query Frame = 2
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDW 304
            QSR  DLE+LG++ MYFLRGSLPWQGLKA T K++Y KI + K  TPIEVLC+++P E  +Y  Y R L F +KPDY YL++LF DLF R+GY FDY +DW
Sbjct:  226 QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 326          
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1G3_MOUSE (Casein kinase I isoform gamma-3 OS=Mus musculus GN=Csnk1g3 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 3.595e-32
Identity = 62/101 (61.39%), Postives = 77/101 (76.24%), Query Frame = 2
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDW 304
            QSR  DLE+LG++ MYFLRGSLPWQGLKA T K++Y KI + K  TPIEVLC+++P E  +Y  Y R L F +KPDY YL++LF DLF R+GY FDY +DW
Sbjct:  226 QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 326          
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1G2_RAT (Casein kinase I isoform gamma-2 OS=Rattus norvegicus GN=Csnk1g2 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 3.595e-32
Identity = 63/101 (62.38%), Postives = 76/101 (75.25%), Query Frame = 2
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDW 304
            QSR  DLE+LG++ MYFLRGSLPWQGLKA T K++Y KI + K  TPIEVLC+S+P E  +Y  Y R L F +KPDY YL++LF DLF R GY FDY +DW
Sbjct:  229 QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCESFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRSGYVFDYEYDW 329          
The following BLAST results are available for this feature:
BLAST of DY260234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
KC1_DICDI4.103e-3662.86Casein kinase I OS=Dictyostelium discoideum GN=cak... [more]
KC1A_CAEEL6.999e-3666.67Casein kinase I isoform alpha OS=Caenorhabditis el... [more]
DCO_DROME1.194e-3562.26Discs overgrown protein kinase OS=Drosophila melan... [more]
KC1B_BOVIN2.941e-3464.76Casein kinase I isoform beta OS=Bos taurus GN=CSNK... [more]
HRR25_YEAST6.551e-3461.32Casein kinase I homolog HRR25 OS=Saccharomyces cer... [more]
KIN20_CAEEL1.459e-3361.32Casein kinase I isoform delta OS=Caenorhabditis el... [more]
KC1G3_RAT3.595e-3261.39Casein kinase I isoform gamma-3 OS=Rattus norvegic... [more]
KC1G3_PONAB3.595e-3261.39Casein kinase I isoform gamma-3 OS=Pongo abelii GN... [more]
KC1G3_MOUSE3.595e-3261.39Casein kinase I isoform gamma-3 OS=Mus musculus GN... [more]
KC1G2_RAT3.595e-3262.38Casein kinase I isoform gamma-2 OS=Rattus norvegic... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YM20FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260234 ID=DY260234; Name=DY260234; organism=Citrus clementina; type=EST; length=1119bp
GCAAAGCAGAACATATGATCTGGAATCTCTTGGATATGTGCTTATGTATT
TTCTCAGGGGAAGTCTTCCCTGGCAGGGATTGAAAGCCCGTACCAAAAAG
CAGAAATATGACAAGATTAGTGAAAAGAAGATGCTTACTCCTATTGAGGT
CCTTTGCAAATCTTATCCTTCAGAATTCACATCATACTTCCACTATTGCC
GGTCATTGCGGTTTGAAGATAAACCAGATTATTCATACTTGAAAAGGCTT
TTCCGCGATCTGTTTATACGAGAAGGTTATCAGTTCGACTATGTTTTTGA
TTGGACTATATTGAAGTATCCGCAGACGGGCTCCAGTTCAAGATCACGAC
CAAGCGGGAAACCAAATTTGAACCCTGCAGGACCATCAGCTGAAAGAGTA
GAGAGGCCTTCAGGACAAGAGGTTCGAGATAGATTCGCTGGTGGAATTGA
GGCCTTTGCAAGACGGAATACATCTGGTCATGGTCTGCATGGTGATCACT
CAAGGCACAAATCTTCAGATGATGTGCCATCATCAAAGGATGTGCAACCT
GATTCAGAAAGGCCTCGCTCCTTGTCTCGAAACAGTAGTTCTTTAAAGAG
GGCTATCATGTCAGGTGGCCGACCAAGCTCATCTGGTGACCATAGTGATA
ATCGGGTCCAGCAGACTGGTCCTCGGCCTCCGGCGTGGTCGTTCTGTCTA
CTACCCCAAAGGGCTCACCTGGGTATGAATCCAATCATCCTCCCTTCCCC
CGTGGTGCAACCCCCAAAATTGGCCCTGATGGAGCCCCTCCGAACTTTAA
CCCCCCCGACATTGGTTTCAGGAAAAAGAAAAAAACCACCAAACTACCGG
GGAAAAGGGATTTTTCCCCCCCAAAAAAAAAAATTTTCTTTGTTTCCTCC
CACCCCAAACCCCCCGCCCCGAAAAGGTTTTCCCCCCTTTTTTTATTGGG
GCACCCTATTTGGGCCCCCCCCCCCCGGCCCCCCCCCCCCCCAAAACCAA
AAAAAACCTCTTGGACTTTTTTCCGGGGATTTCTCCCCTTTTTCTTACCC
GCCCCCCCCCCCCCAAAAAGAAAAAAAACCAAAAGAAGAATTTTTCCCCC
CCCAGGGAATTTTTTTTCC
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