DY260234

Overview
NameDY260234
Unique NameDY260234
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1119
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1G2_MOUSE (Casein kinase I isoform gamma-2 OS=Mus musculus GN=Csnk1g2 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 3.595e-32
Identity = 63/101 (62.38%), Postives = 76/101 (75.25%), Query Frame = 2 
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDW 304
            QSR  DLE+LG++ MYFLRGSLPWQGLKA T K++Y KI + K  TPIEVLC+S+P E  +Y  Y R L F +KPDY YL++LF DLF R GY FDY +DW
Sbjct:  229 QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCESFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRSGYVFDYEYDW 329
[Close]
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1G1_BOVIN (Casein kinase I isoform gamma-1 OS=Bos taurus GN=CSNK1G1 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.046e-31
Identity = 62/101 (61.39%), Postives = 76/101 (75.25%), Query Frame = 2 
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDW 304
            QSR  DLE+LG++ MYFLRGSLPWQGLKA T K++Y KI + K  TPIEVLC+++P E  +Y  Y R L F +KPDY YL+ LF DLF R+GY FDY +DW
Sbjct:  227 QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIEVLCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFERKGYTFDYAYDW 327
[Close]
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1G2_HUMAN (Casein kinase I isoform gamma-2 OS=Homo sapiens GN=CSNK1G2 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.330e-31
Identity = 61/101 (60.40%), Postives = 76/101 (75.25%), Query Frame = 2 
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDW 304
            QSR  DLE+LG++ MYFLRGSLPWQGLKA T K++Y KI + K  TPIEVLC+++P E  +Y  Y R L F +KPDY YL++LF DLF R G+ FDY +DW
Sbjct:  229 QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRSGFVFDYEYDW 329
[Close]
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1G1_RAT (Casein kinase I isoform gamma-1 OS=Rattus norvegicus GN=Csnk1g1 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.330e-31
Identity = 61/101 (60.40%), Postives = 75/101 (74.26%), Query Frame = 2 
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDW 304
            QSR  DLE+LG++ MYFLRGSLPWQGLKA T K++Y KI + K  TPIE LC+++P E  +Y  Y R L F +KPDY YL+ LF DLF R+GY FDY +DW
Sbjct:  228 QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRSTPIEALCENFPEEMMTYLRYVRRLDFFEKPDYEYLRNLFTDLFERKGYTFDYAYDW 328
[Close]
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1G1_MOUSE (Casein kinase I isoform gamma-1 OS=Mus musculus GN=Csnk1g1 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 3.043e-31
Identity = 61/101 (60.40%), Postives = 75/101 (74.26%), Query Frame = 2 
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDW 304
            QSR  DLE+LG++ MYFLRGSLPWQGLKA T K++Y KI + K  TPIE LC+++P E  +Y  Y R L F +KPDY YL+ LF DLF R+GY FDY +DW
Sbjct:  228 QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIEALCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFERKGYTFDYAYDW 328
[Close]
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1G1_DANRE (Casein kinase I isoform gamma-1 OS=Danio rerio GN=csnk1g1 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 3.043e-31
Identity = 62/107 (57.94%), Postives = 78/107 (72.90%), Query Frame = 2 
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYP 322
            QSR  DLE+LG++ MYFLRGSLPWQGLKA T K++Y KI + K  TPIEVLC+++P E  +Y  Y R L F +KPDY YL+ LF +LF R+GY FDY +DW   + P
Sbjct:  227 QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIEVLCENFPEEMATYLRYVRRLDFFEKPDYDYLRNLFTELFDRKGYAFDYSYDWVGRQIP 333
[Close]
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1G1_MACFA (Casein kinase I isoform gamma-1 OS=Macaca fascicularis GN=CSNK1G1 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 6.780e-31
Identity = 60/101 (59.41%), Postives = 75/101 (74.26%), Query Frame = 2 
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDW 304
            QSR  DLE+LG++ MYFLRGSLPWQGLKA T K++Y KI + K  TPIE LC+++P E  +Y  Y R L F +KPDY YL+ LF DLF ++GY FDY +DW
Sbjct:  228 QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIEALCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFEKKGYTFDYAYDW 328
[Close]
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1G1_HUMAN (Casein kinase I isoform gamma-1 OS=Homo sapiens GN=CSNK1G1 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 6.780e-31
Identity = 60/101 (59.41%), Postives = 75/101 (74.26%), Query Frame = 2 
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDW 304
            QSR  DLE+LG++ MYFLRGSLPWQGLKA T K++Y KI + K  TPIE LC+++P E  +Y  Y R L F +KPDY YL+ LF DLF ++GY FDY +DW
Sbjct:  228 QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIEALCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFEKKGYTFDYAYDW 328
[Close]
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1G3_HUMAN (Casein kinase I isoform gamma-3 OS=Homo sapiens GN=CSNK1G3 PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 8.854e-31
Identity = 62/101 (61.39%), Postives = 77/101 (76.24%), Query Frame = 2 
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDW 304
            QSR  DLE+LG++ MYFLRGSLPWQGLKA T K++Y KI + K  TPIEVLC+++P E  +Y  Y R L F +KPDY YL++LF DLF R+GY FDY +DW
Sbjct:  226 QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 325
[Close]
BLAST of DY260234 vs. ExPASy Swiss-Prot
Match: KC1G1_XENLA (Casein kinase I isoform gamma-1 OS=Xenopus laevis GN=csnk1g1 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.510e-30
Identity = 60/101 (59.41%), Postives = 76/101 (75.25%), Query Frame = 2 
Query:    2 QSRTYDLESLGYVLMYFLRGSLPWQGLKARTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDW 304
            QSR  DLE+LG++ MYFLRGSLPWQGLKA T K++Y KI + K  TP+EVLC+++P E  +Y  Y R L F +KPDY YL+ LF +LF R+GY FD V+DW
Sbjct:  228 QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPVEVLCENFPEEMATYLRYVRRLDFFEKPDYDYLRTLFSELFERKGYTFDCVYDW 328
The following BLAST results are available for this feature:
BLAST of DY260234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
KC1G2_MOUSE3.595e-3262.38Casein kinase I isoform gamma-2 OS=Mus musculus GN... [more]
KC1G1_BOVIN1.046e-3161.39Casein kinase I isoform gamma-1 OS=Bos taurus GN=C... [more]
KC1G2_HUMAN2.330e-3160.40Casein kinase I isoform gamma-2 OS=Homo sapiens GN... [more]
KC1G1_RAT2.330e-3160.40Casein kinase I isoform gamma-1 OS=Rattus norvegic... [more]
KC1G1_MOUSE3.043e-3160.40Casein kinase I isoform gamma-1 OS=Mus musculus GN... [more]
KC1G1_DANRE3.043e-3157.94Casein kinase I isoform gamma-1 OS=Danio rerio GN=... [more]
KC1G1_MACFA6.780e-3159.41Casein kinase I isoform gamma-1 OS=Macaca fascicul... [more]
KC1G1_HUMAN6.780e-3159.41Casein kinase I isoform gamma-1 OS=Homo sapiens GN... [more]
KC1G3_HUMAN8.854e-3161.39Casein kinase I isoform gamma-3 OS=Homo sapiens GN... [more]
KC1G1_XENLA1.510e-3059.41Casein kinase I isoform gamma-1 OS=Xenopus laevis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YM20FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260234 ID=DY260234; Name=DY260234; organism=Citrus clementina; type=EST; length=1119bp
GCAAAGCAGAACATATGATCTGGAATCTCTTGGATATGTGCTTATGTATT
TTCTCAGGGGAAGTCTTCCCTGGCAGGGATTGAAAGCCCGTACCAAAAAG
CAGAAATATGACAAGATTAGTGAAAAGAAGATGCTTACTCCTATTGAGGT
CCTTTGCAAATCTTATCCTTCAGAATTCACATCATACTTCCACTATTGCC
GGTCATTGCGGTTTGAAGATAAACCAGATTATTCATACTTGAAAAGGCTT
TTCCGCGATCTGTTTATACGAGAAGGTTATCAGTTCGACTATGTTTTTGA
TTGGACTATATTGAAGTATCCGCAGACGGGCTCCAGTTCAAGATCACGAC
CAAGCGGGAAACCAAATTTGAACCCTGCAGGACCATCAGCTGAAAGAGTA
GAGAGGCCTTCAGGACAAGAGGTTCGAGATAGATTCGCTGGTGGAATTGA
GGCCTTTGCAAGACGGAATACATCTGGTCATGGTCTGCATGGTGATCACT
CAAGGCACAAATCTTCAGATGATGTGCCATCATCAAAGGATGTGCAACCT
GATTCAGAAAGGCCTCGCTCCTTGTCTCGAAACAGTAGTTCTTTAAAGAG
GGCTATCATGTCAGGTGGCCGACCAAGCTCATCTGGTGACCATAGTGATA
ATCGGGTCCAGCAGACTGGTCCTCGGCCTCCGGCGTGGTCGTTCTGTCTA
CTACCCCAAAGGGCTCACCTGGGTATGAATCCAATCATCCTCCCTTCCCC
CGTGGTGCAACCCCCAAAATTGGCCCTGATGGAGCCCCTCCGAACTTTAA
CCCCCCCGACATTGGTTTCAGGAAAAAGAAAAAAACCACCAAACTACCGG
GGAAAAGGGATTTTTCCCCCCCAAAAAAAAAAATTTTCTTTGTTTCCTCC
CACCCCAAACCCCCCGCCCCGAAAAGGTTTTCCCCCCTTTTTTTATTGGG
GCACCCTATTTGGGCCCCCCCCCCCCGGCCCCCCCCCCCCCCAAAACCAA
AAAAAACCTCTTGGACTTTTTTCCGGGGATTTCTCCCCTTTTTCTTACCC
GCCCCCCCCCCCCCAAAAAGAAAAAAAACCAAAAGAAGAATTTTTCCCCC
CCCAGGGAATTTTTTTTCC
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