DY260235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NUON_RHOCA (NADH-quinone oxidoreductase subunit N OS=Rhodobacter capsulatus GN=nuoN PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.755e-15 Identity = 48/135 (35.56%), Postives = 73/135 (54.07%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLALRQTR--VKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCWAAGRLPRVSQFGGPKAVL 401 I H + G GT G+ S+L+ + IY +M + FA +L++ + V IA L L+KT+P+ A + +FS AG+PP+ GF +KF + AA+G G ++ VV SVIG + R+ FG A L Sbjct: 302 ISHMGFGLLGLAAGTAAGVESMLLYMTIYIVMNVGTFAFILSMERDGKPVTEIAALNMLSKTDPVKAFALLVLLFSLAGVPPMLGFFAKFAVIKAAIGAGFVWVPVAAVVASVIGAFYYLRIVYFMYFGEKSAPL 436
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NUON_JANSC (NADH-quinone oxidoreductase subunit N OS=Jannaschia sp. (strain CCS1) GN=nuoN PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.699e-15 Identity = 46/129 (35.66%), Postives = 67/129 (51.94%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLALRQT--RVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCWAAGRLPRVSQFG 383 I H + G GT +G+ ++LI + IY M I FA +L + + V I+ L A P A+ + MFS AG+PPL GF K+ + AA+ G +LA GV+ SVIG + R+ + FG Sbjct: 303 ISHMGFALMGLSAGTAQGVEAMLIYMAIYVAMNIGTFAFILTMERNGRHVTEISSLSAFASKEPTKALAILVMMFSLAGVPPLLGFFGKYAVLVAAVDAGLVWLAIAGVIASVIGAFYYIRIVYLMYFG 431
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: M1330_ARATH (Uncharacterized mitochondrial protein AtMg01330 OS=Arabidopsis thaliana GN=AtMg01330 PE=4 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 6.137e-15 Identity = 43/60 (71.67%), Postives = 47/60 (78.33%), Query Frame = 2 Query: 614 VLPAHC*NHPSRARAGPRFRKMKGPQV*IGGYKPPIPLGAENQSTSRCETAFSILFGKER 793 +LPA C N SR GP FRKMKGP+V IGGYK PI LGAEN+STSRC+TAFS L GKER Sbjct: 1 MLPAGCWNDTSRD--GPGFRKMKGPKVEIGGYKFPISLGAENESTSRCDTAFSFLVGKER 58
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NU2C_PROMA (NAD(P)H-quinone oxidoreductase subunit 2 OS=Prochlorococcus marinus GN=ndhB PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.367e-14 Identity = 45/116 (38.79%), Postives = 64/116 (55.17%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCW 347 IG A ++ G CGT EG ++++ + Y M + AFA I+L +T IA L + +P+ + SL + S GIPP+ GF K YLFFA G Y L VG+VTSV+ + Sbjct: 323 IGQAGFVMIGLVCGTEEGYAAMILYMAAYLFMNLGAFACIILFSLRTGSDRIADYAGLYQKDPLITLGLSLCLLSLGGIPPMLGFFGKIYLFFAGWSDGQYLLVIVGLVTSVVSIY 438
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NUON_ANAD2 (NADH-quinone oxidoreductase subunit N OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=nuoN PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.332e-14 Identity = 50/128 (39.06%), Postives = 69/128 (53.91%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEG-----IPSLLIGIFIYALMTIDAFAIVLAL-RQTRVKY-------IAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCW 347 IGHA Y+ G + G + LL + Y I AFA+V AL R+TR + + LA+ P A ++ +FS AG+PP AGF KFY+F AA+G G Y LA +GV+TSV+G + Sbjct: 303 IGHAGYLLVGVVSAVVAGARDKALAGLLFYLAAYTATVIGAFAVVGALERRTRGDFEPADAWDLDRFAGLARRRPALAFAMAVFLFSLAGVPPTAGFIGKFYIFKAAMGAGLYGLAVLGVLTSVLGAY 430
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NU2C_PROMT (NAD(P)H-quinone oxidoreductase subunit 2 OS=Prochlorococcus marinus (strain NATL2A) GN=ndhB PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.332e-14 Identity = 44/116 (37.93%), Postives = 65/116 (56.03%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCW 347 IG A ++ G CGT +G ++++ + Y M + AFA I+L +T I+ L + +P+ + SL + S GIPP+ GF K YLFFA G Y L +VG+VTSVI + Sbjct: 320 IGQAGFVMIGLVCGTEDGFAAMVLYMAAYLFMNLGAFACIILFSIRTGSDQISDYAGLYQKDPLITLGLSLCLLSLGGIPPMLGFFGKIYLFFAGWADGQYLLVTVGLVTSVISIY 435
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NUON1_HERA2 (NADH-quinone oxidoreductase subunit N 1 OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=nuoN1 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 3.046e-14 Identity = 46/117 (39.32%), Postives = 68/117 (58.12%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLAL--RQTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCW 347 I HA Y+ G + +GI + + + Y L + AFA+++AL R V ++ L L K +P+ A+ ++ MFS AG+PP AGF SKF +F AA +LA +GVVTSVI + Sbjct: 313 IAHAGYMLLGVLAASEKGISAFTVYLLAYTLTNLGAFAVLIALENRGMPVFELSDLRGLGKRSPLLALAMTVFMFSLAGVPPTAGFASKFGIFRAAWDANLDYLAIIGVVTSVISAF 429
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NU2C_THEEB (NAD(P)H-quinone oxidoreductase subunit 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=ndhB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 5.196e-14 Identity = 47/136 (34.56%), Postives = 72/136 (52.94%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCWAAGRLPRVSQFGGPKAVLRA 407 IG A ++ GF GT G S+L + +Y M + AF ++L +T I+ L + +P+ + SL + S GIPPLAGF K YLF+A GAY L +G++TSVI + R+ ++ P+ + A Sbjct: 308 IGQAGFVMIGFVVGTEAGYASMLFYLLVYLFMNLGAFTCVILFSLRTGTDQISEYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGAYGLVLLGLLTSVISIYYYIRVVKMMVVKEPQEMSEA 443
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NUON_SPHWW (NADH-quinone oxidoreductase subunit N OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=nuoN PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 6.786e-14 Identity = 47/130 (36.15%), Postives = 71/130 (54.62%), Query Frame = 3 Query: 30 GFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLALRQTR---VKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCWAAGRLPRVSQFGGPKAVLRAP 410 G G+ +G+ + + + +Y MT+ +F VL +R V+ IA L L+++ P A F++ MFS AGIPPL GF KF +F A + G + LA VG+ TSVIG + ++ + F P AP Sbjct: 312 GLAAGSADGVAATMTYMAVYVAMTLGSFICVLQMRGQDGQPVETIASLSGLSRSRPGLAAAFAIFMFSLAGIPPLFGFWPKFLVFDALVRAGFWPLAMVGIATSVIGAFYYLKIVKTIYFDDPAPAEFAP 441
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NU2C_MICAN (NAD(P)H-quinone oxidoreductase subunit 2 OS=Microcystis aeruginosa (strain NIES-843) GN=ndhB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 8.862e-14 Identity = 44/112 (39.29%), Postives = 61/112 (54.46%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSV 335 IG A ++ G GT G S++ + IY M + AFA ++L +T IA L + +P+ + S+ + S GIPPLAGF K YLF+A G Y L VG+VTSV Sbjct: 313 IGQAGFVMIGLTAGTDAGYSSMIFYLLIYLFMNLGAFACVILFALRTGTDQIAEYSGLYQKDPLLTLCLSICLLSLGGIPPLAGFFGKIYLFWAGWQAGLYALVLVGLVTSV 424 The following BLAST results are available for this feature:
BLAST of DY260235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260235 ID=DY260235; Name=DY260235; organism=Citrus clementina; type=EST; length=1038bpback to top |