DY260235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NU2C_SYNPW (NAD(P)H-quinone oxidoreductase subunit 2 OS=Synechococcus sp. (strain WH7803) GN=ndhB PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 7.502e-13 Identity = 43/116 (37.07%), Postives = 62/116 (53.45%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCW 347 IG A ++ G CGT +G ++++ Y M + AFA I+L +T IA L + +P+ + SL + S GIPP+ GF K YLFFA Y L VG++TSVI + Sbjct: 323 IGQAGFVMIGLVCGTEDGFAAMVLYTAAYLFMNLGAFACIILFSIRTGSDRIADYAGLYQKDPLITLGLSLCLLSLGGIPPMLGFFGKIYLFFAGWADHQYVLVVVGLITSVISIY 438
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NU2C_SYNJB (NAD(P)H-quinone oxidoreductase subunit 2 OS=Synechococcus sp. GN=ndhB PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 7.502e-13 Identity = 44/116 (37.93%), Postives = 61/116 (52.59%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAF-AIVLALRQTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCW 347 IG A ++ G GT G SL+ + +Y +M + AF I L +T I L + +P + S+ + S G+PPLAGF K YLF+A GAY L VG+VTSVI + Sbjct: 308 IGQAGFVMIGLVVGTEAGYASLIFYLLVYLVMNLGAFLCITLFSLKTGTDEINEYSGLYQKDPFLTLCLSICLLSLGGLPPLAGFFGKLYLFWAGWQAGAYTLVLVGLVTSVISIY 423
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NU2C_PROMM (NAD(P)H-quinone oxidoreductase subunit 2 OS=Prochlorococcus marinus (strain MIT 9313) GN=ndhB PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 7.502e-13 Identity = 42/116 (36.21%), Postives = 63/116 (54.31%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCW 347 IG A ++ G CGT +G ++++ + Y M + AFA I+L +T I+ L + +P+ + SL + S GIPP+ GF K YLFFA Y L VG+VTSV+ + Sbjct: 323 IGQAGFVMIGLVCGTEDGFAAMVLYMAAYLFMNLGAFACIILFSIRTGSDRISDYAGLYQKDPLITLGLSLCLLSLGGIPPMLGFFGKIYLFFAGWADHQYLLVVVGLVTSVVSIY 438
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NU2C_PROM3 (NAD(P)H-quinone oxidoreductase subunit 2 OS=Prochlorococcus marinus (strain MIT 9303) GN=ndhB PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 7.502e-13 Identity = 42/116 (36.21%), Postives = 63/116 (54.31%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCW 347 IG A ++ G CGT +G ++++ + Y M + AFA I+L +T I+ L + +P+ + SL + S GIPP+ GF K YLFFA Y L VG+VTSV+ + Sbjct: 323 IGQAGFVMIGLVCGTEDGFAAMVLYMAAYLFMNLGAFACIILFSIRTGSDRISDYAGLYQKDPLITLGLSLCLLSLGGIPPMLGFFGKIYLFFAGWADHQYLLVVVGLVTSVVSIY 438
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NU2C_ACAM1 (NAD(P)H-quinone oxidoreductase subunit 2 OS=Acaryochloris marina (strain MBIC 11017) GN=ndhB PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 7.502e-13 Identity = 42/116 (36.21%), Postives = 61/116 (52.59%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCW 347 IG A ++ G GT G S++ + IY M + AF ++L +T I L +P+ + SL + S GIPPLAGF K YLF+A GAY L +G++TSV+ + Sbjct: 310 IGQAGFVMIGLVIGTEAGYASMVFYLLIYLFMNLGAFTCVILFSLRTGTDEIGDYAGLYLKDPLLTLALSLCLLSLGGIPPLAGFFGKLYLFWAGWQAGAYGLVLLGLITSVVSIY 425
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NU2C_SYNPX (NAD(P)H-quinone oxidoreductase subunit 2 OS=Synechococcus sp. (strain WH8102) GN=ndhB PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 9.798e-13 Identity = 41/116 (35.34%), Postives = 63/116 (54.31%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCW 347 IG A ++ G CGT +G ++++ + Y M + AFA I+L +T I+ L + +P+ + SL + S GIPP+ GF K YLFFA Y L VG++TSV+ + Sbjct: 323 IGQAGFVMIGMVCGTEDGFAAMVLYMAAYLFMNLGAFACIILFSIRTGSDRISDYAGLYQKDPLITLGLSLCLLSLGGIPPMLGFFGKIYLFFAGWADHQYLLVVVGLITSVVSIY 438
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NUON_SPHAL (NADH-quinone oxidoreductase subunit N OS=Sphingopyxis alaskensis GN=nuoN PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.671e-12 Identity = 43/118 (36.44%), Postives = 65/118 (55.08%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLALRQ---TRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCW 347 I + ++ G GT +G+ +L + +Y + T+ AF +VL LR +V+ I L L++ P A S+ +FS AGIPPL GF K+ +F AA+ LA G+V SVIG + Sbjct: 298 INNVGFMLIGLAAGTQQGVEGVLTYLLVYLVTTLGAFLVVLQLRDEGGNQVESIPALAGLSQRRPGLAAAMSVFLFSLAGIPPLFGFWPKYLVFEAAVNANLVPLAVAGIVASVIGAF 415
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NU2C_NEPOL (NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Nephroselmis olivacea GN=ndhB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.671e-12 Identity = 43/116 (37.07%), Postives = 60/116 (51.72%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLALR-QTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCW 347 +G A + G + +G SL++ + IY M + AFA V+ +T I L +P A+ SL + S GIPPLAGF K YLF AA G Y L VG++TSV+ + Sbjct: 317 VGQAGVMMIGMLTDSPDGYASLIVYLLIYLFMNLGAFACVILFGLRTGTDQIQDYSGLLARDPFLALCLSLCLLSLGGIPPLAGFFGKMYLFLAAWDAGQYSLVWVGLITSVVSIY 432
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NUON_BEUC1 (NADH-quinone oxidoreductase subunit N OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=nuoN PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.183e-12 Identity = 47/146 (32.19%), Postives = 71/146 (48.63%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLALRQ--------TRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCWAAGRLPRVSQFGGPKAVLRAPDT 416 + HA ++ G + EGI S+ + Y L TI AFA+V +R+ ++A L + +P+ A F+L + S+AGIP +GF KF F AA+ GA+ L VGV+ S + R+ + F P AP T Sbjct: 344 VAHAGFLLVGVVAMSPEGISSVFFYLLAYGLATIGAFALVALVRERDAEGNVTAEASHLAQWAGLGRRSPVVATVFALYLLSFAGIPLTSGFVGKFVAFAAAIDGGAWPLVVVGVLASAAAAFFYVRIIVLMFFTSPAEEAGAPST 489
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NUON3_STRGG (NADH-quinone oxidoreductase subunit N 3 OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=nuoN3 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.851e-12 Identity = 48/136 (35.29%), Postives = 74/136 (54.41%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLALRQ-----TRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCWAAGRLPRVSQFGGPKA 395 I HA +I G + EGI S+L + Y+ +T+ AFA+V +R T + AGLG + +P+ A F++ + ++AGIP +GF KF +F AA GA L VGV++S + + R+ + F PKA Sbjct: 377 IAHAGFILAGVIAASPEGISSVLFYLLAYSFVTVGAFAVVTLVRDAGGEATHLSKWAGLG---RRSPLVAAVFAVFLLAFAGIPLTSGFSGKFAVFKAAAEGGAGALVVVGVLSSAVAAFFYIRVIVLMFFSEPKA 509 The following BLAST results are available for this feature:
BLAST of DY260235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260235 ID=DY260235; Name=DY260235; organism=Citrus clementina; type=EST; length=1038bpback to top |