DY260235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NUON_SALRD (NADH-quinone oxidoreductase subunit N OS=Salinibacter ruber (strain DSM 13855) GN=nuoN PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.152e-11 Identity = 37/119 (31.09%), Postives = 59/119 (49.58%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLAL----RQTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCW 347 I HA Y+ G GT G L + +YA+M I AF ++ L ++ R + ++ L +A P+ T + M S G PPL GF K+ +F A+ G +L +GV+ S + + Sbjct: 308 IAHAGYLLVGLSAGTSAGYAGALFYLLVYAVMNIGAFGVMSMLEWDGKEGREQTLSSLAGIANDRPVLGSTMGVFMLSLIGFPPLGGFIGKYLVFAPAVDAGLTWLVVIGVLMSALSAY 426
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NUON_CLOB8 (NADH-quinone oxidoreductase subunit N OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=nuoN PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.152e-11 Identity = 44/128 (34.38%), Postives = 65/128 (50.78%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLAL-RQTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCWAAGRLPRVSQFG 383 I A Y G + GI S+L+ Y + AF +V+A+ + T I LAK +P A +++ S AGIPPLAGF KFYLF + + G +LA + + SVI + ++ +V FG Sbjct: 296 ISQAGYFLLGIIANSSLGIASILLYSLFYLFANMGAFGVVIAVSKATGNDQIKDYAYLAKRSPFLAAVMLISLLSLAGIPPLAGFIGKFYLFLSIIEKGQIWLAFLSIGMSVISVYYYLKVVKVMYFG 423
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NUON2_ACIC5 (NADH-quinone oxidoreductase subunit N 2 OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=nuoN2 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.152e-11 Identity = 39/116 (33.62%), Postives = 63/116 (54.31%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLALRQTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAAL----GCGAYFLASVGVVTSVI 338 IGHA Y+ G T + + +LL +F YAL + AF ++ L + ++ L L++ +P + + + S AGIPPL GF +KF+LF AAL G +L + ++ SV+ Sbjct: 323 IGHAGYLLLGLIAHTPQSLAALLYYVFTYALAVLGAFGVLAILETNGIDSLSSLAGLSRRSPALSACLLVFLLSLAGIPPLVGFFAKFWLFAAALQAAPAFGLLWLVILAILMSVV 438
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NU2C_PROM5 (NAD(P)H-quinone oxidoreductase subunit 2 OS=Prochlorococcus marinus (strain MIT 9515) GN=ndhB PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.152e-11 Identity = 39/116 (33.62%), Postives = 62/116 (53.45%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCW 347 IG A ++ G GT +G+ + ++ + Y M + AF+ ++L +T I+ L + +P+ + SL + S G+PP+ GF K YLFFA Y L VG+VTSVI + Sbjct: 308 IGQAGFVMIGIVSGTQDGLSAAVLYLAAYLFMNLGAFSCVILFSLRTGSDRISDYSGLYQKDPLITLGLSLCLLSLGGLPPMLGFFGKIYLFFAGWANHQYLLVVVGLVTSVISIY 423
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NU2C_CYAA5 (NAD(P)H-quinone oxidoreductase subunit 2 OS=Cyanothece sp. (strain ATCC 51142) GN=ndhB PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.152e-11 Identity = 39/116 (33.62%), Postives = 61/116 (52.59%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCW 347 IG A ++ G GT G S++ + +Y M + AF+ ++L +T I+ L + +P+ + SL + S GIPPLAGF K YLF+A Y L + +VTSV+ + Sbjct: 313 IGQAGFVMIGLTAGTDAGYSSMVFYLLVYLFMNLGAFSGVILFSLRTGTDQISEYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAELYGLVLLALVTSVVSIY 428
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NUON_MAGSM (NADH-quinone oxidoreductase subunit N OS=Magnetococcus sp. (strain MC-1) GN=nuoN PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.117e-11 Identity = 40/116 (34.48%), Postives = 60/116 (51.72%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLALRQTRV-KYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCW 347 IGH Y G G G ++L+ + IY M + AF ++L L + I L+ P A+ ++ MFS AGIPPLAGF +K +F AA+ Y +A +GV+ S + + Sbjct: 309 IGHVGYALIGLAVGNQMGYEAVLVYLTIYIFMNVGAFGLILVLNKEGFGDQIEDYKGLSAKRPGLALLMAIFMFSMAGIPPLAGFMAKLQIFMAAIDAHMYTVAILGVLFSAVSAF 424
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NUON_ERYLH (NADH-quinone oxidoreductase subunit N OS=Erythrobacter litoralis (strain HTCC2594) GN=nuoN PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.117e-11 Identity = 40/118 (33.90%), Postives = 62/118 (52.54%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLALRQ---TRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCW 347 I + +I G T+ G+ ++L + IY +M + +F +L L+ T ++ + L+ T P A MFS AGIPPL GF KF +F AA+ LA++G+ SVIG + Sbjct: 307 INNVGFILIGLAASTVAGLSAMLTYLAIYVVMALGSFVALLMLKDEDGTPLETFDDIAGLSTTRPALAWCLLFLMFSLAGIPPLLGFWGKFVVFQAAVQADMVLLAALGIAASVIGAF 424
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NU2C_ZYGCR (NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Zygnema circumcarinatum GN=ndhB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.117e-11 Identity = 41/116 (35.34%), Postives = 56/116 (48.28%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLALR-QTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCW 347 I A Y+ G CG I G ++ + Y M + AF V+ +T I L +P+ A S+ + S AGIPPLAGF K YLF+ G Y L V ++TSVI + Sbjct: 308 ISQAGYLIIGIVCGNIYGYTGMITYMVTYIFMNLGAFGCVILFGLRTGTDQIRDYTGLYLKDPLLAFCLSVCLLSLAGIPPLAGFFGKLYLFWCGWKSGLYLLVYVALITSVISMY 423
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NU2C_SYNP6 (NAD(P)H-quinone oxidoreductase subunit 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ndhB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.117e-11 Identity = 40/116 (34.48%), Postives = 60/116 (51.72%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCW 347 I A ++ G GT G S++ + IY M + FA ++L +T I+ L + +P+ + SL + S GIPPLAGF K YLF+A G Y L + ++TSVI + Sbjct: 309 IAQAGFVMIGLIAGTEAGYSSMVYYLLIYLFMNLGGFACVILFSLRTGTDQISEYAGLYQKDPLVTLGLSLCLLSLGGIPPLAGFFGKLYLFWAGWQAGLYGLVLLALITSVISIY 424
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NU2C_SYNE7 (NAD(P)H-quinone oxidoreductase subunit 2 OS=Synechococcus elongatus (strain PCC 7942) GN=ndhB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.117e-11 Identity = 40/116 (34.48%), Postives = 60/116 (51.72%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCW 347 I A ++ G GT G S++ + IY M + FA ++L +T I+ L + +P+ + SL + S GIPPLAGF K YLF+A G Y L + ++TSVI + Sbjct: 309 IAQAGFVMIGLIAGTEAGYSSMVYYLLIYLFMNLGGFACVILFSLRTGTDQISEYAGLYQKDPLVTLGLSLCLLSLGGIPPLAGFFGKLYLFWAGWQAGLYGLVLLALITSVISIY 424 The following BLAST results are available for this feature:
BLAST of DY260235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260235 ID=DY260235; Name=DY260235; organism=Citrus clementina; type=EST; length=1038bpback to top |