DY260240

Overview
NameDY260240
Unique NameDY260240
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1123
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_PYRHO (Inorganic pyrophosphatase OS=Pyrococcus horikoshii GN=ppa PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.579e-19
Identity = 46/111 (41.44%), Postives = 69/111 (62.16%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYQKNDNKEVAVNEFSPSSAAVEAI 333
            P +Y  IPRT  ED DP D++++M+EP  P   + A+ IGL  MID G+KD K++AV  +DP +K + DI ++P   L EI  FF+ Y++ + KE+ V  +  + AA   I
Sbjct:   53 PVDYGIIPRTWYEDGDPFDIMVIMREPTYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDWKDISDVPKAFLDEIAHFFKRYKELEGKEIIVEGWEGAEAAKREI 163          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_THELI (Inorganic pyrophosphatase OS=Thermococcus litoralis GN=ppa PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 6.000e-19
Identity = 43/111 (38.74%), Postives = 69/111 (62.16%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYQKNDNKEVAVNEFSPSSAAVEAI 333
            P +Y  IP+T  +D+DP D++++M+EP  PG  + A+ IGL  MID G+KD K++AV  +DP +  + DI ++P   L EI  FF+ Y++   KE+ V  +  +  A + I
Sbjct:   53 PVDYGIIPQTWYDDDDPFDIMVIMREPTYPGVLIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFNDWKDISDVPKAFLDEIAHFFQRYKELQGKEIIVEGWENAEKAKQEI 163          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_PYRAB (Inorganic pyrophosphatase OS=Pyrococcus abyssi GN=ppa PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 6.000e-19
Identity = 45/111 (40.54%), Postives = 69/111 (62.16%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYQKNDNKEVAVNEFSPSSAAVEAI 333
            P +Y  IPRT  +D+DP D++++M+EP  P   + A+ IGL  MID G+KD K++AV  +DP +K + DI ++P   L EI  FF+ Y++   KE+ V  +  + AA   I
Sbjct:   53 PVDYGIIPRTWYDDDDPFDIMVIMREPTYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDWKDIDDVPKAFLDEIAHFFKRYKELQGKEIIVEGWEGAEAAKREI 163          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_UREPA (Inorganic pyrophosphatase OS=Ureaplasma parvum GN=ppa PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.337e-18
Identity = 44/101 (43.56%), Postives = 63/101 (62.38%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYQKNDNKEVAVNEF 303
            PHNY F+   L  D D +DVL+   +   PG  + A+ +G M MID GE D K++AV   DP YKH N+ K++P H L+E++ FFE+Y+   NK+V +  F
Sbjct:   39 PHNYGFLKEALDYDGDELDVLVFADQAFQPGIKVPARVLGAMKMIDGGETDTKLLAVIDVDPRYKHINNFKDIPLHWLAEVQDFFENYKNLQNKKVKILGF 139          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_BACST (Inorganic pyrophosphatase OS=Bacillus stearothermophilus GN=ppa PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 6.634e-18
Identity = 40/111 (36.04%), Postives = 61/111 (54.95%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYQKNDNKEVAVNEFSPSSAAVEAI 333
            P  Y ++  TL  D DP+D+L++   P  PGC +  + IG + M+D GE+D K+I V  +DP +     I++LP H+L EI  FFE Y+    K   +  +    AA + I
Sbjct:   44 PAEYGYLQNTLALDGDPLDILVITTNPTFPGCVIDTRVIGYLNMVDSGEEDAKLIGVPVEDPRFDEVRSIEDLPQHKLKEIAHFFERYKDLQGKRTEIGTWEGPEAAAKLI 154          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_BACP3 (Inorganic pyrophosphatase OS=Bacillus PS3 GN=ppa PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.132e-17
Identity = 40/111 (36.04%), Postives = 61/111 (54.95%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYQKNDNKEVAVNEFSPSSAAVEAI 333
            P  Y ++  TL  D DP+D+L++   P  PGC +  + IG + M+D GE+D K+I V  +DP +     I++LP H+L EI  FFE Y+    K   +  +    AA + I
Sbjct:   44 PAEYGYLQNTLALDGDPLDILVITTNPPFPGCVIDTRVIGYLNMVDSGEEDAKLIGVPVEDPRFDEVRSIEDLPQHKLKEIAHFFERYKDLQGKRTEIGTWEGPEAAAKLI 154          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_METMA (Inorganic pyrophosphatase OS=Methanosarcina mazei GN=ppa PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 5.616e-17
Identity = 42/112 (37.50%), Postives = 63/112 (56.25%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYQKNDNKEVAVNEFSPSSAAVEAIQ 336
            P +Y F P TL  D DP+D ++LM EP  PGC +    + ++ M D   +D+KI+ V   DP + +   I+++PPH L EI  FFE Y+  + K+V V  +     A + IQ
Sbjct:   43 PCDYGFFPDTLALDGDPLDAMVLMWEPTFPGCVIDVHPVAMLDMEDDKGRDEKILCVPQRDPLWNYIKTIEQVPPHLLKEITHFFETYKNLERKDVVVYGWRDLETARKVIQ 154          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_PYRKO (Inorganic pyrophosphatase OS=Pyrococcus kodakaraensis GN=ppa PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 7.334e-17
Identity = 42/111 (37.84%), Postives = 67/111 (60.36%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYQKNDNKEVAVNEFSPSSAAVEAI 333
            P +Y  IP+T  +D DP D++++M+EPV P   + A+ IG+M M D G+KD K++AV  +DP +K + DI ++P   L EI  FF+ Y++   K   V  +  +  A + I
Sbjct:   53 PVDYGIIPQTWYDDGDPFDIMVIMREPVYPLTIVEARPIGIMKMEDSGDKDWKVLAVPVEDPYFKDWKDIDDVPKAFLDEIAHFFQRYKELQGKTTTVEGWGNAEEAKKEI 163          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_METAC (Inorganic pyrophosphatase OS=Methanosarcina acetivorans GN=ppa PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.634e-16
Identity = 42/112 (37.50%), Postives = 63/112 (56.25%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYQKNDNKEVAVNEFSPSSAAVEAIQ 336
            P +Y F P TL  D DP+D L+L  EP  PGC +    + L+ M D   +D+KI+ V   DP + +   ++++PPH L EI  FFE Y+  + K V V  +    AAV+ ++
Sbjct:   46 PCDYGFFPDTLALDGDPLDALVLTWEPTFPGCVIDVHPVALLDMKDDKGRDEKILCVPETDPLWNYIETLEQVPPHLLKEIVHFFETYKNLEGKHVIVIGWEGLDAAVDMLR 157          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_HAEIN (Inorganic pyrophosphatase OS=Haemophilus influenzae GN=ppa PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 6.209e-16
Identity = 41/90 (45.56%), Postives = 60/90 (66.67%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKH-YNDIKELPPHRLSEIRRFFEDYQ 267
            P NY FIP+TL ED D +DVL++ ++P+  G FL AK IG+M  +D GE DDKI+ V ADD +  + YN + +LP + + +I   F +Y+
Sbjct:   54 PTNYGFIPQTLDEDGDELDVLLITRQPLATGVFLEAKVIGVMKFVDDGEVDDKIVCVPADDRDTGNAYNSLADLPANLIKQIEFHFNNYK 143          
The following BLAST results are available for this feature:
BLAST of DY260240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
IPYR_PYRHO1.579e-1941.44Inorganic pyrophosphatase OS=Pyrococcus horikoshii... [more]
IPYR_THELI6.000e-1938.74Inorganic pyrophosphatase OS=Thermococcus litorali... [more]
IPYR_PYRAB6.000e-1940.54Inorganic pyrophosphatase OS=Pyrococcus abyssi GN=... [more]
IPYR_UREPA1.337e-1843.56Inorganic pyrophosphatase OS=Ureaplasma parvum GN=... [more]
IPYR_BACST6.634e-1836.04Inorganic pyrophosphatase OS=Bacillus stearothermo... [more]
IPYR_BACP31.132e-1736.04Inorganic pyrophosphatase OS=Bacillus PS3 GN=ppa P... [more]
IPYR_METMA5.616e-1737.50Inorganic pyrophosphatase OS=Methanosarcina mazei ... [more]
IPYR_PYRKO7.334e-1737.84Inorganic pyrophosphatase OS=Pyrococcus kodakaraen... [more]
IPYR_METAC1.634e-1637.50Inorganic pyrophosphatase OS=Methanosarcina acetiv... [more]
IPYR_HAEIN6.209e-1645.56Inorganic pyrophosphatase OS=Haemophilus influenza... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YN04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260240 ID=DY260240; Name=DY260240; organism=Citrus clementina; type=EST; length=1123bp
CCTCATAACTATTTTTTCATCCCTCGCACATTATGTGAAGATAATGATCC
AATGGATGTTTTGATTCTTATGCAGGAGCCAGTCCTTCCCGGATGTTTCC
TGCGGGCCAAGGCTATTGGATTAATGCCCATGATTGATCAGGGAGAAAAA
GATGATAAGATCATTGCAGTTTGTGCCGATGATCCAGAGTATAAGCACTA
CAATGACATCAAAGAGCTTCCCCCTCATCGCCTTTCCGAGATCCGTCGTT
TCTTTGAAGATTACCAGAAAAATGACAACAAGGAGGTAGCAGTTAATGAA
TTTTCACCTTCTTCTGCTGCTGTTGAAGCCATCCAGTACCCCAATGGATC
TTTATGCCCCAGTACATTCTGCACACCCTGAGGCGGTAGGCCCTTCCCTT
CTTTTTTCCCTTGCCCCCCCCCCCTCGATAATCCAGGGCAACACCGTCAA
TTTGAATAAGTTATCTTCCCCAATGTATTTTGAAGGTTAGATAAACCTCA
TGCTTCCCCATTTTGATACTTTTGATGATAATTCTTGCCCTGCCCTTTTG
AACATTTTCCCGAACCAAATGCCCCAACGAATGGTCCCTCCCTCCGCACA
TCCCAACACAACAAAACAAACAAACCCACTTTCCTGTCACAAATTTGTCT
TACAACACACCCCCTCCCCACACCTCCCCCCCCCCCACACCGCCCCTACC
CCCCAAATCAAATCCATTCCTCCCACCCCGCCCGAGCCCCCCATACGGAA
TCCACACCACCTCGTTCTACCCCCCCACCCGCCCCCCCTCCCCCCCTGCC
CCCACCCCCCCCTCGCTCCCCCTCCACCGAAACACAATACTCCCCTCACC
CTACACAAACCCTCCCCAGACGCCACCATACACACGCCCACTTCCTCCCC
GCCCCGGCTCCACCCACCCCCGTTTCTTCAACGGCTCCCCCCTCCCCCAC
CGCACACGCGACCACACCCCCCTCACCCCCCCCCCTCCCACCCCCCACCT
TCCCTCCGCTACCGTTCCCCTCCCCCCCCCCCCCCTCTCCCACTCTCATC
CCCCAACTCCTCATCCCTCTTCTCCCTCTCCCCCCCTTCAACATACACGT
TCTCTTTTCTCCACTCCCCTCCC
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