DY260240

Overview
NameDY260240
Unique NameDY260240
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1123
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_AQUAE (Inorganic pyrophosphatase OS=Aquifex aeolicus GN=ppa PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 8.109e-16
Identity = 44/115 (38.26%), Postives = 68/115 (59.13%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYKHYNDIKELPPHRLSEIRRFFEDYQK-NDNKEVAVNEFSPSSAAVEAIQ 336
            P NY F+P+TL +D DP+DVL++ +EPV+PG  +R + IG++ M D+   D K+IAV  +  DP Y +   +  LP     +I+ FFE Y++    K V V  +     A+E I+
Sbjct:   52 PFNYGFVPQTLADDGDPVDVLVISREPVVPGAVMRCRPIGMLEMRDEAGIDTKVIAVPHEKLDPSYSNIKTVDNLPEIVREKIKHFFEHYKELEPGKWVKVENWKGLQDAIEEIK 166          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_STRCO (Inorganic pyrophosphatase OS=Streptomyces coelicolor GN=ppa PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.383e-15
Identity = 37/89 (41.57%), Postives = 54/89 (60.67%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYQ 267
            P +Y F+  TL ED DP+D L+++ EP  PGC +R +AIG+  M D+   DDK++ V + DP  +H  DI  +      EI+ FFE Y+
Sbjct:   39 PTDYGFVENTLGEDGDPLDALVILDEPTFPGCLIRCRAIGMFRMTDEAGGDDKLLCVPSTDPRVEHLRDIHHVSEFDRLEIQHFFEVYK 127          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_AERPE (Inorganic pyrophosphatase OS=Aeropyrum pernix GN=ppa PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 3.082e-15
Identity = 45/115 (39.13%), Postives = 68/115 (59.13%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYKHYNDIKELPPHRLSEIRRFFEDYQK-NDNKEVAVNEFSPSSAAVEAIQ 336
            P NY FIP TL ED DP+DVL++ +EPV PG  + A  + ++ M D+   D K++AV     DP +  Y D+ ++P    S+I+ FFE Y++    K V V  + P++ A E I+
Sbjct:   53 PFNYGFIPGTLEEDGDPVDVLVISREPVAPGSLIEAVPVAVLDMEDEEGPDSKVVAVPKAKLDPLFASYKDVGDIPDALKSKIKHFFEHYKELEPGKWVRVTGWRPAADAKEIIR 167          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_SULSO (Inorganic pyrophosphatase OS=Sulfolobus solfataricus GN=ppa PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.025e-15
Identity = 46/115 (40.00%), Postives = 71/115 (61.74%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYKHYNDIKELPPHRLSEIRRFFEDYQK-NDNKEVAVNEFSPSSAAVEAIQ 336
            P NY FIP TL ED DP+DVL+L    ++PG  + A+ IG++ M D+  +D K+IAV  +  DP + + ND+K+LP    ++I  FFE Y++   NK V ++ +   + A E I+
Sbjct:   49 PFNYGFIPETLEEDGDPLDVLVLGNYSLMPGTVIEARPIGMIYMRDEEGEDAKVIAVPRNKTDPSFSNINDVKDLPEAIRNKIVHFFEHYKELEPNKWVKISGWGSVAEAKERIK 163          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_NANEQ (Inorganic pyrophosphatase OS=Nanoarchaeum equitans GN=ppa PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.025e-15
Identity = 48/115 (41.74%), Postives = 67/115 (58.26%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYKHYNDIKELPPHRLSEIRRFFEDYQK-NDNKEVAVNEFSPSSAAVEAIQ 336
            P+NY FIP TL ED DP+DVL++ +EP++PG +++ K IG++   D+   D KIIAV     DP Y    DI EL      +I+ FFE Y++    K V V EF     A + I+
Sbjct:   37 PYNYGFIPETLEEDGDPLDVLVITEEPLVPGSYIKVKPIGVLVTEDEKGVDRKIIAVPVKKVDPIYGEIEDISELKEGIKLKIKHFFERYKELEPGKFVKVKEFLGKEEAEKIIK 151          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_MYCTU (Inorganic pyrophosphatase OS=Mycobacterium tuberculosis GN=ppa PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 5.256e-15
Identity = 36/89 (40.45%), Postives = 55/89 (61.80%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYQ 267
            P +Y FI  TL +D DP+D L+L+ +PV PG  + A+ +G+  M+D+   DDK++ V A DP + H  DI ++P   L  I+ FF  Y+
Sbjct:   39 PTDYGFIEDTLGDDGDPLDALVLLPQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFFVHYK 127          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_MYCBO (Inorganic pyrophosphatase OS=Mycobacterium bovis GN=ppa PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 5.256e-15
Identity = 36/89 (40.45%), Postives = 55/89 (61.80%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYQ 267
            P +Y FI  TL +D DP+D L+L+ +PV PG  + A+ +G+  M+D+   DDK++ V A DP + H  DI ++P   L  I+ FF  Y+
Sbjct:   39 PTDYGFIEDTLGDDGDPLDALVLLPQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFFVHYK 127          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_AQUPY (Inorganic pyrophosphatase OS=Aquifex pyrophilus GN=ppa PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 6.865e-15
Identity = 45/115 (39.13%), Postives = 66/115 (57.39%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYKHYNDIKELPPHRLSEIRRFFEDYQK-NDNKEVAVNEFSPSSAAVEAIQ 336
            P NY FIP+TL +D DP+DVL++ +EPV PG  +R + IG++ M D+   D K+IAV  +  DP Y     + +LP      I+ FFE Y++    K V V  +     A+E I+
Sbjct:   52 PFNYGFIPQTLADDGDPVDVLVISREPVAPGSVMRCRPIGMLEMRDEEGIDTKLIAVPHEKLDPTYSDIKTVDQLPEIIRERIKHFFEHYKELEPGKWVKVENWRGLQDAIEEIK 166          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_THET8 (Inorganic pyrophosphatase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=ppa PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 8.966e-15
Identity = 44/115 (38.26%), Postives = 65/115 (56.52%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYQKNDNKE---VAVNEFSPSSAAVEAIQ 336
            P +Y FIP TL ED DP+D L+L   P+LPG  +  + +GL+ M D+   D K+I V A+D    H  DI ++P     EI+ FFE Y+  + K+   V V  +    AA+E ++
Sbjct:   53 PGDYGFIPSTLAEDGDPLDGLVLSTYPLLPGVVVEVRVVGLLLMEDEKGGDAKVIGVVAEDQRLDHIQDIGDVPEGVKQEIQHFFETYKALEAKKGKWVKVTGWRDRKAALEEVR 167          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_LEIXX (Inorganic pyrophosphatase OS=Leifsonia xyli subsp. xyli GN=ppa PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 8.966e-15
Identity = 39/113 (34.51%), Postives = 65/113 (57.52%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYQK-NDNKEVAVNEFSPSSAAVEAIQ 336
            P +Y F   TL +D DP+DVL+L++ PV PG  ++ + +G++ M D+   D KIIAV   DP ++H  D+ ++P +   EI  FF  Y+     K V +  +  ++ A + +Q
Sbjct:   40 PADYGFFENTLGDDGDPLDVLVLLEYPVFPGVGIKVRPVGVLKMSDEAGGDAKIIAVQHKDPRWQHIQDVNDIPEYTRKEIEHFFARYKDLEPGKFVTIEGWGDAAEAEKIVQ 152          
The following BLAST results are available for this feature:
BLAST of DY260240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
IPYR_AQUAE8.109e-1638.26Inorganic pyrophosphatase OS=Aquifex aeolicus GN=p... [more]
IPYR_STRCO1.383e-1541.57Inorganic pyrophosphatase OS=Streptomyces coelicol... [more]
IPYR_AERPE3.082e-1539.13Inorganic pyrophosphatase OS=Aeropyrum pernix GN=p... [more]
IPYR_SULSO4.025e-1540.00Inorganic pyrophosphatase OS=Sulfolobus solfataric... [more]
IPYR_NANEQ4.025e-1541.74Inorganic pyrophosphatase OS=Nanoarchaeum equitans... [more]
IPYR_MYCTU5.256e-1540.45Inorganic pyrophosphatase OS=Mycobacterium tubercu... [more]
IPYR_MYCBO5.256e-1540.45Inorganic pyrophosphatase OS=Mycobacterium bovis G... [more]
IPYR_AQUPY6.865e-1539.13Inorganic pyrophosphatase OS=Aquifex pyrophilus GN... [more]
IPYR_THET88.966e-1538.26Inorganic pyrophosphatase OS=Thermus thermophilus ... [more]
IPYR_LEIXX8.966e-1534.51Inorganic pyrophosphatase OS=Leifsonia xyli subsp.... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YN04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260240 ID=DY260240; Name=DY260240; organism=Citrus clementina; type=EST; length=1123bp
CCTCATAACTATTTTTTCATCCCTCGCACATTATGTGAAGATAATGATCC
AATGGATGTTTTGATTCTTATGCAGGAGCCAGTCCTTCCCGGATGTTTCC
TGCGGGCCAAGGCTATTGGATTAATGCCCATGATTGATCAGGGAGAAAAA
GATGATAAGATCATTGCAGTTTGTGCCGATGATCCAGAGTATAAGCACTA
CAATGACATCAAAGAGCTTCCCCCTCATCGCCTTTCCGAGATCCGTCGTT
TCTTTGAAGATTACCAGAAAAATGACAACAAGGAGGTAGCAGTTAATGAA
TTTTCACCTTCTTCTGCTGCTGTTGAAGCCATCCAGTACCCCAATGGATC
TTTATGCCCCAGTACATTCTGCACACCCTGAGGCGGTAGGCCCTTCCCTT
CTTTTTTCCCTTGCCCCCCCCCCCTCGATAATCCAGGGCAACACCGTCAA
TTTGAATAAGTTATCTTCCCCAATGTATTTTGAAGGTTAGATAAACCTCA
TGCTTCCCCATTTTGATACTTTTGATGATAATTCTTGCCCTGCCCTTTTG
AACATTTTCCCGAACCAAATGCCCCAACGAATGGTCCCTCCCTCCGCACA
TCCCAACACAACAAAACAAACAAACCCACTTTCCTGTCACAAATTTGTCT
TACAACACACCCCCTCCCCACACCTCCCCCCCCCCCACACCGCCCCTACC
CCCCAAATCAAATCCATTCCTCCCACCCCGCCCGAGCCCCCCATACGGAA
TCCACACCACCTCGTTCTACCCCCCCACCCGCCCCCCCTCCCCCCCTGCC
CCCACCCCCCCCTCGCTCCCCCTCCACCGAAACACAATACTCCCCTCACC
CTACACAAACCCTCCCCAGACGCCACCATACACACGCCCACTTCCTCCCC
GCCCCGGCTCCACCCACCCCCGTTTCTTCAACGGCTCCCCCCTCCCCCAC
CGCACACGCGACCACACCCCCCTCACCCCCCCCCCTCCCACCCCCCACCT
TCCCTCCGCTACCGTTCCCCTCCCCCCCCCCCCCCTCTCCCACTCTCATC
CCCCAACTCCTCATCCCTCTTCTCCCTCTCCCCCCCTTCAACATACACGT
TCTCTTTTCTCCACTCCCCTCCC
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