DY260240

Overview
NameDY260240
Unique NameDY260240
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1123
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_BUCBP (Inorganic pyrophosphatase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=ppa PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 7.104e-12
Identity = 41/100 (41.00%), Postives = 55/100 (55.00%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIA-----VCADDPEYKHYNDIKELPPHRLSEIRRFFEDYQKNDNKE 285
            P NY FI +T   D DP+DVL+    P+LPG  +R K IG++ M D+  +D KIIA     VC    EY   NDI  L P    +I  FF+ Y+  +N +
Sbjct:   53 PCNYGFINKTKSNDGDPLDVLVHTPYPILPGSIIRCKPIGVLNMFDESGEDYKIIAIPHPKVCL---EYSSINDICHLSPTLKQQIIHFFKHYKNLENNK 149          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_YERPE (Inorganic pyrophosphatase OS=Yersinia pestis GN=ppa PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.212e-11
Identity = 39/110 (35.45%), Postives = 63/110 (57.27%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYKHYNDIKELPPHRLSEIRRFFEDYQK-NDNKEVAVNEFSPSSAA 321
            P NY +I  TL  D DP+DVL+    P+ PG  +R + +G++ M D+  +D K++AV       EY H  D+++LP    ++I+ FFE Y+     K V V+ +  ++AA
Sbjct:   53 PCNYGYINNTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLTKEYDHVKDVQDLPELLKAQIKHFFEHYKDLETGKWVKVDGWEDAAAA 162          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_VIBVY (Inorganic pyrophosphatase OS=Vibrio vulnificus (strain YJ016) GN=ppa PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.212e-11
Identity = 39/114 (34.21%), Postives = 63/114 (55.26%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYKHYNDIKELPPHRLSEIRRFFEDYQK-NDNKEVAVNEFSPSSAAVEAI 333
            P NY ++  TL  D DP+DVL+    P++PG  +R + +G++ M D+  +D K++AV       EY H  D+ +LP    ++I  FFE Y++    K V V+ +    AA + I
Sbjct:   53 PCNYGYVNHTLSLDGDPVDVLVPTPYPLMPGSVIRCRPVGVLKMTDESGEDAKVVAVPHSKLSKEYDHIQDVNDLPELLKAQITHFFERYKELESGKWVKVDGWEDVEAARKEI 166          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_VIBVU (Inorganic pyrophosphatase OS=Vibrio vulnificus GN=ppa PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.212e-11
Identity = 39/114 (34.21%), Postives = 63/114 (55.26%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYKHYNDIKELPPHRLSEIRRFFEDYQK-NDNKEVAVNEFSPSSAAVEAI 333
            P NY ++  TL  D DP+DVL+    P++PG  +R + +G++ M D+  +D K++AV       EY H  D+ +LP    ++I  FFE Y++    K V V+ +    AA + I
Sbjct:   53 PCNYGYVNHTLSLDGDPVDVLVPTPYPLMPGSVIRCRPVGVLKMTDESGEDAKVVAVPHSKLSKEYDHIQDVNDLPELLKAQITHFFERYKELESGKWVKVDGWEDVEAARKEI 166          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_VIBCH (Inorganic pyrophosphatase OS=Vibrio cholerae GN=ppa PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.212e-11
Identity = 37/110 (33.64%), Postives = 63/110 (57.27%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYKHYNDIKELPPHRLSEIRRFFEDYQK-NDNKEVAVNEFSPSSAA 321
            P NY ++  TL  D DP+DVL+    P++PG  +R + +G++ M D+  +D K++AV       EY H  D+ +LP    ++I  FFE Y++    K V V+ +  +++A
Sbjct:   53 PCNYGYVNHTLSLDGDPVDVLVPTPYPLIPGSVIRCRPVGVLKMTDESGEDAKVVAVPHTKISKEYDHIQDVNDLPALLKAQITHFFERYKELESGKWVKVDGWEDAASA 162          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_RICFE (Inorganic pyrophosphatase OS=Rickettsia felis GN=ppa PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.212e-11
Identity = 36/91 (39.56%), Postives = 53/91 (58.24%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYKHYNDIKELPPHRLSEIRRFFEDYQ 267
            P NY FIP TL  D DP+DVL++   PV+PG  ++ +A+G++ M D+   D+KIIAV     D  + H  ++ +L       I  FFE Y+
Sbjct:   52 PCNYGFIPHTLSNDGDPVDVLVVAHHPVVPGSVIKCRAVGVLMMEDESGLDEKIIAVPTSKLDITFDHIKELDDLCEMLKKRIVHFFEHYK 142          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_RICCN (Inorganic pyrophosphatase OS=Rickettsia conorii GN=ppa PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.212e-11
Identity = 36/91 (39.56%), Postives = 53/91 (58.24%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYKHYNDIKELPPHRLSEIRRFFEDYQ 267
            P NY FIP TL  D DP+DVL++   PV+PG  ++ +A+G++ M D+   D+KIIAV     D  + H  ++ +L       I  FFE Y+
Sbjct:   52 PCNYGFIPHTLSNDGDPVDVLVVAHHPVVPGSVIKCRAVGVLMMEDESGLDEKIIAVPTSKLDITFDHIKELDDLCDMLKQRIVHFFEHYK 142          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_LEGPN (Inorganic pyrophosphatase OS=Legionella pneumophila GN=ppa PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.212e-11
Identity = 40/114 (35.09%), Postives = 61/114 (53.51%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYKHYNDIKELPPHRLSEIRRFFEDYQK-NDNKEVAVNEFSPSSAAVEAI 333
            P NY +IP TL ED DP+DVL++   P++ G  +  +A+G++ M D+   D KI+AV        Y+     +++P H L  I  FF+ Y+   + K V V  +    AA E I
Sbjct:   53 PTNYGYIPNTLSEDGDPVDVLVITPVPLISGAVISCRAVGMLKMTDESGVDAKILAVPTTKLSKMYQSMQTYQDIPQHLLLSIEHFFKHYKDLEEGKWVKVEGWVGPDAAREEI 166          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_RICTY (Inorganic pyrophosphatase OS=Rickettsia typhi GN=ppa PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.583e-11
Identity = 37/91 (40.66%), Postives = 53/91 (58.24%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYKHYNDIKELPPHRLSEIRRFFEDYQ 267
            P NY FIP TL  D DP+DVL++   PV+PG  ++ +AIG++ M D+   D+KIIAV     D  + H  ++ +L       I  FFE Y+
Sbjct:   52 PCNYGFIPDTLSNDGDPVDVLVVAHHPVVPGSVIKCRAIGVLMMEDESGLDEKIIAVPTSKLDITFDHIQELDDLCKMLKKRIVHFFEHYK 142          
BLAST of DY260240 vs. ExPASy Swiss-Prot
Match: IPYR_RICPR (Inorganic pyrophosphatase OS=Rickettsia prowazekii GN=ppa PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.583e-11
Identity = 37/91 (40.66%), Postives = 53/91 (58.24%), Query Frame = 1
Query:    1 PHNYFFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYKHYNDIKELPPHRLSEIRRFFEDYQ 267
            P NY FIP TL  D DP+DVL++   PV+PG  ++ +AIG++ M D+   D+KIIAV     D  + H  ++ +L       I  FFE Y+
Sbjct:   52 PCNYGFIPDTLSNDGDPVDVLVVAHHPVVPGSVIKCRAIGVLMMEDESGLDEKIIAVPTSKLDITFDHIKELDDLCEMLKKRIVHFFEHYK 142          
The following BLAST results are available for this feature:
BLAST of DY260240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
IPYR_BUCBP7.104e-1241.00Inorganic pyrophosphatase OS=Buchnera aphidicola s... [more]
IPYR_YERPE1.212e-1135.45Inorganic pyrophosphatase OS=Yersinia pestis GN=pp... [more]
IPYR_VIBVY1.212e-1134.21Inorganic pyrophosphatase OS=Vibrio vulnificus (st... [more]
IPYR_VIBVU1.212e-1134.21Inorganic pyrophosphatase OS=Vibrio vulnificus GN=... [more]
IPYR_VIBCH1.212e-1133.64Inorganic pyrophosphatase OS=Vibrio cholerae GN=pp... [more]
IPYR_RICFE1.212e-1139.56Inorganic pyrophosphatase OS=Rickettsia felis GN=p... [more]
IPYR_RICCN1.212e-1139.56Inorganic pyrophosphatase OS=Rickettsia conorii GN... [more]
IPYR_LEGPN1.212e-1135.09Inorganic pyrophosphatase OS=Legionella pneumophil... [more]
IPYR_RICTY1.583e-1140.66Inorganic pyrophosphatase OS=Rickettsia typhi GN=p... [more]
IPYR_RICPR1.583e-1140.66Inorganic pyrophosphatase OS=Rickettsia prowazekii... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YN04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260240 ID=DY260240; Name=DY260240; organism=Citrus clementina; type=EST; length=1123bp
CCTCATAACTATTTTTTCATCCCTCGCACATTATGTGAAGATAATGATCC
AATGGATGTTTTGATTCTTATGCAGGAGCCAGTCCTTCCCGGATGTTTCC
TGCGGGCCAAGGCTATTGGATTAATGCCCATGATTGATCAGGGAGAAAAA
GATGATAAGATCATTGCAGTTTGTGCCGATGATCCAGAGTATAAGCACTA
CAATGACATCAAAGAGCTTCCCCCTCATCGCCTTTCCGAGATCCGTCGTT
TCTTTGAAGATTACCAGAAAAATGACAACAAGGAGGTAGCAGTTAATGAA
TTTTCACCTTCTTCTGCTGCTGTTGAAGCCATCCAGTACCCCAATGGATC
TTTATGCCCCAGTACATTCTGCACACCCTGAGGCGGTAGGCCCTTCCCTT
CTTTTTTCCCTTGCCCCCCCCCCCTCGATAATCCAGGGCAACACCGTCAA
TTTGAATAAGTTATCTTCCCCAATGTATTTTGAAGGTTAGATAAACCTCA
TGCTTCCCCATTTTGATACTTTTGATGATAATTCTTGCCCTGCCCTTTTG
AACATTTTCCCGAACCAAATGCCCCAACGAATGGTCCCTCCCTCCGCACA
TCCCAACACAACAAAACAAACAAACCCACTTTCCTGTCACAAATTTGTCT
TACAACACACCCCCTCCCCACACCTCCCCCCCCCCCACACCGCCCCTACC
CCCCAAATCAAATCCATTCCTCCCACCCCGCCCGAGCCCCCCATACGGAA
TCCACACCACCTCGTTCTACCCCCCCACCCGCCCCCCCTCCCCCCCTGCC
CCCACCCCCCCCTCGCTCCCCCTCCACCGAAACACAATACTCCCCTCACC
CTACACAAACCCTCCCCAGACGCCACCATACACACGCCCACTTCCTCCCC
GCCCCGGCTCCACCCACCCCCGTTTCTTCAACGGCTCCCCCCTCCCCCAC
CGCACACGCGACCACACCCCCCTCACCCCCCCCCCTCCCACCCCCCACCT
TCCCTCCGCTACCGTTCCCCTCCCCCCCCCCCCCCTCTCCCACTCTCATC
CCCCAACTCCTCATCCCTCTTCTCCCTCTCCCCCCCTTCAACATACACGT
TCTCTTTTCTCCACTCCCCTCCC
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