DY260245
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260245 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.116e-12 Identity = 44/113 (38.94%), Postives = 65/113 (57.52%), Query Frame = 2 Query: 245 LLFILLLCIT-INKSRAINSDGEALLSFRTAVVSS---DGFLNQWRPEDPDPCNWKGVKCDKNK--RVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNL 565 LL + +LC + + + IN+D + LL + ++V++ D L QW ++ + C+W GV CD RVI L+LT L+G IS G+ D L L+L SNN G IP+ L NL Sbjct: 6 LLLLFILCFSGLGQPGIINNDLQTLLEVKKSLVTNPQEDDPLRQWNSDNINYCSWTGVTCDNTGLFRVIALNLTGLGLTGSISPWFGRFDNLIHLDLSSNNLVGPIPTALSNL 118
BLAST of DY260245 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.713e-12 Identity = 42/126 (33.33%), Postives = 65/126 (51.59%), Query Frame = 2 Query: 245 LLFILLLCITINKSRAINSDGEALLSFRTAVVSSDGFLNQWRPEDPDPCNWKGVKCDKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNLHRVAGI-IPAEQLLERINS 619 LLF LC ++ ++ G+AL + R ++ + L+ W +PC W V CD V +L+L++ SG +S+ +G L+ LK L L N GEIP + GNL + + + QL RI S Sbjct: 15 LLFFACLCSFVSP----DAQGDALFALRISLRALPNQLSDWNQNQVNPCTWSQVICDDKNFVTSLTLSDMNFSGTLSSRVGILENLKTLTLKGNGITGEIPEDFGNLTSLTSLDLEDNQLTGRIPS 136
BLAST of DY260245 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 1.078e-11 Identity = 36/105 (34.29%), Postives = 51/105 (48.57%), Query Frame = 2 Query: 251 FILLLCITINKSRAINSDGEALLSFRTAVVSSDGFLNQWRPEDPDPCNWKGVKCDKNKRVITLSLTNHKLSGPIS-ADLGKLDQLKFLNLHSNNFYGEIPSELGN 562 F LLC +++ G+ALLS+++ + S + W D PCNW GVKC++ V + L L G + L L L L L S N G IP E+G+ Sbjct: 11 FSSLLCFFFIPCFSLDQQGQALLSWKSQLNISGDAFSSWHVADTSPCNWVGVKCNRRGEVSEIQLKGMDLQGSLPVTSLRSLKSLTSLTLSSLNLTGVIPKEIGD 115 HSP 2 Score: 27.335 bits (59), Expect = 1.078e-11 Identity = 20/63 (31.75%), Postives = 25/63 (39.68%), Query Frame = 3 Query: 567 TELQGLSLQSNYLSGSIPXXXXXXXXXXXXXXXXXXXXDYIPPSLGKLQRLITFHVSHN-LSG 752 TEL+ L L N LSG IP +IP +G L L+ + N LSG Sbjct: 117 TELELLDLSDNSLSGDIPVEIFRLKKLKTLSLNTNNLEGHIPMEIGNLSGLVELMLFDNKLSG 179
BLAST of DY260245 vs. ExPASy Swiss-Prot
Match: EFR_ARATH (LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.339e-11 Identity = 45/124 (36.29%), Postives = 67/124 (54.03%), Query Frame = 2 Query: 245 LLFILLLCITINKSRAINSDGEALLSFRTAVVSSDG--FLNQWRPEDPDPCNWKGVKCDKNK-RVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNLHRVAGIIPAEQLLE 607 L +L +CI + +D +ALL F++ V ++ L W P CNW GV C + + RVI+L+L KL+G IS +G L L+ LNL N+F IP ++G L R+ + + LLE Sbjct: 12 LTLLLQVCIFAQARFSNETDMQALLEFKSQVSENNKREVLASWNHSSPF-CNWIGVTCGRRRERVISLNLGGFKLTGVISPSIGNLSFLRLLNLADNSFGSTIPQKVGRLFRLQYLNMSYNLLE 134
BLAST of DY260245 vs. ExPASy Swiss-Prot
Match: RPKL_ARATH (Receptor protein kinase-like protein At4g34220 OS=Arabidopsis thaliana GN=At4g34220 PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 4.012e-11 Identity = 41/125 (32.80%), Postives = 62/125 (49.60%), Query Frame = 2 Query: 245 LLFILLL---CITINKSRAINSDGEALLSFRTAVVSSD-GFLNQWRPEDPDPCNWKGVKCDK--------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNLHRVAGI 583 LLF L+L + +A+N+DG LL+F+ ++++ L W +D PC W GV C + RV +L L N L G I+ DL + L+ L+L SN F G +P + N + I Sbjct: 8 LLFSLVLFHFLFVPTQLQALNTDGVLLLTFKYSILTDPLSVLRNWNYDDATPCLWTGVTCTELGKPNTPDMFRVTSLVLPNKHLLGSITPDLFSIPYLRILDLSSNFFNGSLPDSVFNATELQSI 132 HSP 2 Score: 27.7202 bits (60), Expect = 4.012e-11 Identity = 18/59 (30.51%), Postives = 24/59 (40.68%), Query Frame = 3 Query: 567 TELQGLSLQSNYLSGSIPXXXXXXXXXXXXXXXXXXXXDYIPPSLGKLQRLITFHVSHN 743 TELQ +SL SN LSG +P IP ++ L+ L +S N Sbjct: 127 TELQSISLGSNNLSGDLPKSVNSVTNLQLLNLSANAFTGEIPLNISLLKNLTVVSLSKN 185
BLAST of DY260245 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.805e-11 Identity = 42/116 (36.21%), Postives = 60/116 (51.72%), Query Frame = 2 Query: 254 ILLLCITINKSRAINSDGEALLSFRT-AVVSSDGFLNQWRPEDPDPCNWKGVKCDK-------NKRVIT-LSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNLHRV 574 + LL + + S ++NSDG+ LL + S L+ W D PCNW GV C N V+T L L++ LSG +S +G L L +LNL N G+IP E+GN ++ Sbjct: 20 LFLLTLLVWTSESLNSDGQFLLELKNRGFQDSLNRLHNWNGIDETPCNWIGVNCSSQGSSSSSNSLVVTSLDLSSMNLSGIVSPSIGGLVNLVYLNLAYNALTGDIPREIGNCSKL 135
BLAST of DY260245 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 8.888e-11 Identity = 39/130 (30.00%), Postives = 64/130 (49.23%), Query Frame = 2 Query: 254 ILLLCITIN---KSRAINSDGEALLSFRTAVVSSDGFLNQWRPEDPDPCNWKGVKCDKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNLHRVAGIIPAEQLLERINSK*TGK 634 +LLLC + S N + EAL++ + + G W DPC+W + C + VI L + LSG +S +G L L+ ++L +NN G+IP E+ +L P Q L+ N++ +G+ Sbjct: 15 LLLLCFFVTCSLSSEPRNPEVEALINIKNELHDPHGVFKNWDEFSVDPCSWTMISCSSDNLVIGLGAPSQSLSGTLSGSIGNLTNLRQVSLQNNNISGKIPPEICSL-------PKLQTLDLSNNRFSGE 137 The following BLAST results are available for this feature:
BLAST of DY260245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260245 ID=DY260245; Name=DY260245; organism=Citrus clementina; type=EST; length=1015bpback to top |